CSDB : glyco epitopes

Search for epitope by full structure: partial match

(you can use Graphic editor; a term in CSDB Linear is normalized upon search)

IDs Epitope / Abundance Source organism
ImmuneEpitopeDB 142489
ChEBI 33984		??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Echinococcus granulosus
SugarBind 86
Glytoucan G82576YO
GlyConnect 1898		??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Escherichia coli
Pseudomonas aeruginosa
Vibrio cholerae
ImmuneEpitopeDB 190606
ChEBI 28260		??Gal?

??Gal?
(structure ID 36) has 6194 matches in CSDB

 
ImmuneEpitopeDB 983931
ChEBI 17234		??Glc?

??Glc?
(structure ID 37977) has 6316 matches in CSDB

 
ImmuneEpitopeDB 137472
ChEBI 12936		?DGal?

?DGal?
(structure ID 19152) has 6194 matches in CSDB

 
SugarBind 7
Glytoucan G68158BT
GlyConnect 1492		?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

Actinomyces naeslundii
Actinomyces viscosus
Clostridium botulinum
Entamoeba histolytica
Escherichia coli
Pseudomonas aeruginosa
ImmuneEpitopeDB 141794
ChEBI 4139		?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

 
ImmuneEpitopeDB 146664
ChEBI 17634		?DGlc?

?DGlc?
(structure ID 19016) has 6316 matches in CSDB

 
SugarBind 192
Glytoucan G15021LG
GlyConnect 534		?DGlcp

?DGlcp
(structure ID 35387) has 6316 matches in CSDB

Vibrio cholerae
ImmuneEpitopeDB 142488
ChEBI 24280		?DGlcp

?DGlcp
(structure ID 35387) has 6316 matches in CSDB

 
ImmuneEpitopeDB 151531
ChEBI 47977		?DGlcpN

?DGlcpN
(structure ID 5928) has 6255 matches in CSDB

 
ImmuneEpitopeDB 141807
ChEBI 17315		?DGlcpN

?DGlcpN
(structure ID 5928) has 6255 matches in CSDB

Streptococcus anginosus K214-2K
ImmuneEpitopeDB 144562
ChEBI 18287		?LFuc?

?LFuc?
(structure ID 2125) has 1391 matches in CSDB

Schistosoma mansoni Puerto Rico
ImmuneEpitopeDB 152214
ChEBI 2181		?LFucp

?LFucp
(structure ID 35474) has 1390 matches in CSDB

 
ImmuneEpitopeDB 135813
ChEBI 28009		Ac(1-2)bDGlcpN

Ac(1-2)bDGlcpN
(structure ID 7688) has 4584 matches in CSDB

 
SugarBind 173
Glytoucan G02880JU		Ac(1-2)bDGlcpN(1-3)?DGalp

Ac(1-2)bDGlcpN(1-3)?DGalp
(structure ID 38218) has 691 matches in CSDB

Streptococcus pneumoniae
SugarBind 145
Glytoucan G87727XV		Ac(1-2)bDGlcpN(1-3)bDGalp(1-4)?DGlcp

Ac(1-2)bDGlcpN(1-3)bDGalp(1-4)?DGlcp
(structure ID 38207) has 287 matches in CSDB

Neisseria gonorrhoeae
ImmuneEpitopeDB 142351
ChEBI 61758		Ac(1-2)bDGlcpN(1-3)bDGalp(1-4)bDGlcp

Ac(1-2)bDGlcpN(1-3)bDGalp(1-4)bDGlcp
(structure ID 80) has 276 matches in CSDB

Streptococcus agalactiae 18RS21
ImmuneEpitopeDB 1391966
ChEBI 167892		Ac(1-2)bDGlcpN(1-3)bDGalp(1-4)bDGlcp

Ac(1-2)bDGlcpN(1-3)bDGalp(1-4)bDGlcp
(structure ID 80) has 276 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 144998
ChEBI 17925		aDGlcp

aDGlcp
(structure ID 6213) has 5586 matches in CSDB

 
ImmuneEpitopeDB 174333
ChEBI 63760		aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Arabidopsis thaliana
ImmuneEpitopeDB 136045
ChEBI 42548		aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Human alphaherpesvirus 1
ImmuneEpitopeDB 145669
ChEBI 62181		aLFucp(1-3)[Ac(1-2)]?DGlcpN

aLFucp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 36915) has 345 matches in CSDB

Armoracia rusticana
ImmuneEpitopeDB 150092
ChEBI 62276		aLFucp(1-3)[Ac(1-2)]bDGlcpN

aLFucp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 1097) has 328 matches in CSDB

Schistosoma mansoni
ImmuneEpitopeDB 149557
ChEBI 62287		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]?DGlcpN

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]?DGlcpN
(structure ID 13063) has 125 matches in CSDB

Homo sapiens
SugarBind 157
Glytoucan G01187XC
GlyConnect 3238		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]?DGlcpN

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]?DGlcpN
(structure ID 13063) has 125 matches in CSDB

Norovirus norwalk VA207
ImmuneEpitopeDB 461720
ChEBI 88161		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN
(structure ID 1033) has 125 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 130654
ChEBI 59294		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN
(structure ID 1033) has 125 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 2151203
ChEBI 153716		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)?DGalp

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)?DGalp
(structure ID 38096) has 66 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 147455
ChEBI 62307		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)bDGalp

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)bDGalp
(structure ID 7286) has 65 matches in CSDB

Mus musculus
SugarBind 88
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Escherichia coli
Fusobacterium nucleatum
SugarBind 187
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Toxoplasma gondii
ImmuneEpitopeDB 136044
ChEBI 27667		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Human alphaherpesvirus 1
SugarBind 195
Glytoucan G68158BT		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Yersinia pestis
SugarBind 166
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 165
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 6
Glytoucan G74621DY
GlyConnect 2105		bDGalp(1-4)?DGlcp

bDGalp(1-4)?DGlcp
(structure ID 13296) has 1087 matches in CSDB

Actinomyces viscosus
Actynomyces naeslundii
ImmuneEpitopeDB 142487
ChEBI 17716		bDGalp(1-4)?DGlcp

bDGalp(1-4)?DGlcp
(structure ID 13296) has 1087 matches in CSDB

 
SugarBind 30
Glytoucan G51331BY
GlyConnect 2118		bDGalp(1-4)[Ac(1-2)]?DGlcpN

bDGalp(1-4)[Ac(1-2)]?DGlcpN
(structure ID 15260) has 708 matches in CSDB

Burkholderia cenocepacia
Clostridium botulinum A
Escherichia coli
Fusobacterium nucleatum
Legionella pneumophila
Neisseria gonorrhoeae
Pseudomonas aeruginosa
ImmuneEpitopeDB 140108
ChEBI 60152		bDGalp(1-4)[Ac(1-2)]?DGlcpN

bDGalp(1-4)[Ac(1-2)]?DGlcpN
(structure ID 15260) has 708 matches in CSDB

Neisseria gonorrhoeae
ImmuneEpitopeDB 130646
ChEBI 16153		bDGalp(1-4)[Ac(1-2)]bDGlcpN

bDGalp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 1101) has 649 matches in CSDB

Neisseria gonorrhoeae
ImmuneEpitopeDB 140122
ChEBI 25001		bDGalp(1-4)[Ac(1-2)]bDGlcpN

bDGalp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 1101) has 649 matches in CSDB

Haemophilus ducreyi 35000HP
ImmuneEpitopeDB 130697
ChEBI 59387		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)?DGalp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)?DGalp
(structure ID 36633) has 421 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 137776
ChEBI 59487		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp
(structure ID 1370) has 416 matches in CSDB

Haemophilus ducreyi
ImmuneEpitopeDB 140110
ChEBI 60239		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)?DGlcp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)?DGlcp
(structure ID 6196) has 239 matches in CSDB

Neisseria gonorrhoeae
ImmuneEpitopeDB 150939
ChEBI 62130		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)[Ac(1-2)]?DGlcpN

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)[Ac(1-2)]?DGlcpN
(structure ID 37059) has 115 matches in CSDB

 
ImmuneEpitopeDB 158549
ChEBI 62504		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)?DGlcp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)?DGlcp
(structure ID 37253) has 14 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 149144
ChEBI 61844		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)bDGlcp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)bDGlcp
(structure ID 990) has 228 matches in CSDB

 
ImmuneEpitopeDB 137340
ChEBI 506227		bDGlcpN

bDGlcpN
(structure ID 36717) has 6045 matches in CSDB

 
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