CSDB : glyco epitopes

Search for epitope by full structure: partial match

(you can use Graphic editor; a term in CSDB Linear is normalized upon search)

IDs Epitope / Abundance Source organism
SugarBind 86
Glytoucan G82576YO
GlyConnect 1898		??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Escherichia coli
Pseudomonas aeruginosa
Vibrio cholerae
ImmuneEpitopeDB 142489
ChEBI 33984		??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Echinococcus granulosus
ImmuneEpitopeDB 190606
ChEBI 28260		??Gal?

??Gal?
(structure ID 36) has 6194 matches in CSDB

 
ImmuneEpitopeDB 137472
ChEBI 12936		?DGal?

?DGal?
(structure ID 19152) has 6194 matches in CSDB

 
ImmuneEpitopeDB 137473
ChEBI 28328		?DGal?N

?DGal?N
(structure ID 36724) has 2460 matches in CSDB

Neisseria gonorrhoeae 4505
ImmuneEpitopeDB 141794
ChEBI 4139		?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

 
SugarBind 7
Glytoucan G68158BT
GlyConnect 1492		?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

Actinomyces naeslundii
Actinomyces viscosus
Clostridium botulinum
Entamoeba histolytica
Escherichia coli
Pseudomonas aeruginosa
ImmuneEpitopeDB 144562
ChEBI 18287		?LFuc?

?LFuc?
(structure ID 2125) has 1391 matches in CSDB

Schistosoma mansoni Puerto Rico
ImmuneEpitopeDB 152214
ChEBI 2181		?LFucp

?LFucp
(structure ID 35474) has 1390 matches in CSDB

 
ImmuneEpitopeDB 130648
ChEBI 28037		Ac(1-2)?DGalpN

Ac(1-2)?DGalpN
(structure ID 35674) has 2076 matches in CSDB

Streptococcus sp. A
ImmuneEpitopeDB 885822
IEDB-SRC 457164		Ac(1-2)aDGalpN

Ac(1-2)aDGalpN
(structure ID 9682) has 1144 matches in CSDB

(bacteria)
ImmuneEpitopeDB 141584
ChEBI 40356		Ac(1-2)aDGalpN

Ac(1-2)aDGalpN
(structure ID 9682) has 1144 matches in CSDB

 
ImmuneEpitopeDB 1391961
ChEBI 88142		Ac(1-2)aDGalpN

Ac(1-2)aDGalpN
(structure ID 9682) has 1144 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 152213
ChEBI 60246		Ac(1-2)aDGalpN(1-3)?DGalp

Ac(1-2)aDGalpN(1-3)?DGalp
(structure ID 37086) has 48 matches in CSDB

 
ImmuneEpitopeDB 153205
ChEBI 62335		Ac(1-2)aDGalpN(1-3)bDGalp

Ac(1-2)aDGalpN(1-3)bDGalp
(structure ID 37103) has 40 matches in CSDB

 
ImmuneEpitopeDB 149570
ChEBI 62518		Ac(1-2)aDGalpN(1-3)bDGalp(1-3)[Ac(1-2)]?DGalpN

Ac(1-2)aDGalpN(1-3)bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 37007) has 1 match in CSDB

Homo sapiens
ImmuneEpitopeDB 136906
ChEBI 28061		aDGalp

aDGalp
(structure ID 37) has 4132 matches in CSDB

Trypanosoma cruzi
ImmuneEpitopeDB 151528
ChEBI 61248		aDGalp

aDGalp
(structure ID 37) has 4132 matches in CSDB

 
ImmuneEpitopeDB 144990
ChEBI 60931		aDGalp(1-3)[Ac(1-2)]?DGalpN

aDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 36893) has 76 matches in CSDB

 
ImmuneEpitopeDB 152215
ChEBI 60944		aDGalp(1-3)[Ac(1-2)]aDGalpN

aDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 37087) has 20 matches in CSDB

 
ImmuneEpitopeDB 174333
ChEBI 63760		aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Arabidopsis thaliana
ImmuneEpitopeDB 136045
ChEBI 42548		aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Human alphaherpesvirus 1
SugarBind 154
Glytoucan G66086EX
GlyConnect 121		aLFucp(1-2)?DGalp

aLFucp(1-2)?DGalp
(structure ID 35766) has 344 matches in CSDB

Norovirus norwalk NV
Norovirus norwalk VA387
ImmuneEpitopeDB 153553
ChEBI 62857		aLFucp(1-2)?DGalp

aLFucp(1-2)?DGalp
(structure ID 35766) has 344 matches in CSDB

Homo sapiens
SugarBind 149
Glytoucan G55958KV		aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]?DGalp

aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]?DGalp
(structure ID 37090) has 10 matches in CSDB

Norovirus norwalk BUDS
Norovirus norwalk HV
Norovirus norwalk MOH
Norovirus norwalk MxV
Norovirus norwalk PiV
Norovirus norwalk VA387
ImmuneEpitopeDB 152218
ChEBI 35930		aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]?DGalp

aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]?DGalp
(structure ID 37090) has 10 matches in CSDB

 
ImmuneEpitopeDB 140124
ChEBI 61012		aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]bDGalp

aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]bDGalp
(structure ID 11546) has 10 matches in CSDB

 
ImmuneEpitopeDB 141814
ChEBI 61635		aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]bDGalp(1-3)[Ac(1-2)]?DGalpN

aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 36827) has 1 match in CSDB

Homo sapiens
ImmuneEpitopeDB 461714
ChEBI 88111		aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN

aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 37117) has 1 match in CSDB

Homo sapiens
ImmuneEpitopeDB 153222
ChEBI 62454		aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN

aLFucp(1-2)[Ac(1-2)aDGalpN(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 37117) has 1 match in CSDB

Homo sapiens
ImmuneEpitopeDB 174039
ChEBI 66875		aLFucp(1-2)[aDGalpN(1-3)]?DGalp

aLFucp(1-2)[aDGalpN(1-3)]?DGalp
(structure ID 37329) has 11 matches in CSDB

 
ImmuneEpitopeDB 153554
ChEBI 62859		aLFucp(1-2)[aDGalpN(1-3)]bDGalp

aLFucp(1-2)[aDGalpN(1-3)]bDGalp
(structure ID 37158) has 11 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 150948
ChEBI 61529		aLFucp(1-2)bDGalp

aLFucp(1-2)bDGalp
(structure ID 11545) has 265 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 461719
ChEBI 16124		aLFucp(1-2)bDGalp

aLFucp(1-2)bDGalp
(structure ID 11545) has 265 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 241096
ChEBI 84728		aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]?DGalpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35775) has 46 matches in CSDB

 
ImmuneEpitopeDB 150766
ChEBI 62152		aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 37028) has 36 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 461710
ChEBI 88101		aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 37028) has 36 matches in CSDB

Homo sapiens
SugarBind 195
Glytoucan G68158BT		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Yersinia pestis
SugarBind 88
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Escherichia coli
Fusobacterium nucleatum
SugarBind 187
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Toxoplasma gondii
ImmuneEpitopeDB 136044
ChEBI 27667		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Human alphaherpesvirus 1
SugarBind 165
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 166
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 8
Glytoucan G78436BB
GlyConnect 1947		bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
ImmuneEpitopeDB 134627
ChEBI 546807		bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Helicobacter pylori
SugarBind 24
Glytoucan G78436BB
GlyConnect 1947		bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
Escherichia coli
Fusobacterium nucleatum
SugarBind 23
Glytoucan G78436BB
GlyConnect 1947		bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
Clostridium tetani
ImmuneEpitopeDB 143260
ChEBI 61820		bDGalp(1-3)[Ac(1-2)]aDGalpN

bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 6270) has 170 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 1391963
ChEBI 16117		bDGalp(1-3)[Ac(1-2)]aDGalpN

bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 6270) has 170 matches in CSDB

Homo sapiens
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