CSDB : glyco epitopes

Search for epitope by full structure: partial match

(you can use Graphic editor; a term in CSDB Linear is normalized upon search)

IDs Epitope / Abundance Source organism
ImmuneEpitopeDB 190606
ChEBI 28260		??Gal?

??Gal?
(structure ID 36) has 6194 matches in CSDB

 
ImmuneEpitopeDB 137472
ChEBI 12936		?DGal?

?DGal?
(structure ID 19152) has 6194 matches in CSDB

 
ImmuneEpitopeDB 137473
ChEBI 28328		?DGal?N

?DGal?N
(structure ID 36724) has 2460 matches in CSDB

Neisseria gonorrhoeae 4505
ImmuneEpitopeDB 141794
ChEBI 4139		?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

 
SugarBind 7
Glytoucan G68158BT
GlyConnect 1492		?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

Actinomyces naeslundii
Actinomyces viscosus
Clostridium botulinum
Entamoeba histolytica
Escherichia coli
Pseudomonas aeruginosa
ImmuneEpitopeDB 130648
ChEBI 28037		Ac(1-2)?DGalpN

Ac(1-2)?DGalpN
(structure ID 35674) has 2076 matches in CSDB

Streptococcus sp. A
SugarBind 25
Glytoucan G60859DF		Ac(1-2)bDGalpN(1-4)?DGalp

Ac(1-2)bDGalpN(1-4)?DGalp
(structure ID 38128) has 189 matches in CSDB

Bordetella pertussis
Burkholderia cepacia
Burkholderia cepacia ATCC 13945
Burkholderia cepacia ATCC 25416
Candida albicans
Escherichia coli
Escherichia coli ATCC 6883
Haemophilus influenzae ATCC 33391
Haemophilus influenzae ATCC 9795
Haemophilus parainfluenzae ATCC 33392
Klebsiella pneumoniae 27736
Legionella pneumophila
Pseudomonas aeruginosa
Pseudomonas aeruginosa ATCC 17648
Pseudomonas aeruginosa ATCC 19142
Pseudomonas aeruginosa ATCC 21472
Pseudomonas aeruginosa ATCC 33347
Staphylococcus aureus ATCC 12600
Staphylococcus aureus ATCC 8095
Stenotrophomonas maltophilia ATCC 13637
Streptococus pneumoniae ATCC 27336
Streptococus pneumoniae ATCC 33400
Streptococus pneumoniae ATCC 6303
ImmuneEpitopeDB 149174
ChEBI 26667		Ac(1-5)?XNeup

Ac(1-5)?XNeup
(structure ID 19211) has 490 matches in CSDB

Mus musculus
SugarBind 170
Glytoucan G50850N		Ac(1-5)aXNeup

Ac(1-5)aXNeup
(structure ID 18761) has 485 matches in CSDB

Streptococcus gordonii DL1
SugarBind 171
Glytoucan G50850NI		Ac(1-5)aXNeup

Ac(1-5)aXNeup
(structure ID 18761) has 485 matches in CSDB

Streptococcus gordonii DL1
SugarBind 84
Glytoucan G84034JH		Ac(1-5)aXNeup

Ac(1-5)aXNeup
(structure ID 18761) has 485 matches in CSDB

Escherichia coli
Lactobacillus johnsonii NCC 533
ImmuneEpitopeDB 136794
ChEBI 49026		Ac(1-5)aXNeup

Ac(1-5)aXNeup
(structure ID 18761) has 485 matches in CSDB

Trypanosoma cruzi
ImmuneEpitopeDB 146100
ChEBI 17012		Ac(1-5)aXNeup

Ac(1-5)aXNeup
(structure ID 18761) has 485 matches in CSDB

Mus musculus
SugarBind 172
Glytoucan G50850NI		Ac(1-5)aXNeup

Ac(1-5)aXNeup
(structure ID 18761) has 485 matches in CSDB

Streptococcus gordonii
SugarBind 39
Glytoucan G77824XV
GlyConnect 1561		Ac(1-5)aXNeup(2-3)?DGalp

Ac(1-5)aXNeup(2-3)?DGalp
(structure ID 37054) has 350 matches in CSDB

Alphainfluenzavirus influenza A
Alphainfluenzavirus influenza A H4N6
Alphainfluenzavirus influenza A H5N1
Clostridium botulinum
Escherichia coli
Helicobacter pylori NCTC 11637
Mastadenovirus human_mastadenovirus D
Plasmodium falciparum
ImmuneEpitopeDB 150933
ChEBI 61596		Ac(1-5)aXNeup(2-3)?DGalp

Ac(1-5)aXNeup(2-3)?DGalp
(structure ID 37054) has 350 matches in CSDB

Homo sapiens
SugarBind 68
Glytoucan G30207PZ		Ac(1-5)aXNeup(2-3)bDGalp

Ac(1-5)aXNeup(2-3)bDGalp
(structure ID 11550) has 347 matches in CSDB

Escherichia coli
SugarBind 116
Glytoucan G30207PZ		Ac(1-5)aXNeup(2-3)bDGalp

Ac(1-5)aXNeup(2-3)bDGalp
(structure ID 11550) has 347 matches in CSDB

Helicobacter pylori
SugarBind 70
Glytoucan G56299XO
GlyConnect 978		Ac(1-5)aXNeup(2-3)bDGalp(1-3)[Ac(1-2)]?DGalpN

Ac(1-5)aXNeup(2-3)bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 38155) has 49 matches in CSDB

Escherichia coli
Mycoplasmoides gallisepticum
Mycoplasmoides pneumoniae
Streptococcus mitis
Streptococcus sanguinis
SugarBind 97
Glytoucan G03777BI		Ac(1-5)aXNeup(2-3)bDGalp(1-3)[Ac(1-2)]?DGalpN

Ac(1-5)aXNeup(2-3)bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 38155) has 49 matches in CSDB

Escherichia coli
Streptococcus mitis
Streptococcus sanguinis
ImmuneEpitopeDB 136906
ChEBI 28061		aDGalp

aDGalp
(structure ID 37) has 4132 matches in CSDB

Trypanosoma cruzi
ImmuneEpitopeDB 151528
ChEBI 61248		aDGalp

aDGalp
(structure ID 37) has 4132 matches in CSDB

 
SugarBind 88
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Escherichia coli
Fusobacterium nucleatum
SugarBind 166
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
ImmuneEpitopeDB 136044
ChEBI 27667		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Human alphaherpesvirus 1
SugarBind 187
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Toxoplasma gondii
SugarBind 165
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 195
Glytoucan G68158BT		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Yersinia pestis
ImmuneEpitopeDB 134627
ChEBI 546807		bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Helicobacter pylori
SugarBind 23
Glytoucan G78436BB
GlyConnect 1947		bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
Clostridium tetani
SugarBind 8
Glytoucan G78436BB
GlyConnect 1947		bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
SugarBind 24
Glytoucan G78436BB
GlyConnect 1947		bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
Escherichia coli
Fusobacterium nucleatum
ImmuneEpitopeDB 147450
ChEBI 61243		bDGalp(1-3)[Ac(1-2)]bDGalpN

bDGalp(1-3)[Ac(1-2)]bDGalpN
(structure ID 20947) has 269 matches in CSDB

 
Home Help