Monomer (building block) information

Main representations

 Input: ?XKdop

SweetDB: Kdop

 SNFG:

Atomic structure
There is only one chemically distinct structure:
Carrier residue details
Residue Size Type Abundance Structures WURCSStereocode & Atoms    Description
Kdo oct* ket 4416 2940 A?d1122hProtonation: 00211112 ketodeoxyoctonic acid (3-deoxy-D-manno-oct-2-ulosonic acid)
a-Kdop
?-Kdo?
?-Kdop
a-Kdo?
b-Kdop
b-Kdo?
?-Kdof
b-Kdof
a-Kdof
3120
652
271
250
96
13
9
4
1
1904
638
203
227
89
8
9
4
1
[CH2](O)[C@@H](O)[C@@H](O1)[C@H](O)[C@H](O)[CH2][C@@](O)1[C](=O)(O)02011220aodoodoo
3 variants possible; use an icon →0x011220a?do??oo
[CH2](O)[C@@H](O)[C@@H](O1)[C@H](O)[C@H](O)[CH2][C](O)1[C](=O)(O)0x011220aodoodoo
2 variants possible; use an icon →02011220a?do??oo
[CH2](O)[C@@H](O)[C@@H](O1)[C@H](O)[C@H](O)[CH2][C@](O)1[C](=O)(O)01011220aodoodoo
2 variants possible; use an icon →01011220a?do??oo
[CH2](O)[C@@H](O)[C@@H](O)[C@H](O1)[C@H](O)[CH2][C](O)1[C](=O)(O)0x011220aododooo
[CH2](O)[C@@H](O)[C@@H](O)[C@H](O1)[C@H](O)[CH2][C@](O)1[C](=O)(O)01011220aododooo
[CH2](O)[C@@H](O)[C@@H](O)[C@H](O1)[C@H](O)[CH2][C@@](O)1[C](=O)(O)02011220aododooo
Structures and taxa
  • Display 2890 compounds containing Kdo (carrier residue): part 0, part 1, part 2, part 3
  • Display 2926 compounds that can contain Kdop (specified building block): part 0, part 1, part 2, part 3
  • Display 2128 compounds explicitly containing Kdop (specified building block): part 0, part 1, part 2
  • Distribution of compounds explicitly containing Kdop synthesized in major taxonomic groups, except animals:
    Kingdom: Phylum Compounds with Kdop
    bacteria: Proteobacteria
    .2000 (94.0%)
    bacteria: Chlamydiae
    .88 (4.1%)
    bacteria: Firmicutes
    .22 (1.0%)
    bacteria: Bacteroidetes
    .17 (0.8%)
    bacteria: Fusobacteria
    .8 (0.4%)
    bacteria:
    .8 (0.4%)
    plant: Streptophyta
    .5 (0.2%)

  • Query another monomer:   
    Please provide a structure in CSDB linear encoding. See structure encoding for details.
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