CSDB glycosyltransferase search

3 glycosyltransferase activities have been found.
Please note that CSDB GT database covers only a few species: Arabidopsis thaliana, Escherichia coli, Saccharomyces cerevisiae, Acinetobacter baumannii.

Enzyme / Gene	Activity	Object	References
Enzyme name: GnTI UniProt ID: Q9XGM8.1 CAZy family: GT13 Gene name: CGL1 / AT4G38240 Gene GenBank ID: 829981	Synthesized dimer: bDGlcpN(1-2)aDManp Donor (ID 33944): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 34159): aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo Confirmation methods: in vitro (crude extract), mutation, complementation in CHO cells ID: 1769 Notes: Suggested activity in planta.	Organism (ID 9805): Arabidopsis thaliana Exact full structure is unknown	Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Bencur et al. 2005 DOI: 10.1042/BJ20042091 Strasser et al. 2005 DOI: 10.1042/BJ20041686 von Schaewen et al. 1993 DOI: 10.1104/pp.102.4.1109 Bakker et al. 1999 DOI: 10.1006/bbrc.1999.1117
Enzyme name: GnTII Gene name: AT2G05320 Gene GenBank ID: 815080	Synthesized dimer: bDGlcpN(1-2)aDManp Donor (ID 33944): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 34097): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo Confirmation methods: in vitro (crude extract), mutation ID: 1770 Notes: Suggested activity in planta. Because the addition of the 6-arm 1,2-GlcNAc residue by GnTII is less efficient than the additions of the core 1,2-xylose and 1,3-fucose residues by XylT, FucTA, and FucTB, the amount of the N-glycan with GlcNAcMan3XylFuc(GlcNAc)2 structure is greater than that with (GlcNAc)2Man3XylFuc(GlcNAc)2 structure in plants (see Yoo et al. 2015 (10.1074/jbc.M115.653162)).	Organism (ID 9805): Arabidopsis thaliana Exact full structure is unknown	Strasser et al. 1999 DOI: 10.1023/A:1007127815012 Bencur et al. 2005 DOI: 10.1042/BJ20042091 Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162
Enzyme name: WzyK26 Enzyme GenBank ID: QEA72105.1 Gene name: wzy Gene cluster ID: MF522809.1	Synthesized dimer: bDGlcpN(1-2)aDManp Donor (ID 35177): aDGlcp(1-2)aLRhap(1-3)aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 35178): -2)[aDGlcp(1-2)aLRhap(1-3)]aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3789 Notes: gene cluster name: KL26	Organism (ID 17303,17304): Acinetobacter baumannii KZ-1098, Ab902 Exact full structure is unknown Molecule role: CPS	Kasimova et al. 2021a DOI: 10.1016/j.ijbiomac.2021.09.073

#GTR ID	Enzyme name	Enzyme group	Enzyme Genbank ID	Derived ID mark	Enzyme Uniprot ID	Derived ID mark	CAZY family	Gene name	Gene Genbank ID	Derived ID mark	Gene cluster	Full structure CSDB structure ID	Side product CSDB structure ID	Full structure	Full structure is fragment (0|1)	Synthesized bond	Synthesized bond location (from root ~ subst position)	Donor structure ID	Substrate structure	Confirmation status	Methods used	Notes	Molecule role	Molecule is a model of role (0|1)	Molecule is a precursor of role (0|1)	Main CSDB record ID	Additional CSDB record IDs	CSDB organism IDs	Organism names	Organs and tissues	References (;-separated)
1769	GnTI				Q9XGM8.1		GT13	CGL1 / AT4G38240 	829981			34093		Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn	1	bDGlcpN(1-2)aDManp	5~2	Ac(1-2)?DGlcpN(1-P-P-5)xXnucU	aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn	in vivo	in vitro (crude extract), mutation, complementation in CHO cells	Suggested activity in planta.		0	0			9805	Arabidopsis thaliana 		Yoo et al. 2015 (doi: 10.1074/jbc.M115.653162); Bencur et al. 2005 (doi: 10.1042/BJ20042091); Strasser et al. 2005 (doi: 10.1042/BJ20041686); von Schaewen et al. 1993 (doi: 10.1104/pp.102.4.1109); Bakker et al. 1999 (doi: 10.1006/bbrc.1999.1117)	
1770	GnTII							AT2G05320 	815080			34091		Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn	1	bDGlcpN(1-2)aDManp	5~2	Ac(1-2)?DGlcpN(1-P-P-5)xXnucU	Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn	in vivo	in vitro (crude extract), mutation	Suggested activity in planta. Because the addition of the 6-arm 1,2-GlcNAc residue by GnTII is less efficient than the additions of the core 1,2-xylose and 1,3-fucose residues by XylT, FucTA, and FucTB, the amount of the N-glycan with GlcNAcMan3XylFuc(GlcNAc)2 structure is greater than that with (GlcNAc)2Man3XylFuc(GlcNAc)2 structure in plants (see Yoo et al. 2015 (10.1074/jbc.M115.653162)).		0	0			9805	Arabidopsis thaliana 		Strasser et al. 1999 (doi: 10.1023/A:1007127815012); Bencur et al. 2005 (doi: 10.1042/BJ20042091); Yoo et al. 2015 (doi: 10.1074/jbc.M115.653162)	
3789	WzyK26		QEA72105.1					wzy			MF522809.1	35178		-2)[aDGlcp(1-2)aLRhap(1-3)]aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-	1	bDGlcpN(1-2)aDManp	1~2	aDGlcp(1-2)aLRhap(1-3)aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol	-2)[aDGlcp(1-2)aLRhap(1-3)]aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-	in silico	Sequencing (gene, protein)	gene cluster name: KL26	CPS	0	0			17303,17304	Acinetobacter baumannii KZ-1098, Ab902		Kasimova et al. 2021a (doi: 10.1016/j.ijbiomac.2021.09.073)