CSDB glycosyltransferase search

6 glycosyltransferase activities have been found.
Please note that CSDB GT database covers only a few species: Arabidopsis thaliana, Escherichia coli, Saccharomyces cerevisiae, Acinetobacter baumannii.

Enzyme / Gene	Activity	Object	References
Enzyme name: IRX9 UniProt ID: Q9ZQC6.1 CAZy family: GT43 Gene name: IRX9 / AT2G37090 Gene GenBank ID: 818285	Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 34172): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)xDXyl1N-ol(1-2)xX2NBz Status: evidence in vitro Confirmation methods: in vitro (microsomal membrane preparation), mutation ID: 1783 Notes: IRX9 adds up to 6 Xylp residues to the model substrate. In Fig. 4 Xyl1N-ol residue is erroneously depicted as Lyx1N-ol	Organism (ID 9805): Arabidopsis thaliana Organ/tissue: stem, root, flower Full structure (ID 34173):	Pena et al. 2007 DOI: 10.1105/tpc.106.049320 Brown et al. 2007 DOI: 10.1111/j.1365-313X.2007.03307.x Lee et al. 2007 DOI: 10.1093/pcp/pcm135 Chong et al. 2015 DOI: 10.1016/j.ijbiomac.2015.05.056 Ren et al. 2014 DOI: 10.1371/journal.pone.0105014 Lee et al. 2012 DOI: 10.1093/pcp/pcr158 Lee et al. 2010 DOI: 10.1104/pp.110.155309
Enzyme name: IRX9L / IRX9H UniProt ID: Q9SXC4.2 CAZy family: GT43 Gene name: IRX9L / AT1G27600 Gene GenBank ID: 839652	Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU Status: indirect evidence in vivo Confirmation methods: overespression, complementation ID: 1784 Notes: Suggested activity in planta; overexpression of IRX9H complements the irx9 mutant defects.	Organism (ID 9805): Arabidopsis thaliana Organ/tissue: leaf, flower, root, stem, polen Exact full structure is unknown	Li et al. 2016a DOI: 10.1104/pp.16.00471 Lee et al. 2010 DOI: 10.1104/pp.110.155309 Ren et al. 2014 DOI: 10.1371/journal.pone.0105014 Wu et al. 2010b DOI: 10.1104/pp.110.154971
Enzyme name: IRX10 UniProt ID: Q9FZJ1.1 CAZy family: GT47 Gene name: GUT2 / IRX10 / AT1G27440 Gene GenBank ID: 839635	Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 29796): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp Status: direct evidence in vivo Confirmation methods: in vitro (purified protein), mutation, double mutation with IRX10L ID: 1785	Organism (ID 9805): Arabidopsis thaliana Organ/tissue: root, leaf, stem Full structure (ID 21875): CSDB ID(s): 49520, 49516	Ubeda-Tomas et al. 2007 DOI: 10.1111/j.1399-3054.2006.00817.x Wu et al. 2009 DOI: 10.1111/j.1365-313X.2008.03724.x Brown et al. 2009 DOI: 10.1111/j.1365-313X.2008.03729.x Jensen et al. 2014 DOI: 10.1111/tpj.12641
Enzyme name: IRX10L UniProt ID: Q940Q8.1 CAZy family: GT47 Gene name: GUT1 / AT5G61840 Gene GenBank ID: 836306	Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 33674): aDXylp(1-P-P-5)xXnucU Acceptor (ID 34161): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp Status: evidence in vitro Confirmation methods: double mutation with IRX10L, in vitro (putified protein) ID: 1786 Notes: IRX10L adds up to 7 Xylp residues to the model substrate.	Organism (ID 9805): Arabidopsis thaliana Organ/tissue: root, leaf, shoot, stem Full structure (ID 34175):	Urbanowicz et al. 2014 DOI: 10.1111/tpj.12643 Wu et al. 2009 DOI: 10.1111/j.1365-313X.2008.03724.x Brown et al. 2009 DOI: 10.1111/j.1365-313X.2008.03729.x
Enzyme name: IRX14 UniProt ID: Q8L707.1 CAZy family: GT43 Gene name: IRX14 / AT4G36890 Gene GenBank ID: 829842	Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU Status: direct evidence in vivo Confirmation methods: mutation, coerxpression with IRX9, in vitro (microsomal membrane preparation) ID: 1787 Notes: Successive incorporation of xylosyl residues into the beta-1,4(Xyl)4 acceptor requires co-expression of IRX9 and IRX14.	Organism (ID 9805): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, seed, stem, root Exact full structure is unknown	Brown et al. 2007 DOI: 10.1111/j.1365-313X.2007.03307.x Lee et al. 2012 DOI: 10.1093/pcp/pcr158 Lee et al. 2010 DOI: 10.1104/pp.110.155309 Keppler et al. 2010 DOI: 10.1093/mp/ssq028
Enzyme name: IRX14L / IRX14H UniProt ID: Q9FH90.1 CAZy family: GT43 Gene name: IRX14L / AT5G67230 Gene GenBank ID: 836858	Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU Status: indirect evidence in vivo Confirmation methods: complementation ID: 1788 Notes: Suggested activity in planta; overexpression of I14H complemented the glucuronoxylan defects caused by the irx14 mutation.	Organism (ID 9805): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem, root Exact full structure is unknown	Lee et al. 2010 DOI: 10.1104/pp.110.155309 Keppler et al. 2010 DOI: 10.1093/mp/ssq028

Enzyme name: IRX9
UniProt ID: Q9ZQC6.1

CAZy family: GT43

Gene name: IRX9 / AT2G37090
Gene GenBank ID: 818285

Synthesized dimer: bDXylp(1-4)bDXylp

Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU

Acceptor (ID 34172): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)xDXyl1N-ol(1-2)xX2NBz

Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation), mutation

ID: 1783

Notes: IRX9 adds up to 6 Xylp residues to the model substrate. In Fig. 4 Xyl1N-ol residue
is erroneously depicted as Lyx1N-ol

Organism (ID 9805): Arabidopsis thaliana
Organ/tissue: stem, root, flower

Full structure (ID 34173):

Pena et al. 2007
DOI: 10.1105/tpc.106.049320

Brown et al. 2007
DOI: 10.1111/j.1365-313X.2007.03307.x

Lee et al. 2007
DOI: 10.1093/pcp/pcm135

Chong et al. 2015
DOI: 10.1016/j.ijbiomac.2015.05.056

Ren et al. 2014
DOI: 10.1371/journal.pone.0105014

Lee et al. 2012
DOI: 10.1093/pcp/pcr158

Lee et al. 2010
DOI: 10.1104/pp.110.155309

Enzyme name: IRX9L / IRX9H
UniProt ID: Q9SXC4.2

CAZy family: GT43

Gene name: IRX9L / AT1G27600
Gene GenBank ID: 839652

Synthesized dimer: bDXylp(1-4)bDXylp

Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU

Status: indirect evidence in vivo
Confirmation methods: overespression, complementation

ID: 1784

Notes: Suggested activity in planta; overexpression of IRX9H complements the irx9 mutant
defects.

Organism (ID 9805): Arabidopsis thaliana
Organ/tissue: leaf, flower, root, stem, polen

Exact full structure is unknown

Li et al. 2016a
DOI: 10.1104/pp.16.00471

Lee et al. 2010
DOI: 10.1104/pp.110.155309

Ren et al. 2014
DOI: 10.1371/journal.pone.0105014

Wu et al. 2010b
DOI: 10.1104/pp.110.154971

Enzyme name: IRX10
UniProt ID: Q9FZJ1.1

CAZy family: GT47

Gene name: GUT2 / IRX10 / AT1G27440
Gene GenBank ID: 839635

Synthesized dimer: bDXylp(1-4)bDXylp

Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU

Acceptor (ID 29796): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp

Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, double mutation with IRX10L

ID: 1785

Organism (ID 9805): Arabidopsis thaliana
Organ/tissue: root, leaf, stem

Full structure (ID 21875):

CSDB ID(s): 49520, 49516

Ubeda-Tomas et al. 2007
DOI: 10.1111/j.1399-3054.2006.00817.x

Wu et al. 2009
DOI: 10.1111/j.1365-313X.2008.03724.x

Brown et al. 2009
DOI: 10.1111/j.1365-313X.2008.03729.x

Jensen et al. 2014
DOI: 10.1111/tpj.12641

Enzyme name: IRX10L
UniProt ID: Q940Q8.1

CAZy family: GT47

Gene name: GUT1 / AT5G61840
Gene GenBank ID: 836306

Synthesized dimer: bDXylp(1-4)bDXylp

Donor (ID 33674): aDXylp(1-P-P-5)xXnucU

Acceptor (ID 34161): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp

Status: evidence in vitro
Confirmation methods: double mutation with IRX10L, in vitro (putified protein)

ID: 1786

Notes: IRX10L adds up to 7 Xylp residues to the model substrate.

Organism (ID 9805): Arabidopsis thaliana
Organ/tissue: root, leaf, shoot, stem

Full structure (ID 34175):

Urbanowicz et al. 2014
DOI: 10.1111/tpj.12643

Wu et al. 2009
DOI: 10.1111/j.1365-313X.2008.03724.x

Brown et al. 2009
DOI: 10.1111/j.1365-313X.2008.03729.x

Enzyme name: IRX14
UniProt ID: Q8L707.1

CAZy family: GT43

Gene name: IRX14 / AT4G36890
Gene GenBank ID: 829842

Synthesized dimer: bDXylp(1-4)bDXylp

Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU

Status: direct evidence in vivo
Confirmation methods: mutation, coerxpression with IRX9, in vitro (microsomal membrane preparation)

ID: 1787

Notes: Successive incorporation of xylosyl residues into the beta-1,4(Xyl)4 acceptor requires
co-expression of IRX9 and IRX14.

Organism (ID 9805): Arabidopsis thaliana
Organ/tissue: leaf, flower, silique, seed, stem, root

Exact full structure is unknown

Brown et al. 2007
DOI: 10.1111/j.1365-313X.2007.03307.x

Lee et al. 2012
DOI: 10.1093/pcp/pcr158

Lee et al. 2010
DOI: 10.1104/pp.110.155309

Keppler et al. 2010
DOI: 10.1093/mp/ssq028

Enzyme name: IRX14L / IRX14H
UniProt ID: Q9FH90.1

CAZy family: GT43

Gene name: IRX14L / AT5G67230
Gene GenBank ID: 836858

Synthesized dimer: bDXylp(1-4)bDXylp

Donor (ID 34008): ?DXylp(1-P-P-5)xXnucU

Status: indirect evidence in vivo
Confirmation methods: complementation

ID: 1788

Notes: Suggested activity in planta; overexpression of I14H complemented the glucuronoxylan
defects caused by the irx14 mutation.

Organism (ID 9805): Arabidopsis thaliana
Organ/tissue: leaf, flower, silique, stem, root

Exact full structure is unknown

Lee et al. 2010
DOI: 10.1104/pp.110.155309

Keppler et al. 2010
DOI: 10.1093/mp/ssq028

#GTR ID	Enzyme name	Enzyme group	Enzyme Genbank ID	Derived ID mark	Enzyme Uniprot ID	Derived ID mark	CAZY family	Gene name	Gene Genbank ID	Derived ID mark	Gene cluster	Full structure CSDB structure ID	Side product CSDB structure ID	Full structure	Full structure is fragment (0|1)	Synthesized bond	Synthesized bond location (from root ~ subst position)	Donor structure ID	Substrate structure	Confirmation status	Methods used	Notes	Molecule role	Molecule is a model of role (0|1)	Molecule is a precursor of role (0|1)	Main CSDB record ID	Additional CSDB record IDs	CSDB organism IDs	Organism names	Organs and tissues	References (;-separated)
1783	IRX9				Q9ZQC6.1		GT43	IRX9 / AT2G37090	818285			34173		bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)xDXyl1N-ol(1-2)xX2NBz	0	bDXylp(1-4)bDXylp	7~4	?DXylp(1-P-P-5)xXnucU	bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)xDXyl1N-ol(1-2)xX2NBz	in vitro	in vitro (microsomal membrane preparation), mutation	IRX9 adds up to 6 Xylp residues to the model substrate. In Fig. 4 Xyl1N-ol residue is erroneously depicted as Lyx1N-ol		1	0			9805	Arabidopsis thaliana 	stem, root, flower	Pena et al. 2007 (doi: 10.1105/tpc.106.049320); Brown et al. 2007 (doi: 10.1111/j.1365-313X.2007.03307.x); Lee et al. 2007 (doi: 10.1093/pcp/pcm135); Chong et al. 2015 (doi: 10.1016/j.ijbiomac.2015.05.056); Ren et al. 2014 (doi: 10.1371/journal.pone.0105014); Lee et al. 2012 (doi: 10.1093/pcp/pcr158); Lee et al. 2010 (doi: 10.1104/pp.110.155309)	
1784	IRX9L / IRX9H				Q9SXC4.2		GT43	IRX9L / AT1G27600 	839652			34174		bDXylp(1-4)bDXylp	1	bDXylp(1-4)bDXylp	?~4	?DXylp(1-P-P-5)xXnucU		indirect	overespression, complementation	Suggested activity in planta; overexpression of IRX9H complements the irx9 mutant defects.		0	0			9805	Arabidopsis thaliana 	leaf, flower, root, stem, polen	Li et al. 2016a (doi: 10.1104/pp.16.00471); Lee et al. 2010 (doi: 10.1104/pp.110.155309); Ren et al. 2014 (doi: 10.1371/journal.pone.0105014); Wu et al. 2010b (doi: 10.1104/pp.110.154971)	
1785	IRX10				Q9FZJ1.1		GT47	GUT2 / IRX10 / AT1G27440	839635			21875		bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp	0	bDXylp(1-4)bDXylp	4~4	?DXylp(1-P-P-5)xXnucU	bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp	in vivo	in vitro (purified protein), mutation, double mutation with IRX10L			0	0		49520,49516	9805	Arabidopsis thaliana 	root, leaf, stem	Ubeda-Tomas et al. 2007 (doi: 10.1111/j.1399-3054.2006.00817.x); Wu et al. 2009 (doi: 10.1111/j.1365-313X.2008.03724.x); Brown et al. 2009 (doi: 10.1111/j.1365-313X.2008.03729.x); Jensen et al. 2014 (doi: 10.1111/tpj.12641)	
1786	IRX10L				Q940Q8.1		GT47	GUT1 / AT5G61840 	836306			34175		bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp	0	bDXylp(1-4)bDXylp	6~4	aDXylp(1-P-P-5)xXnucU	bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp	in vitro	double mutation with IRX10L, in vitro (putified protein)	IRX10L adds up to 7 Xylp residues to the model substrate.		0	0			9805	Arabidopsis thaliana 	root, leaf, shoot, stem	Urbanowicz et al. 2014 (doi: 10.1111/tpj.12643); Wu et al. 2009 (doi: 10.1111/j.1365-313X.2008.03724.x); Brown et al. 2009 (doi: 10.1111/j.1365-313X.2008.03729.x)	
1787	IRX14				Q8L707.1		GT43	IRX14 / AT4G36890	829842			34174		bDXylp(1-4)bDXylp	1	bDXylp(1-4)bDXylp	?~4	?DXylp(1-P-P-5)xXnucU		in vivo	mutation, coerxpression with IRX9, in vitro (microsomal membrane preparation)	Successive incorporation of xylosyl residues into the beta-1,4(Xyl)4 acceptor requires co-expression of IRX9 and IRX14.		0	0			9805	Arabidopsis thaliana 	leaf, flower, silique, seed, stem, root	Brown et al. 2007 (doi: 10.1111/j.1365-313X.2007.03307.x); Lee et al. 2012 (doi: 10.1093/pcp/pcr158); Lee et al. 2010 (doi: 10.1104/pp.110.155309); Keppler et al. 2010 (doi: 10.1093/mp/ssq028)	
1788	IRX14L / IRX14H				Q9FH90.1		GT43	IRX14L / AT5G67230	836858			34174		bDXylp(1-4)bDXylp	1	bDXylp(1-4)bDXylp	?~4	?DXylp(1-P-P-5)xXnucU		indirect	complementation	Suggested activity in planta; overexpression of I14H complemented the glucuronoxylan defects caused by the irx14 mutation.		0	0			9805	Arabidopsis thaliana 	leaf, flower, silique, stem, root	Lee et al. 2010 (doi: 10.1104/pp.110.155309); Keppler et al. 2010 (doi: 10.1093/mp/ssq028)