| Enzyme / Gene |
Activity |
Object |
References |
|---|
Enzyme name: WaaA
UniProt ID: P0AC75 
Gene name: waaA / kdtA
Gene GenBank ID: 949048* | Synthesized dimer: aKdo(2-4)aKdo
aXKdo?)
Donor (ID 34415): ?XKdo(2-P-5)xXnucC
Acceptor (ID 34418): l?3HOMyr(1-2)[lXLau(1-3)l?3HOMyr(1-2)[aXKdo(2-6),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P
Status: evidence in vitro
Confirmation methods: in vitro (crude extract)
ID: 2104 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P.
| Organism (ID 23): Escherichia coli K12
Exact full structure is unknownMolecule role (analog of): core | Gronow et al. 2000
DOI: 10.1046/j.1432-1327.2000.01754.x
Gronow et al. 2001
DOI: 10.1177/09680519010070040701
|
Synthesized dimer: aKdo(2-4)aKdo
Donor (ID 34415): ?XKdo(2-P-5)xXnucC
Acceptor (ID 34421): l?3HOMyr(1-2)[l?3HOMyr(1-2)[aXKdo(2-6),P-4),l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P
Status: evidence in vitro
Confirmation methods: in vitro (crude extract, partially purified protein)
ID: 2106 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P.
| Organism (ID 23): Escherichia coli K12
Exact full structure is unknownMolecule role (analog of): core | Gronow et al. 2000
DOI: 10.1046/j.1432-1327.2000.01754.x
Gronow et al. 2001
DOI: 10.1177/09680519010070040701
Belunius et al. 1992
|
#GTR ID Enzyme name Enzyme group Enzyme Genbank ID Derived ID mark Enzyme Uniprot ID Derived ID mark CAZY family Gene name Gene Genbank ID Derived ID mark Gene cluster Full structure CSDB structure ID Side product CSDB structure ID Full structure Full structure is fragment (0|1) Synthesized bond Synthesized bond location (from root ~ subst position) Donor structure ID Substrate structure Confirmation status Methods used Notes Molecule role Molecule is a model of role (0|1) Molecule is a precursor of role (0|1) Main CSDB record ID Additional CSDB record IDs CSDB organism IDs Organism names Organs and tissues References (;-separated)
2104 WaaA P0AC75 waaA / kdtA 949048 * 34403 l?3HOMyr(1-2)[lXLau(1-3)l?3HOMyr(1-2)[aXKdo(2-4)aXKdo(2-6),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P 1 aXKdo?(2-4)aXKdo? 4~4 ?XKdo(2-P-5)xXnucC l?3HOMyr(1-2)[lXLau(1-3)l?3HOMyr(1-2)[aXKdo(2-6),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P in vitro in vitro (crude extract) WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. core 1 0 23 Escherichia coli K12 Gronow et al. 2000 (doi: 10.1046/j.1432-1327.2000.01754.x); Gronow et al. 2001 (doi: 10.1177/09680519010070040701)
2106 WaaA P0AC75 waaA / kdtA 949048 * 34405 l?3HOMyr(1-2)[l?3HOMyr(1-2)[aXKdo(2-4)aXKdo(2-6),P-4),l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P 1 aXKdo?(2-4)aXKdo? 4~4 ?XKdo(2-P-5)xXnucC l?3HOMyr(1-2)[l?3HOMyr(1-2)[aXKdo(2-6),P-4),l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P in vitro in vitro (crude extract, partially purified protein) WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. core 1 0 23 Escherichia coli K12 Gronow et al. 2000 (doi: 10.1046/j.1432-1327.2000.01754.x); Gronow et al. 2001 (doi: 10.1177/09680519010070040701); Belunius et al. 1992 (doi: url: http://www.jbc.org/content/267/14/9988.long)