CSDB glycosyltransferase search

4 glycosyltransferase activities have been found.
Please note that CSDB GT database covers only a few species: Arabidopsis thaliana, Escherichia coli, Saccharomyces cerevisiae, Acinetobacter baumannii.

Enzyme / Gene Activity Object References
Enzyme name: Orf8
UniProt ID: A0A0A8J741

Gene cluster ID: AB812079
Synthesized dimer: bDGlcpN(1-4)bDGlcpA


Status: predicted in silico
Confirmation methods: in silico
ID: 2530
Organism (ID 7179): Escherichia coli O182

Full structure (ID 5461):

CSDB ID(s): 1924, 10876, 117877

Molecule role: O-antigen

Iguchi et al. 2015
DOI: 10.1093/dnares/dsu043
Enzyme name: Orf4
UniProt ID: A0A0A8J775

Gene cluster ID: AB812070
Synthesized dimer: bDGlcpN(1-4)bDGlcpA


Status: predicted in silico
Confirmation methods: in silico
ID: 2638
Organism (ID 6963): Escherichia coli O170

Full structure (ID 12017):

CSDB ID(s): 30672, 11543, 1912, 1407

Molecule role: O-antigen

Shashlov et al. 2015
DOI: 10.1016/j.carres.2015.08.013
Enzyme name: WbsF
UniProt ID: Q8GMJ5
CAZy family: GT2

Gene name: wbsF
Gene cluster ID: AY035396
Synthesized dimer: bDGlcpN(1-4)bDGlcpA


Status: predicted in silico
Confirmation methods: in silico
ID: 2764
Organism (ID 1005): Escherichia coli O91

Full structure (ID 1633):

CSDB ID(s): 30235, 29351, 20701, 11872, 9226, 1597

Molecule role: O-antigen

Kjellberg et al. 1999
DOI: 10.1021/bi9910629
Enzyme name: Gtr43
Enzyme GenBank ID: AIT56460.1
CAZy family: GT2

Gene name: gtr43
Gene cluster ID: JQ684178.2
Synthesized dimer: bDGlcpN(1-4)bDGlcpA


Donor (ID 33944): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU

Acceptor (ID 35089): bDGlcpA(1-3)[<<66%lS3HOBut(1-4)|33%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)
ID: 3678
Notes: inverting GT, gene cluster name: KL20
Organism (ID 7727): Acinetobacter baumannii A388

Exact full structure is unknownCSDB ID(s): 6743, 12621

Molecule role: CPS

Kasimova et al. 2018a
DOI: 10.1093/glycob/cwy074

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