CSDB glycosyltransferase search

5 glycosyltransferase activities have been found.
Please note that CSDB GT database covers only a few species: Arabidopsis thaliana, Escherichia coli, Saccharomyces cerevisiae, Acinetobacter baumannii.

Enzyme / Gene Activity Object References
Enzyme name: WftF
UniProt ID: Q6QNC1
CAZy family: GT4

Gene name: wbtF
Gene cluster ID: AY532664
Synthesized dimer: aDGlcpN(1-4)aDGalpN


Status: predicted in silico
Confirmation methods: in silico
ID: 2819
Organism (ID 4899): Escherichia coli O103

Full structure (ID 9064):

CSDB ID(s): 1842, 30868, 30382, 25457, 21155, 12798

Molecule role: O-antigen

Liu et al. 2010b
DOI: 10.1093/glycob/cwq015
Enzyme name: Gtr49K43
Enzyme GenBank ID: QHB12931.1

Gene name: gtr49
Synthesized dimer: aDGlcpN(1-4)aDGalpN


Donor (ID 33944): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU

Acceptor (ID 34996): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)
ID: 3601
Notes: retaining GT, gene cluster name: KL43, PSgc15; name was augmented to make it unique
Organism (ID 17278,17279,7207): Acinetobacter baumannii NIPH 60, O15, LUH5544

Full structure (ID 2078):

CSDB ID(s): 27749, 29558, 30931, 11361, 486, 6715

Molecule role: CPS

Shashkov et al. 2016c
DOI: 10.1016/j.carres.2016.10.007
Enzyme name: Gtr49K47
Enzyme GenBank ID: QHB12948.1

Gene name: gtr49
Synthesized dimer: aDGlcpN(1-4)aDGalpN


Donor (ID 33944): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU

Acceptor (ID 34996): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)
ID: 3606
Notes: retaining GT, gene cluster name: KL47; name was augmented to make it unique
Organism (ID 17280): Acinetobacter baumannii NIPH 601

Full structure (ID 14651):

CSDB ID(s): 11791, 10940, 6741

Molecule role: CPS

Enzyme name: Gtr49K88
Enzyme GenBank ID: AHB32613.1

Gene name: gtr49
Synthesized dimer: aDGlcpN(1-4)aDGalpN


Donor (ID 33944): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU

Acceptor (ID 35032): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)
ID: 3612
Notes: gene cluster name: KL88, PSgc20; name was augmented to make it unique
Organism (ID 17281): Acinetobacter baumannii LUH5548

Full structure (ID 12452):

CSDB ID(s): 6753, 11792

Molecule role: CPS

Enzyme name: Gtr49K24
Enzyme GenBank ID: APE73824.1

Gene name: gtr49
Gene cluster ID: KX756650
Synthesized dimer: aDGlcpN(1-4)aDGalpN


Donor (ID 33944): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU

Acceptor (ID 35032): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)
ID: 3654
Notes: gene cluster name: KL24; name was augmented to make it unique
Organism (ID 7328): Acinetobacter baumannii RCH51

Full structure (ID 12602):

CSDB ID(s): 6740, 8598, 11922

Molecule role: CPS

Kenyon et al. 2017c
DOI: 10.1099/mic.0.000430

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