CSDB glycosyltransferase search

4 glycosyltransferase activities have been found.
Please note that CSDB GT database covers only a few species: Arabidopsis thaliana, Escherichia coli, Saccharomyces cerevisiae, Acinetobacter baumannii.

Enzyme / Gene	Activity	Object	References
Enzyme name: WbqH UniProt ID: Q84DF9 CAZy family: GT4 Gene name: wbqH Gene cluster ID: AY208937	Synthesized dimer: aDGalpNA(1-4)aDGalpNA Status: predicted in silico Confirmation methods: in silico ID: 2844	Organism (ID 1717): Escherichia coli O121 Full structure (ID 3020): CSDB ID(s): 1861, 115430, 108660, 30313, 28686, 25713, 23071, 20676, 12634, 3991, 2663 Molecule role: O-antigen	Fratamico et al. 2003 DOI: 10.1128/JCM.41.7.3379-3383.2003
Enzyme name: Gtr71 Enzyme GenBank ID: AHB32265.1 Gene name: gtr71 Gene cluster ID: KC526896	Synthesized dimer: aDGalpNA(1-4)aDGalpNA Donor (ID 34936): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 35079): Ac(1-2)[Ac(1-3)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3668 Notes: multifunctional, gene cluster name: KL35, PSgc6	Organism (ID 17288): Acinetobacter baumannii LUH5535 Full structure (ID 12680): CSDB ID(s): 12230, 6746 Molecule role: CPS	Shashkov et al. 2017 DOI: 10.1016/j.carres.2017.05.017
Synthesized dimer: aDGalpNA(1-4)aDGalpNA Donor (ID 34936): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 35080): Ac(1-2)[Ac(1-3)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3669 Notes: multifunctional , gene cluster name: KL35, PSgc6	Organism (ID 17288): Acinetobacter baumannii LUH5535 Full structure (ID 12680): CSDB ID(s): 6746, 12230 Molecule role: CPS
Enzyme name: Gtr39 Enzyme GenBank ID: AIT75780.1 Gene name: gtr39 Gene cluster ID: KC118541.2	Synthesized dimer: aDGalpNA(1-4)aDGalpNA Donor (ID 34936): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 35023): Ac(1-2)aDGalpNA(1-3)bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3735 Notes: gene cluster name: KL17	Organism (ID 17295): Acinetobacter baumannii G7 Exact full structure is unknown Molecule role: CPS	Kenyon et al. 2019b DOI: 10.1016/j.ijbiomac.2019.09.163

#GTR ID	Enzyme name	Enzyme group	Enzyme Genbank ID	Derived ID mark	Enzyme Uniprot ID	Derived ID mark	CAZY family	Gene name	Gene Genbank ID	Derived ID mark	Gene cluster	Full structure CSDB structure ID	Side product CSDB structure ID	Full structure	Full structure is fragment (0|1)	Synthesized bond	Synthesized bond location (from root ~ subst position)	Donor structure ID	Substrate structure	Confirmation status	Methods used	Notes	Molecule role	Molecule is a model of role (0|1)	Molecule is a precursor of role (0|1)	Main CSDB record ID	Additional CSDB record IDs	CSDB organism IDs	Organism names	Organs and tissues	References (;-separated)
2844	WbqH				Q84DF9		GT4	wbqH			AY208937	3020		-3)[Ac(1-2)xXGly(1-4)]bDQuip4N(1-4)[NH2(1-6),60%Ac(1-3),Ac(1-2)]aDGalpNA(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]aDGlcpN(1-	0	aDGalpNA(1-4)aDGalpNA	3~4			in silico	in silico		O-antigen	0	0		1861,115430,108660,30313,28686,25713,23071,20676,12634,3991,2663	1717	Escherichia coli O121		Fratamico et al. 2003 (doi: 10.1128/JCM.41.7.3379-3383.2003)	
3668	Gtr71		AHB32265.1					gtr71			KC526896	12680		-3)[Ac(1-4),Ac(1-2)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-	0	aDGalpNA(1-4)aDGalpNA	3~4	Ac(1-2)?DGalpNA(1-P-P-5)xXnucU	Ac(1-2)[Ac(1-3)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol	in silico	Sequencing (gene, protein)	multifunctional, gene cluster name: KL35, PSgc6	CPS	0	0		12230,6746	17288	Acinetobacter baumannii LUH5535		Shashkov et al. 2017 (doi: 10.1016/j.carres.2017.05.017)	
3669	Gtr71		AHB32265.1					gtr71			KC526896	12680		-3)[Ac(1-4),Ac(1-2)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-	0	aDGalpNA(1-4)aDGalpNA	4~4	Ac(1-2)?DGalpNA(1-P-P-5)xXnucU	Ac(1-2)[Ac(1-3)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol	in silico	Sequencing (gene, protein)	multifunctional , gene cluster name: KL35, PSgc6	CPS	0	0		6746,12230	17288	Acinetobacter baumannii LUH5535		Shashkov et al. 2017 (doi: 10.1016/j.carres.2017.05.017)	
3735	Gtr39		AIT75780.1					gtr39			KC118541.2	35137		-4)[xDAla?(1-6),Ac(1-2)]aDGalpNA(1-4)[Ac(1-2)]aDGalpNA(1-3)bDQuipN4N(1-	1	aDGalpNA(1-4)aDGalpNA	3~4	Ac(1-2)?DGalpNA(1-P-P-5)xXnucU	Ac(1-2)aDGalpNA(1-3)bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol	in silico	Sequencing (gene, protein)	gene cluster name: KL17	CPS	0	0			17295	Acinetobacter baumannii G7		Kenyon et al. 2019b (doi: 10.1016/j.ijbiomac.2019.09.163)