| Enzyme / Gene |
Activity |
Object |
References |
Enzyme name: Gtr56
Enzyme GenBank ID: ALL34863.1
CAZy family: GT52
Gene name: gtr56 | Synthesized dimer: aLegp(2-6)bDGalp
bDGalp)
Donor (ID 35038): Ac(1-5)[Ac(1-7)]?XLegp(2-P-5)xXnucC
Acceptor (ID 35039): bDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol
Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)
ID: 3620 Notes: inverting GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R
| Organism (ID 7098,17282,17283): Acinetobacter baumannii 1432, 4190, NIPH 70
Full structure (ID 12254):
[<<lS3HOBut(1-7)|Ac(1-7)>>,Ac(1-5)]aXLegp(2-6)bDGalp(1-6)[Ac(1-2)aDGlcpN(1-3)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1-&highlight=4~6~aXLeg) CSDB ID(s): 6748, 10926, 11536, 22790Molecule role: CPS | Shashkov et al. 2016d
DOI: 10.1093/glycob/cwv168
|
Synthesized dimer: aLegp(2-6)bDGalp
bDGalp)
Donor (ID 35040): lR3HOBut(1-7)[Ac(1-5)]?XLegp(2-P-5)xXnucC
Acceptor (ID 35039): bDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol
Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)
ID: 3621 Notes: inverting GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R
| Organism (ID 7098,17282,17283): Acinetobacter baumannii 1432, 4190, NIPH 70
Full structure (ID 12254):
[<<lS3HOBut(1-7)|Ac(1-7)>>,Ac(1-5)]aXLegp(2-6)bDGalp(1-6)[Ac(1-2)aDGlcpN(1-3)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1-&highlight=4~6~aXLeg) CSDB ID(s): 6748, 10926, 11536, 22790Molecule role: CPS |
#GTR ID Enzyme name Enzyme group Enzyme Genbank ID Derived ID mark Enzyme Uniprot ID Derived ID mark CAZY family Gene name Gene Genbank ID Derived ID mark Gene cluster Full structure CSDB structure ID Side product CSDB structure ID Full structure Full structure is fragment (0|1) Synthesized bond Synthesized bond location (from root ~ subst position) Donor structure ID Substrate structure Confirmation status Methods used Notes Molecule role Molecule is a model of role (0|1) Molecule is a precursor of role (0|1) Main CSDB record ID Additional CSDB record IDs CSDB organism IDs Organism names Organs and tissues References (;-separated)
3620 Gtr56 ALL34863.1 GT52 gtr56 12254 -4)[<>,Ac(1-5)]aXLegp(2-6)bDGalp(1-6)[Ac(1-2)aDGlcpN(1-3)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1- 0 aXLegp(2-6)bDGalp 4~6 Ac(1-5)[Ac(1-7)]?XLegp(2-P-5)xXnucC bDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol in silico Sequencing (gene, protein) inverting GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R CPS 0 0 6748,10926,11536,22790 7098,17282,17283 Acinetobacter baumannii 1432, 4190, NIPH 70 Shashkov et al. 2016d (doi: 10.1093/glycob/cwv168)
3621 Gtr56 ALL34863.1 GT52 gtr56 12254 -4)[<>,Ac(1-5)]aXLegp(2-6)bDGalp(1-6)[Ac(1-2)aDGlcpN(1-3)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1- 0 aXLegp(2-6)bDGalp 4~6 lR3HOBut(1-7)[Ac(1-5)]?XLegp(2-P-5)xXnucC bDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol in silico Sequencing (gene, protein) inverting GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R CPS 0 0 6748,10926,11536,22790 7098,17282,17283 Acinetobacter baumannii 1432, 4190, NIPH 70 Shashkov et al. 2016d (doi: 10.1093/glycob/cwv168)