CSDB glycosyltransferase search

6 glycosyltransferase activities have been found.
Please note that CSDB GT database covers only a few species: Arabidopsis thaliana, Escherichia coli, Saccharomyces cerevisiae, Acinetobacter baumannii.

Enzyme / Gene	Activity	Object	References
Enzyme name: Gtr48 Enzyme GenBank ID: APE73823.1 Gene name: gtr48 Gene cluster ID: KX756650	Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35033): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3655 Notes: gene cluster name: KL24	Organism (ID 7328): Acinetobacter baumannii RCH51 Full structure (ID 12602): CSDB ID(s): 6740, 8598, 11922 Molecule role: CPS	Kenyon et al. 2017c DOI: 10.1099/mic.0.000430
Enzyme name: Gtr14KL5 Enzyme GenBank ID: CAO99489.1 Gene name: gtr14 Gene cluster ID: CU468230.2	Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35115): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3705 Notes: gene cluster name: KL5; name was augmented to make it unique	Organism (ID 17290): Acinetobacter baumannii SDF Full structure (ID 13579): CSDB ID(s): 22785, 6713, 1366, 1180, 1102 Molecule role: CPS	Arbatsky et al. 2019a DOI: 10.1007/s11172-019-2432-4
Enzyme name: Gtr14K7 Enzyme GenBank ID: APD17030.1 Gene name: gtr14	Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35115): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3709 Notes: gene cluster name: KL7, PSgc1; name was augmented to make it unique	Organism (ID 6966): Acinetobacter baumannii LUH5533 Full structure (ID 12021): CSDB ID(s): 30673, 22786, 6705, 2272, 1367, 963 Molecule role: CPS
Enzyme name: Gtr14KL46 Enzyme GenBank ID: QDF13586.1 Gene name: gtr14 Gene cluster ID: MK609549.1	Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35142): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3740 Notes: gene cluster name: KL46; name was augmented to make it unique	Organism (ID 17296): Acinetobacter baumannii NIPH 329 Full structure (ID 13716): CSDB ID(s): 22780, 21021, 1047 Molecule role: CPS	Kenyon et al. 2019c DOI: 10.1371/journal.pone.0218461
Enzyme name: Gtr14K90 Enzyme GenBank ID: AHB32798.1 Gene name: gtr14 Gene cluster ID: KC526917.1	Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35147): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3747 Notes: gene cluster name: KL90, PSgc26; name was augmented to make it unique	Organism (ID 17268): Acinetobacter baumannii LUH5553 Full structure (ID 13914): CSDB ID(s): 2273, 6704, 22781 Molecule role: CPS	Senchenkova et al. 2019 DOI: 10.1016/j.carres.2019.04.008
Enzyme name: Gtr14KL218 Enzyme GenBank ID: ULK74078.1 Gene name: gtr14 Gene cluster ID: OK493483.1.	Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35142): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico Confirmation methods: Sequencing (gene, protein) ID: 3841 Notes: gene cluster name: KL218; name was augmented to make it unique	Organism (ID 17316): Acinetobacter baumannii 52-249 Full structure (ID 16156): CSDB ID(s): 8487, 22782 Molecule role: CPS	Kasimova et al. 2022a DOI: 10.1016/j.ijbiomac.2022.07.135

Enzyme name: Gtr48
Enzyme GenBank ID: APE73823.1

Gene name: gtr48
Gene cluster ID: KX756650

Synthesized dimer: aDGalp(1-6)aDGlcpN

Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU

Acceptor (ID 35033): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)

ID: 3655

Notes: gene cluster name: KL24

Organism (ID 7328): Acinetobacter baumannii RCH51

Full structure (ID 12602):

CSDB ID(s): 6740, 8598, 11922

Molecule role: CPS

Kenyon et al. 2017c
DOI: 10.1099/mic.0.000430

Enzyme name: Gtr14KL5
Enzyme GenBank ID: CAO99489.1

Gene name: gtr14
Gene cluster ID: CU468230.2

Synthesized dimer: aDGalp(1-6)aDGlcpN

Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU

Acceptor (ID 35115): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)

ID: 3705

Notes: gene cluster name: KL5; name was augmented to make it unique

Organism (ID 17290): Acinetobacter baumannii SDF

Full structure (ID 13579):

CSDB ID(s): 22785, 6713, 1366, 1180, 1102

Molecule role: CPS

Arbatsky et al. 2019a
DOI: 10.1007/s11172-019-2432-4

Enzyme name: Gtr14K7
Enzyme GenBank ID: APD17030.1

Gene name: gtr14

Synthesized dimer: aDGalp(1-6)aDGlcpN

Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU

Acceptor (ID 35115): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)

ID: 3709

Notes: gene cluster name: KL7, PSgc1; name was augmented to make it unique

Organism (ID 6966): Acinetobacter baumannii LUH5533

Full structure (ID 12021):

CSDB ID(s): 30673, 22786, 6705, 2272, 1367, 963

Molecule role: CPS

Enzyme name: Gtr14KL46
Enzyme GenBank ID: QDF13586.1

Gene name: gtr14
Gene cluster ID: MK609549.1

Synthesized dimer: aDGalp(1-6)aDGlcpN

Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU

Acceptor (ID 35142): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)

ID: 3740

Notes: gene cluster name: KL46; name was augmented to make it unique

Organism (ID 17296): Acinetobacter baumannii NIPH 329

Full structure (ID 13716):

CSDB ID(s): 22780, 21021, 1047

Molecule role: CPS

Kenyon et al. 2019c
DOI: 10.1371/journal.pone.0218461

Enzyme name: Gtr14K90
Enzyme GenBank ID: AHB32798.1

Gene name: gtr14
Gene cluster ID: KC526917.1

Synthesized dimer: aDGalp(1-6)aDGlcpN

Donor (ID 33991): ?DGalp(1-P-P-5)xXnucU

Acceptor (ID 35147): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol

Status: predicted in silico
Confirmation methods: Sequencing (gene, protein)

ID: 3747

Notes: gene cluster name: KL90, PSgc26; name was augmented to make it unique

Organism (ID 17268): Acinetobacter baumannii LUH5553

Full structure (ID 13914):

CSDB ID(s): 2273, 6704, 22781

Molecule role: CPS

Senchenkova et al. 2019
DOI: 10.1016/j.carres.2019.04.008

Enzyme name: Gtr14KL218
Enzyme GenBank ID: ULK74078.1

Gene name: gtr14
Gene cluster ID: OK493483.1.

Synthesized dimer: aDGalp(1-6)aDGlcpN

ID: 3841

Notes: gene cluster name: KL218; name was augmented to make it unique

Organism (ID 17316): Acinetobacter baumannii 52-249

Full structure (ID 16156):

CSDB ID(s): 8487, 22782

Molecule role: CPS

Kasimova et al. 2022a
DOI: 10.1016/j.ijbiomac.2022.07.135

#GTR ID	Enzyme name	Enzyme group	Enzyme Genbank ID	Derived ID mark	Enzyme Uniprot ID	Derived ID mark	CAZY family	Gene name	Gene Genbank ID	Derived ID mark	Gene cluster	Full structure CSDB structure ID	Side product CSDB structure ID	Full structure	Full structure is fragment (0|1)	Synthesized bond	Synthesized bond location (from root ~ subst position)	Donor structure ID	Substrate structure	Confirmation status	Methods used	Notes	Molecule role	Molecule is a model of role (0|1)	Molecule is a precursor of role (0|1)	Main CSDB record ID	Additional CSDB record IDs	CSDB organism IDs	Organism names	Organs and tissues	References (;-separated)
3655	Gtr48		APE73823.1					gtr48			KX756650	12602		-3)aDGalp(1-6)[Ac(1-3)bDFucp3N(1-3),Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-	0	aDGalp(1-6)aDGlcpN	4~6	?DGalp(1-P-P-5)xXnucU	Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol	in silico	Sequencing (gene, protein)	gene cluster name: KL24	CPS	0	0		6740,8598,11922	7328	Acinetobacter baumannii RCH51		Kenyon et al. 2017c (doi: 10.1099/mic.0.000430)	
3705	Gtr14KL5		CAO99489.1 					gtr14			CU468230.2 	13579		-3)[Ac(1-4)[Ac(1-7),Ac(1-5)]aXLegp(2-6)]aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-	0	aDGalp(1-6)aDGlcpN	3~6	?DGalp(1-P-P-5)xXnucU	Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN	in silico	Sequencing (gene, protein)	gene cluster name: KL5; name was augmented to make it unique	CPS	0	0		22785,6713,1366,1180,1102	17290	Acinetobacter baumannii SDF		Arbatsky et al. 2019a (doi: 10.1007/s11172-019-2432-4)	
3709	Gtr14K7		APD17030.1 					gtr14				12021		-3)[Ac(1-5)[Ac(1-7)]aXLegp(2-6)aDGalp(1-6),Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-	0	aDGalp(1-6)aDGlcpN	3~6	?DGalp(1-P-P-5)xXnucU	Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN	in silico	Sequencing (gene, protein)	gene cluster name: KL7, PSgc1; name was augmented to make it unique	CPS	0	0		30673,22786,6705,2272,1367,963	6966	Acinetobacter baumannii LUH5533		Arbatsky et al. 2019a (doi: 10.1007/s11172-019-2432-4)	
3740	Gtr14KL46		QDF13586.1					gtr14			MK609549.1	13716		-3)[75%Ac(1-4)[Ac(1-7),Ac(1-5)]bXPsep(2-6)]aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-	0	aDGalp(1-6)aDGlcpN	3~6	?DGalp(1-P-P-5)xXnucU	Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol	in silico	Sequencing (gene, protein)	gene cluster name: KL46; name was augmented to make it unique	CPS	0	0		22780,21021,1047	17296	Acinetobacter baumannii NIPH 329		Kenyon et al. 2019c (doi: 10.1371/journal.pone.0218461)	
3747	Gtr14K90		AHB32798.1					gtr14			KC526917.1	13914		-3)[Ac(1-5)[Ac(1-7)]bXPsep(2-3)aDGalp(1-6),Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGlcpN(1-	0	aDGalp(1-6)aDGlcpN	3~6	?DGalp(1-P-P-5)xXnucU	Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol	in silico	Sequencing (gene, protein)	gene cluster name: KL90, PSgc26; name was augmented to make it unique	CPS	0	0		2273,6704,22781	17268	Acinetobacter baumannii LUH5553		Senchenkova et al. 2019 (doi: 10.1016/j.carres.2019.04.008)	
3841	Gtr14KL218		ULK74078.1 					gtr14			OK493483.1.	16156		-3)[Ac(1-5)[Ac(1-7)]aXPsep(2-6)]aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-	0	aDGalp(1-6)aDGlcpN	3~6	?DGalp(1-P-P-5)xXnucU	Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol	in silico	Sequencing (gene, protein)	gene cluster name: KL218; name was augmented to make it unique	CPS	0	0		8487,22782	17316	Acinetobacter baumannii 52-249		Kasimova et al. 2022a (doi: 10.1016/j.ijbiomac.2022.07.135)