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Ali AH, Bamigbade G, Tarique M, Esposito G, Obaid R, Abu-Jdayil B, Ayyash M
Physicochemical, rheological, and bioactive properties of exopolysaccharide produced by a potential probiotic Enterococcus faecalis 84B
International Journal of Biological Macromolecules 240 (2023)
124425
Enterococcus faecalis 84B
(Ancestor NCBI TaxID 1351,
species name lookup)
Taxonomic group: bacteria / Firmicutes
(Phylum: Firmicutes)
Associated disease: infection due to Enterococcus faecalis [ICD11:
XN2H4 
]
The structure was elucidated in this paperNCBI PubMed ID: 37076064Publication DOI: 10.1016/j.ijbiomac.2023.124425Journal NLM ID: 7909578Publisher: Butterworth-Heinemann
Correspondence: B. Abu-Jdayil <Babujdayil

uaeu.ac.ae>; M. Ayyash <mutamed.ayyash

uaeu.ac.ae>
Institutions: Department of Food Science, Faculty of Agriculture, Zagazig University, Zagazig 44511, Egypt, Department of Food Science, College of Agriculture and Veterinary Medicine, United Arab Emirates University (UAEU), Al Ain, P.O. Box 15551, United Arab Emirates, Science Division - New York University Abu Dhabi, NYUAD Campus, Saadiyat Island, P.O. Box 129188, Abu Dhabi, United Arab Emirates, Istituto Nazionale Biostrutture e Biosistemi, Viale Medaglie d'Oro 305, 00136 Roma, Italy, Department Clinical Nutrition and Dietetics, University of Sharjah, P. O. Box 27272, Sharjah, United Arab Emirates, Chemical and Petroleum Engineering Department, College of Engineering, United Arab Emirates University (UAEU), Al Ain, P.O. Box 15551, United Arab Emirates
Exopolysaccharides (EPS) have attracted a great interest due to their potential health-promoting properties and industrial applications. This study aimed to investigate the physicochemical, rheological, and biological properties of an EPS produced by a potential probiotic strain Enterococcus faecalis 84B. The results show that the extracted EPS, designated EPS-84B, had an average molecular weight of 604.8 kDa, particles size diameter of 322.0 nm, and mainly composed of arabinose and glucose with a molar ratio of 1:2. Furthermore, EPS-84B exhibited a shear-thinning behavior and had a high melting point. The rheological properties of EPS-84B were strongly influenced by the type of salt than by the pH value. EPS-84B displayed ideal viscoelastic properties, with both viscous and storage moduli increasing with frequency. The antioxidant activity of EPS-84B at a concentration of 5 mg/mL was 81.1 % against DPPH and 35.2 % against ABTS. At 5 mg/mL, the antitumor activity of EPS-84B against Caco-2 and MCF-7 cell lines was 74.6 and 38.6 %, respectively. In addition, the antidiabetic activity of EPS-84B towards α-amylase and α-glucosidase was 89.6 and 90.0 %, respectively at 100 μg/mL. The inhibition of foodborne pathogens by EPS-84B was up to 32.6 %. Overall, EPS-84B has promising properties that could be utilized in food and pharmaceutical industries.
NMR, cytotoxicity, antimicrobial, FTIR, Antidiabetic, SEM
Structure type: polymer chemical repeating unit
Location inside paper: p. 124425-4, table S1
Compound class: EPS
Methods: 13C NMR, 1H NMR, NMR-2D, FTIR, composition analysis, statistical analysis, antioxidant activities, antibacterial assay, cytotoxicity assay, rheological study, SEM, DSC, WHC, UV-vis, antidiabetic activity
Comments, role: NMR temperature was not specified
NCBI Taxonomy refs (TaxIDs): 1351
Show glycosyltransferases
NMR conditions: in D2O
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
2,4,6 aDGlcp 98.91 70.91 81.51 70.67 72.41 61.45
2,4 aDGlcp 100.63 72.60 74.05 70.40 72.12 66.85
2 bDGlcp 104.70 74.22 76.79 77.96 75.68 61.55
aDGlcp 99.16 81.70 72.71 70.45 72.54 61.47
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
2,4,6 aDGlcp 4.97 3.70 3.91 3.72 3.75 3.77-3.85
2,4 aDGlcp 5.36 3.60 3.69 3.52 3.90 3.77-3.99
2 bDGlcp 4.67 3.41 3.80 3.64 3.60 3.79-3.94
aDGlcp 5.54 3.71 3.91 3.50 3.98 3.76-3.86
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
2,4,6 aDGlcp 98.91/4.97 70.91/3.70 81.51/3.91 70.67/3.72 72.41/3.75 61.45/3.77-3.85
2,4 aDGlcp 100.63/5.36 72.60/3.60 74.05/3.69 70.40/3.52 72.12/3.90 66.85/3.77-3.99
2 bDGlcp 104.70/4.67 74.22/3.41 76.79/3.80 77.96/3.64 75.68/3.60 61.55/3.79-3.94
aDGlcp 99.16/5.54 81.70/3.71 72.71/3.91 70.45/3.50 72.54/3.98 61.47/3.76-3.86
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
2,4,6 | aDGlcp | 4.97 | 3.70 | 3.91 | 3.72 | 3.75 | 3.77 3.85 |
2,4 | aDGlcp | 5.36 | 3.60 | 3.69 | 3.52 | 3.90 | 3.77 3.99 |
2 | bDGlcp | 4.67 | 3.41 | 3.80 | 3.64 | 3.60 | 3.79 3.94 |
| aDGlcp | 5.54 | 3.71 | 3.91 | 3.50 | 3.98 | 3.76 3.86 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
2,4,6 | aDGlcp | 98.91 | 70.91 | 81.51 | 70.67 | 72.41 | 61.45 |
2,4 | aDGlcp | 100.63 | 72.60 | 74.05 | 70.40 | 72.12 | 66.85 |
2 | bDGlcp | 104.70 | 74.22 | 76.79 | 77.96 | 75.68 | 61.55 |
| aDGlcp | 99.16 | 81.70 | 72.71 | 70.45 | 72.54 | 61.47 |
|
There is only one chemically distinct structure:
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Shao Z, Tian Y, Liu S, Chu X, Mao W
Anti-Diabetic Activity of a Novel Exopolysaccharide Produced by the Mangrove Endophytic Fungus Penicillium janthinellum N29
Marine Drugs 21(5) (2023)
270
Penicillium janthinellum N29
(Ancestor NCBI TaxID 5079,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
The structure was elucidated in this paperNCBI PubMed ID: 37233464Publication DOI: 10.3390/md21050270Journal NLM ID: 101213729Publisher: Basel, Switzerland: Molecular Diversity Preservation International
Correspondence: W. Mao <wenjunm

ouc.edu.cn>
Institutions: Key Laboratory of Marine Drugs of Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China, Marine Biomedical Research Institute of Qingdao, Qingdao 266237, China, Laboratory for Marine Drugs and Bioproducts, National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China
Marine microorganisms often produce exopolysaccharides with novel structures and diverse biological activities due to their specific marine environment. The novel active exopolysaccharides from marine microorganisms have become an important research area in new drug discovery, and show enormous development prospects. In the present study, a homogeneous exopolysaccharide from the fermented broth of the mangrove endophytic fungus Penicillium janthinellum N29, designated as PJ1-1, was obtained. The results of chemical and spectroscopic analyses showed that PJ1-1 was a novel galactomannan with a molecular weight of about 10.24 kDa. The backbone of PJ1-1 was composed of →2)-α-d-Manp-(1→, →4)-α-d-Manp-(1→, →3)-β-d-Galf-(1→ and →2)-β-d-Galf-(1→ units with partial glycosylation at C-3 of →2)-β-d-Galf-(1→ unit. PJ1-1 had a strong hypoglycemic activity in vitro, evaluated using the assay of α-glucosidase inhibition. The anti-diabetic effect of PJ1-1 in vivo was further investigated using mice with type 2 diabetes mellitus induced by a high-fat diet and streptozotocin. The results indicated that PJ1-1 markedly reduced blood glucose level and improved glucose tolerance. Notably, PJ1-1 increased insulin sensitivity and ameliorated insulin resistance. Moreover, PJ1-1 significantly decreased the levels of serum total cholesterol, triglyceride and low-density lipoprotein cholesterol, enhanced the level of serum high-density lipoprotein cholesterol and alleviated dyslipidemia. These results revealed that PJ1-1 could be a potential source of anti-diabetic agent.
structure, exopolysaccharide, mangrove endophytic fungus, Penicillium, anti-diabetic activity
Structure type: fragment of a bigger structure
Location inside paper: table 2, p. 270-8, Fig. 3, PJ1-1
Compound class: EPS
Methods: 13C NMR, 1H NMR, methylation, GC-MS, sugar analysis, FTIR, HPLC, statistical analysis, fermentation, HPGPC, animal experiments, inhibitory studies, antidiabetic activity
Comments, role: possible structure of the main repeating disaccharide in PJ1-1
Related record ID(s): 41485, 41486
NCBI Taxonomy refs (TaxIDs): 5079
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
?,4,2 SUG
?,4 aDManp 102.19 79.67 71.64 71.39 68.35 62.48
? aDManp 99.76 71.56 71.97 74.78 68.47 64.28
SUG
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
?,4,2 SUG
?,4 aDManp 5.29 4.15 4.01 3.71 3.66 3.76
? aDManp 5.16 4.10 3.87 3.82 3.72 3.65
SUG
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
?,4,2 SUG
?,4 aDManp 102.19/5.29 79.67/4.15 71.64/4.01 71.39/3.71 68.35/3.66 62.48/3.76
? aDManp 99.76/5.16 71.56/4.10 71.97/3.87 74.78/3.82 68.47/3.72 64.28/3.65
SUG
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
?,4,2 | SUG | |
?,4 | aDManp | 5.29 | 4.15 | 4.01 | 3.71 | 3.66 | 3.76 |
? | aDManp | 5.16 | 4.10 | 3.87 | 3.82 | 3.72 | 3.65 |
| SUG | |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
?,4,2 | SUG | |
?,4 | aDManp | 102.19 | 79.67 | 71.64 | 71.39 | 68.35 | 62.48 |
? | aDManp | 99.76 | 71.56 | 71.97 | 74.78 | 68.47 | 64.28 |
| SUG | |
|
There is only one chemically distinct structure:
Expand this record
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Shao Z, Tian Y, Liu S, Chu X, Mao W
Anti-Diabetic Activity of a Novel Exopolysaccharide Produced by the Mangrove Endophytic Fungus Penicillium janthinellum N29
Marine Drugs 21(5) (2023)
270
Penicillium janthinellum N29
(Ancestor NCBI TaxID 5079,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
The structure was elucidated in this paperNCBI PubMed ID: 37233464Publication DOI: 10.3390/md21050270Journal NLM ID: 101213729Publisher: Basel, Switzerland: Molecular Diversity Preservation International
Correspondence: W. Mao <wenjunm

ouc.edu.cn>
Institutions: Key Laboratory of Marine Drugs of Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China, Marine Biomedical Research Institute of Qingdao, Qingdao 266237, China, Laboratory for Marine Drugs and Bioproducts, National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China
Marine microorganisms often produce exopolysaccharides with novel structures and diverse biological activities due to their specific marine environment. The novel active exopolysaccharides from marine microorganisms have become an important research area in new drug discovery, and show enormous development prospects. In the present study, a homogeneous exopolysaccharide from the fermented broth of the mangrove endophytic fungus Penicillium janthinellum N29, designated as PJ1-1, was obtained. The results of chemical and spectroscopic analyses showed that PJ1-1 was a novel galactomannan with a molecular weight of about 10.24 kDa. The backbone of PJ1-1 was composed of →2)-α-d-Manp-(1→, →4)-α-d-Manp-(1→, →3)-β-d-Galf-(1→ and →2)-β-d-Galf-(1→ units with partial glycosylation at C-3 of →2)-β-d-Galf-(1→ unit. PJ1-1 had a strong hypoglycemic activity in vitro, evaluated using the assay of α-glucosidase inhibition. The anti-diabetic effect of PJ1-1 in vivo was further investigated using mice with type 2 diabetes mellitus induced by a high-fat diet and streptozotocin. The results indicated that PJ1-1 markedly reduced blood glucose level and improved glucose tolerance. Notably, PJ1-1 increased insulin sensitivity and ameliorated insulin resistance. Moreover, PJ1-1 significantly decreased the levels of serum total cholesterol, triglyceride and low-density lipoprotein cholesterol, enhanced the level of serum high-density lipoprotein cholesterol and alleviated dyslipidemia. These results revealed that PJ1-1 could be a potential source of anti-diabetic agent.
structure, exopolysaccharide, mangrove endophytic fungus, Penicillium, anti-diabetic activity
Structure type: fragment of a bigger structure
Location inside paper: table 2, p. 270-8, Fig. 3, PJ1-1
Compound class: EPS
Methods: 13C NMR, 1H NMR, methylation, GC-MS, sugar analysis, FTIR, HPLC, statistical analysis, fermentation, HPGPC, animal experiments, inhibitory studies, antidiabetic activity
Comments, role: possible structure of the main repeating disaccharide in PJ1-1
Related record ID(s): 41078, 41486
NCBI Taxonomy refs (TaxIDs): 5079
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
?,2,2 SUG
?,2 aDManp 102.19 79.67 71.64 71.39 68.35 62.48
? aDManp 102.19 79.67 71.64 71.39 68.35 62.48
SUG
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
?,2,2 SUG
?,2 aDManp 5.29 4.15 4.01 3.71 3.66 3.76
? aDManp 5.29 4.15 4.01 3.71 3.66 3.76
SUG
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
?,2,2 SUG
?,2 aDManp 102.19/5.29 79.67/4.15 71.64/4.01 71.39/3.71 68.35/3.66 62.48/3.76
? aDManp 102.19/5.29 79.67/4.15 71.64/4.01 71.39/3.71 68.35/3.66 62.48/3.76
SUG
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
?,2,2 | SUG | |
?,2 | aDManp | 5.29 | 4.15 | 4.01 | 3.71 | 3.66 | 3.76 |
? | aDManp | 5.29 | 4.15 | 4.01 | 3.71 | 3.66 | 3.76 |
| SUG | |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
?,2,2 | SUG | |
?,2 | aDManp | 102.19 | 79.67 | 71.64 | 71.39 | 68.35 | 62.48 |
? | aDManp | 102.19 | 79.67 | 71.64 | 71.39 | 68.35 | 62.48 |
| SUG | |
|
There is only one chemically distinct structure:
Expand this record
Collapse this record
Shao Z, Tian Y, Liu S, Chu X, Mao W
Anti-Diabetic Activity of a Novel Exopolysaccharide Produced by the Mangrove Endophytic Fungus Penicillium janthinellum N29
Marine Drugs 21(5) (2023)
270
Penicillium janthinellum N29
(Ancestor NCBI TaxID 5079,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
The structure was elucidated in this paperNCBI PubMed ID: 37233464Publication DOI: 10.3390/md21050270Journal NLM ID: 101213729Publisher: Basel, Switzerland: Molecular Diversity Preservation International
Correspondence: W. Mao <wenjunm

ouc.edu.cn>
Institutions: Key Laboratory of Marine Drugs of Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China, Marine Biomedical Research Institute of Qingdao, Qingdao 266237, China, Laboratory for Marine Drugs and Bioproducts, National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China
Marine microorganisms often produce exopolysaccharides with novel structures and diverse biological activities due to their specific marine environment. The novel active exopolysaccharides from marine microorganisms have become an important research area in new drug discovery, and show enormous development prospects. In the present study, a homogeneous exopolysaccharide from the fermented broth of the mangrove endophytic fungus Penicillium janthinellum N29, designated as PJ1-1, was obtained. The results of chemical and spectroscopic analyses showed that PJ1-1 was a novel galactomannan with a molecular weight of about 10.24 kDa. The backbone of PJ1-1 was composed of →2)-α-d-Manp-(1→, →4)-α-d-Manp-(1→, →3)-β-d-Galf-(1→ and →2)-β-d-Galf-(1→ units with partial glycosylation at C-3 of →2)-β-d-Galf-(1→ unit. PJ1-1 had a strong hypoglycemic activity in vitro, evaluated using the assay of α-glucosidase inhibition. The anti-diabetic effect of PJ1-1 in vivo was further investigated using mice with type 2 diabetes mellitus induced by a high-fat diet and streptozotocin. The results indicated that PJ1-1 markedly reduced blood glucose level and improved glucose tolerance. Notably, PJ1-1 increased insulin sensitivity and ameliorated insulin resistance. Moreover, PJ1-1 significantly decreased the levels of serum total cholesterol, triglyceride and low-density lipoprotein cholesterol, enhanced the level of serum high-density lipoprotein cholesterol and alleviated dyslipidemia. These results revealed that PJ1-1 could be a potential source of anti-diabetic agent.
structure, exopolysaccharide, mangrove endophytic fungus, Penicillium, anti-diabetic activity
Structure type: fragment of a bigger structure
Location inside paper: table 2, p. 270-8, Fig. 3, PJ1-1
Compound class: EPS
Methods: 13C NMR, 1H NMR, methylation, GC-MS, sugar analysis, FTIR, HPLC, statistical analysis, fermentation, HPGPC, animal experiments, inhibitory studies, antidiabetic activity
Comments, role: possible structure of the main repeating disaccharide in PJ1-1
Related record ID(s): 41078, 41485
NCBI Taxonomy refs (TaxIDs): 5079
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
?,2,2 SUG
?,2,3 SUG
?,2 bDGalf 108.67 89.53 75.87 81.42 61.98 ?
? bDGalf 106.25 89.53 71.64 83.23 61.98 ?
SUG
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
?,2,2 SUG
?,2,3 SUG
?,2 bDGalf 5.25 4.17 4.10 3.87 3.98 ?
? bDGalf 5.23 4.17 4.03 3.87 3.78 ?
SUG
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
?,2,2 SUG
?,2,3 SUG
?,2 bDGalf 108.67/5.25 89.53/4.17 75.87/4.10 81.42/3.87 61.98/3.98 ?/?
? bDGalf 106.25/5.23 89.53/4.17 71.64/4.03 83.23/3.87 61.98/3.78 ?/?
SUG
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
?,2,2 | SUG | |
?,2,3 | SUG | |
?,2 | bDGalf | 5.25 | 4.17 | 4.10 | 3.87 | 3.98 | ? |
? | bDGalf | 5.23 | 4.17 | 4.03 | 3.87 | 3.78 | ? |
| SUG | |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
?,2,2 | SUG | |
?,2,3 | SUG | |
?,2 | bDGalf | 108.67 | 89.53 | 75.87 | 81.42 | 61.98 | ? |
? | bDGalf | 106.25 | 89.53 | 71.64 | 83.23 | 61.98 | ? |
| SUG | |
|
 The spectrum also has 2 signals at unknown positions (not plotted). |
There is only one chemically distinct structure:
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