Taxonomic group: bacteria / Firmicutes
(Phylum: Firmicutes)
Organ / tissue: cell wall
NCBI PubMed ID: 9360295Journal NLM ID: 0376536Publisher: Nauka/Interperiodica
Institutions: School of Biology, Lomonosov Moscow State University, Russia
Information on the prevalence, compositions, and structures of anionic carbohydrate-containing polymers of cell walls of Gram-positive bacteria is summarized. The data suggest that these polymers are important for normal functioning of bacterial cells and require further studies. Structural data on teichoic acids found in the literature published over the last few years are discussed. This is a very diverse class of polymers whose structure-specific pathways of degradation were studied and NMR spectra were examined. Unique comprehensive tables of 13C-NMR spectroscopic data (mainly obtained by the authors) on these polymers are given in the Appendix. Other tables summarize data on teichuronic acids, sugar-phosphate polymers, acid polysaccharides, and structural variants of bonds between acid polysaccharides and peptidoglycans known from the literature. Functions of anionic polymers and their possible chemotaxonomic applications are discussed
13C-NMR, NMR, structure, cell wall, composition, teichoic acid, teichuronic acid, Gram-positive, gram-positive bacteria, taxonomy
Structure type: polymer chemical repeating unit
Location inside paper: p.838, table 4.1 app.
Compound class: teichuronic acid, reduced teichuronic acid
Contained glycoepitopes: IEDB_130648,IEDB_137473,IEDB_1391961,IEDB_141584,IEDB_142488,IEDB_146664,IEDB_885822,IEDB_983931,SB_192
Comments, role: review. Reduced form of the teichuronic acid.
NCBI Taxonomy refs (TaxIDs): 1402Reference(s) to other database(s): GTC:G50246UY, GlycomeDB:
2566
Show glycosyltransferases
NMR conditions: in D2O at 330(C) K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
6,3,4 bDGlcp 105.4 74.8 76.0 79.7 77.5 62.2
6,3 bDGlcp 103.6 73.8 76.0 79.7 77.5 62.2
6,2 Ac 175.8 23.6
6 bDGalpN 102.7 52.4 81.6 68.7 75.3 61.6
2 Ac 175.8 23.3
aDGalpN 99.7 51.1 68.7 69.4 71.2 69.4
1H NMR data:
missing...
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
6,3,4 | bDGlcp | 105.4 | 74.8 | 76.0 | 79.7 | 77.5 | 62.2 |
6,3 | bDGlcp | 103.6 | 73.8 | 76.0 | 79.7 | 77.5 | 62.2 |
6,2 | Ac | 175.8 | 23.6 | |
6 | bDGalpN | 102.7 | 52.4 | 81.6 | 68.7 | 75.3 | 61.6 |
2 | Ac | 175.8 | 23.3 | |
| aDGalpN | 99.7 | 51.1 | 68.7 | 69.4 | 71.2 | 69.4 |
|
There is only one chemically distinct structure:
Taxonomic group: bacteria / Firmicutes
(Phylum: Firmicutes)
The structure was elucidated in this paperNCBI PubMed ID: 6263243Journal NLM ID: 2984726RPublisher: London, UK : Published by Portland Press on behalf of the Biochemical Society
Institutions: Microbiological Chemistry Research Laboratory, University of Newcastle upon Tyne, Newcastle upon Tyne NE1 7RU, UK
The teichuronic acid of Bacillus licheniformis A.T.C.C. 9945 grown under phosphate limitation was isolated from the cell walls and purified by ion-exchange and Sephadex chromatography. The detailed structure of the polysaccharide was established by methylation analysis, periodate oxidation and partial acid hydrolysis. The polymer is composed of tetrasaccharide repeating units with the structure [GlcA β(1→4)GlcA β(1→3)GalNAc β(1→6)GalNAc α(1→4)n. 13C n.m.r. analysis has confirmed most of the structural features of the polysaccharide and, in particular, the anomeric configurations and linkage positions of substituents. The teichuronic acid from glucose-limited cells was identical with that from cells grown under phosphate limitation.
Structure type: polymer chemical repeating unit
Location inside paper: abstract, p. 317
Compound class: teichuronic acid, reduced teichuronic acid
Contained glycoepitopes: IEDB_130648,IEDB_137473,IEDB_1391961,IEDB_141584,IEDB_142488,IEDB_146664,IEDB_885822,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, methylation, partial acid hydrolysis, paper chromatography, periodate oxidation, NaBH4 reduction
Comments, role: product of reduction; phosphate-limited growth conditions
Related record ID(s): 105932
NCBI Taxonomy refs (TaxIDs): 1402Reference(s) to other database(s): GTC:G50246UY, GlycomeDB:
2566
Show glycosyltransferases
NMR conditions: in D2O at 305(C) K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
6,3,4 bDGlcp 103.6 73.8 76.0 79.7 77.5 62.2
6,3 bDGlcp 105.4 74.8 76.0 79.7 77.5 62.2
6,2 Ac 175.8 23.6
6 bDGalpN 102.7 52.4 81.6 68.7 75.3 61.6
2 Ac 175.8 23.3
aDGalpN 99.7 51.1 68.7 69.4 71.2 69.4
1H NMR data:
missing...
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
6,3,4 | bDGlcp | 103.6 | 73.8 | 76.0 | 79.7 | 77.5 | 62.2 |
6,3 | bDGlcp | 105.4 | 74.8 | 76.0 | 79.7 | 77.5 | 62.2 |
6,2 | Ac | 175.8 | 23.6 | |
6 | bDGalpN | 102.7 | 52.4 | 81.6 | 68.7 | 75.3 | 61.6 |
2 | Ac | 175.8 | 23.3 | |
| aDGalpN | 99.7 | 51.1 | 68.7 | 69.4 | 71.2 | 69.4 |
|
There is only one chemically distinct structure: