Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Organ / tissue: mycelium
The structure was elucidated in this paperNCBI PubMed ID: 25618023Publication DOI: 10.1007/s10719-014-9568-0Journal NLM ID: 8603310Publisher: Kluwer Academic Publishers
Correspondence: Chen Y <mojojo1984

163.co>
Institutions: Key Laboratory of Marine Drugs, Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao, China, College of Food and Pharmacy, Zhejiang Ocean University, Zhoushan, China
The exopolysaccharide-producing fungus Penicillium purpurogenum JS03-21 from the acidic purple clay was screened to develop greater insights into microbial exopolysaccharide resources from extremophilic microorganisms. An exopolysaccharide JS1-1 was purified from the fermented broth of the aciduric fungus using a combination of ethanol precipitation, anion-exchange and size-exclusion chromatography. JS1-1 was found to be a neutral heteropolysaccharide composed of galactose, mannose and glucose in the ratio of 7.9:2.1:1.0, with a molecular weight of about 26 kDa. JS1-1 was subjected to a series of methylation and partial acid hydrolysis reactions, as well as being analyzed by one- and two-dimensional nuclear magnetic resonance, and the results of these analyses revealed JS1-1 to be a galactofuranose-rich polysaccharide. The main chain of JS1-1 contained two regions, including a galactose part composed of a repeating trisaccharide unit [i.e., →5)-β-D-Galf(1 → 5)-β-D-Galf(1 → 6)-β-D-Galf(1→], and a mannose section consisting of (1 → 6)-linked α-D-Manp residues. Two further segments [i.e., α-D-Glcp(1 → 2)-α-D-Galf (1 → and α-D-Galf(1 → 2)-α-D-Manp(1→] existed as branches that were linked to the O-2 atoms of the (1 → 6)-β-D-Galf and (1 → 6)-α-D-Manp regions of the main chain, respectively. The results of the current study demonstrate that JS1-1 is a unique polysaccharide that is rich in both α and β galactofuranose units and therefore different from most of the other known extracellular polysaccharides. The function of this polysaccharide is currently being researched in our laboratory.
NMR, extraction, heteropolysaccharide, Penicillium purpurogenum
Structure type: fragment of a bigger structure ; n=14
Location inside paper: Fig. 3(left fragment), table 2, Fig. 2, JS1-1
Compound class: EPS
Contained glycoepitopes: IEDB_136095,IEDB_137472,IEDB_142488,IEDB_144998,IEDB_146664,IEDB_149176,IEDB_190606,IEDB_885812,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, IR, acid hydrolysis, HPLC, HPSEC, UV, methylation analysis, column chromatography, dialysis, precipitation, phenol-sulfuric acid assay, HMBC, HMQC, centrifugation, COSY, NOESY, filtration, Lowry method, phenol-sulfuric acid method, phosphate measurements, sulfate ester measurements
Comments, role: two parts are linked together through (1-2,6) aDManp residue; molecular mass of compound is 20.6 kDa
Related record ID(s): 42341
NCBI Taxonomy refs (TaxIDs): 1266744Reference(s) to other database(s): GTC:G24767GP
Show glycosyltransferases
NMR conditions: in D2O
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
6,5 bDGalf 109.3 82.5 77.4 82.5 76.6 63.4
6 bDGalf 109.3 82.5 77.4 82.5 76.6 63.4
2,2 aDGlcp 98.76 72.14 74.11 74.11 70.40 61.88
2 aDGalf 100.23 82.1 73.1 72.0 ? ?
bDGalf 106.92 88.39 76.38 83.21 72.11 70.29
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
6,5 bDGalf 5.08 4.18 4.12 4.17 3.88 3.71-3.84
6 bDGalf 5.08 4.18 4.12 4.17 3.88 3.71-3.84
2,2 aDGlcp 5.05 3.61 3.82 3.49 3.86 3.67-3.78
2 aDGalf 5.41 4.29 4.40 3.89 3.80 ?
bDGalf 5.37 4.30 4.28 4.12 3.78 3.67-3.83
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
6,5 bDGalf 109.3/5.08 82.5/4.18 77.4/4.12 82.5/4.17 76.6/3.88 63.4/3.71-3.84
6 bDGalf 109.3/5.08 82.5/4.18 77.4/4.12 82.5/4.17 76.6/3.88 63.4/3.71-3.84
2,2 aDGlcp 98.76/5.05 72.14/3.61 74.11/3.82 74.11/3.49 70.40/3.86 61.88/3.67-3.78
2 aDGalf 100.23/5.41 82.1/4.29 73.1/4.40 72.0/3.89 ?/3.80 ?/?
bDGalf 106.92/5.37 88.39/4.30 76.38/4.28 83.21/4.12 72.11/3.78 70.29/3.67-3.83
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
6,5 | bDGalf | 5.08 | 4.18 | 4.12 | 4.17 | 3.88 | 3.71 3.84 |
6 | bDGalf | 5.08 | 4.18 | 4.12 | 4.17 | 3.88 | 3.71 3.84 |
2,2 | aDGlcp | 5.05 | 3.61 | 3.82 | 3.49 | 3.86 | 3.67 3.78 |
2 | aDGalf | 5.41 | 4.29 | 4.40 | 3.89 | 3.80 | ? |
| bDGalf | 5.37 | 4.30 | 4.28 | 4.12 | 3.78 | 3.67 3.83 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
6,5 | bDGalf | 109.3 | 82.5 | 77.4 | 82.5 | 76.6 | 63.4 |
6 | bDGalf | 109.3 | 82.5 | 77.4 | 82.5 | 76.6 | 63.4 |
2,2 | aDGlcp | 98.76 | 72.14 | 74.11 | 74.11 | 70.40 | 61.88 |
2 | aDGalf | 100.23 | 82.1 | 73.1 | 72.0 | ? | ? |
| bDGalf | 106.92 | 88.39 | 76.38 | 83.21 | 72.11 | 70.29 |
|
 The spectrum also has 2 signals at unknown positions (not plotted). |
There is only one chemically distinct structure:
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Organ / tissue: mycelium
The structure was elucidated in this paperNCBI PubMed ID: 25618023Publication DOI: 10.1007/s10719-014-9568-0Journal NLM ID: 8603310Publisher: Kluwer Academic Publishers
Correspondence: Chen Y <mojojo1984

163.co>
Institutions: Key Laboratory of Marine Drugs, Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao, China, College of Food and Pharmacy, Zhejiang Ocean University, Zhoushan, China
The exopolysaccharide-producing fungus Penicillium purpurogenum JS03-21 from the acidic purple clay was screened to develop greater insights into microbial exopolysaccharide resources from extremophilic microorganisms. An exopolysaccharide JS1-1 was purified from the fermented broth of the aciduric fungus using a combination of ethanol precipitation, anion-exchange and size-exclusion chromatography. JS1-1 was found to be a neutral heteropolysaccharide composed of galactose, mannose and glucose in the ratio of 7.9:2.1:1.0, with a molecular weight of about 26 kDa. JS1-1 was subjected to a series of methylation and partial acid hydrolysis reactions, as well as being analyzed by one- and two-dimensional nuclear magnetic resonance, and the results of these analyses revealed JS1-1 to be a galactofuranose-rich polysaccharide. The main chain of JS1-1 contained two regions, including a galactose part composed of a repeating trisaccharide unit [i.e., →5)-β-D-Galf(1 → 5)-β-D-Galf(1 → 6)-β-D-Galf(1→], and a mannose section consisting of (1 → 6)-linked α-D-Manp residues. Two further segments [i.e., α-D-Glcp(1 → 2)-α-D-Galf (1 → and α-D-Galf(1 → 2)-α-D-Manp(1→] existed as branches that were linked to the O-2 atoms of the (1 → 6)-β-D-Galf and (1 → 6)-α-D-Manp regions of the main chain, respectively. The results of the current study demonstrate that JS1-1 is a unique polysaccharide that is rich in both α and β galactofuranose units and therefore different from most of the other known extracellular polysaccharides. The function of this polysaccharide is currently being researched in our laboratory.
NMR, extraction, heteropolysaccharide, Penicillium purpurogenum
Structure type: fragment of a bigger structure ; n=14
Location inside paper: Fig. 3(right fragment), table 2, Fig. 2, JS1-1
Compound class: EPS
Contained glycoepitopes: IEDB_130701,IEDB_136104,IEDB_137472,IEDB_140116,IEDB_141793,IEDB_141828,IEDB_141829,IEDB_141831,IEDB_143632,IEDB_144983,IEDB_152206,IEDB_153220,IEDB_153762,IEDB_153763,IEDB_190606,IEDB_76933,IEDB_857732,IEDB_857735,IEDB_983930,SB_136,SB_191,SB_196,SB_198,SB_44,SB_67,SB_72
Methods: 13C NMR, 1H NMR, IR, acid hydrolysis, HPLC, HPSEC, UV, methylation analysis, column chromatography, dialysis, precipitation, phenol-sulfuric acid assay, HMBC, HMQC, centrifugation, COSY, NOESY, filtration, Lowry method, phenol-sulfuric acid method, phosphate measurements, sulfate ester measurements
Comments, role: two parts are linked together through (1-2,6)aDManp residue; molecular mass of compound is 20.6 kDa
Related record ID(s): 42340
NCBI Taxonomy refs (TaxIDs): 1266744Reference(s) to other database(s): GTC:G03657MI
Show glycosyltransferases
NMR conditions: in D2O
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
2,2 aDGalf 104.2 78.21 74.4 82.3 ? ?
2 aDManp 101.6 78.0 70.6 68.2 72.22 62.4
aDManp 99.7 78.7 70.25 68.2 ? 67.27
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
2,2 aDGalf 5.24 4.22 4.25 ? ? ?
2 aDManp 5.26 4.12 4.03 3.70 3.86 3.77-3.93
aDManp 5.20 4.22 3.99 3.70 3.83 3.71-3.79
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
2,2 aDGalf 104.2/5.24 78.21/4.22 74.4/4.25 82.3/? ?/? ?/?
2 aDManp 101.6/5.26 78.0/4.12 70.6/4.03 68.2/3.70 72.22/3.86 62.4/3.77-3.93
aDManp 99.7/5.20 78.7/4.22 70.25/3.99 68.2/3.70 ?/3.83 67.27/3.71-3.79
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
2,2 | aDGalf | 5.24 | 4.22 | 4.25 | ? | ? | ? |
2 | aDManp | 5.26 | 4.12 | 4.03 | 3.70 | 3.86 | 3.77 3.93 |
| aDManp | 5.20 | 4.22 | 3.99 | 3.70 | 3.83 | 3.71 3.79 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
2,2 | aDGalf | 104.2 | 78.21 | 74.4 | 82.3 | ? | ? |
2 | aDManp | 101.6 | 78.0 | 70.6 | 68.2 | 72.22 | 62.4 |
| aDManp | 99.7 | 78.7 | 70.25 | 68.2 | ? | 67.27 |
|
 The spectrum also has 3 signals at unknown positions (not plotted). |
There is only one chemically distinct structure: