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Huang TT, Wages JM
New-to-nature sophorose analog: a potent inducer for gene expression in Trichoderma reesei
Enzyme and Microbial Technology 85 (2016)
44-50
Starmerella bombicola ATCC 22214
(previously named: Candida bombicola ATCC 22214)
(Ancestor NCBI TaxID 75736,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
NCBI PubMed ID: 26920480Publication DOI: 10.1016/j.enzmictec.2016.01.003Journal NLM ID: 8003761Correspondence: Huang TT <huan45

gmail.com>
Institutions: Panorama Research, Inc., Sunnyvale, CA, USA, Sophoro Biotechnologies, Sunnyvale, CA, USA
Controlled hydrolysis of lactonic sophorolipids from Starmerella bombicola yields a previously undescribed sophorose analog that potently induces cellulase in Trichoderma reesei Rut-C30. Acid treatment of natural sophorolipids results in a mixture of monoacetylated, deacetylated, and diacetylated sophorolipids in acidic and lactonic forms. Isolation of the active components of the mixture, followed by structure determination by MS and NMR, reveals a new chemical entity, in which the lactone ring has been opened at the C-1' rather than at the C-4″ position of the sophorose moiety. This sophorose ester is resistant to degradation by the host and is at least 28 times more powerful an inducer than sophorose in shake-flask culture. Even at low concentrations (0.05 mM), the chemically modified sophorolipid effectively induces cellulase. With further improvements, this highly enabling technology can potentially reduce the cost of enzymes produced in T. reesei and can facilitate the rapid deployment of enzyme plants to support the nascent cellulosic biofuels and biochemicals industries.
gene expression, fermentation, cellulase, Trichoderma, sophorolipid, inducer
Structure type: cyclic polymer repeating unit ; 711 [M+Na]+
Location inside paper: fig. 1A, fig. 2A
Compound class: glycolipid
Contained glycoepitopes: IEDB_140628,IEDB_142488,IEDB_146664,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, TLC, HSQC, HCl hydrolysis, HPLC/MS
Comments, role: diacetylated lactonic component of crude mixture of harvested sophorolipids produced by S. bombicola ATCC 22214
Related record ID(s): 42712, 42713, 42714
NCBI Taxonomy refs (TaxIDs): 75736
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There is only one chemically distinct structure:
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Huang TT, Wages JM
New-to-nature sophorose analog: a potent inducer for gene expression in Trichoderma reesei
Enzyme and Microbial Technology 85 (2016)
44-50
Starmerella bombicola ATCC 22214
(previously named: Candida bombicola ATCC 22214)
(Ancestor NCBI TaxID 75736,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
NCBI PubMed ID: 26920480Publication DOI: 10.1016/j.enzmictec.2016.01.003Journal NLM ID: 8003761Correspondence: Huang TT <huan45

gmail.com>
Institutions: Panorama Research, Inc., Sunnyvale, CA, USA, Sophoro Biotechnologies, Sunnyvale, CA, USA
Controlled hydrolysis of lactonic sophorolipids from Starmerella bombicola yields a previously undescribed sophorose analog that potently induces cellulase in Trichoderma reesei Rut-C30. Acid treatment of natural sophorolipids results in a mixture of monoacetylated, deacetylated, and diacetylated sophorolipids in acidic and lactonic forms. Isolation of the active components of the mixture, followed by structure determination by MS and NMR, reveals a new chemical entity, in which the lactone ring has been opened at the C-1' rather than at the C-4″ position of the sophorose moiety. This sophorose ester is resistant to degradation by the host and is at least 28 times more powerful an inducer than sophorose in shake-flask culture. Even at low concentrations (0.05 mM), the chemically modified sophorolipid effectively induces cellulase. With further improvements, this highly enabling technology can potentially reduce the cost of enzymes produced in T. reesei and can facilitate the rapid deployment of enzyme plants to support the nascent cellulosic biofuels and biochemicals industries.
gene expression, fermentation, cellulase, Trichoderma, sophorolipid, inducer
Structure type: oligomer
C
34H
58O
14Location inside paper: fig. 1B, fig. 2A
Trivial name: sophorolipid
Compound class: glycolipid, sophorolipid, glyccolipid
Contained glycoepitopes: IEDB_140628,IEDB_142488,IEDB_146664,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, TLC, HSQC, HCl hydrolysis, HPLC/MS
Comments, role: monoacetylated acidic component of crude mixture of harvested sophorolipids produced by S. bombicola ATCC 22214
Related record ID(s): 42711, 42713, 42714
NCBI Taxonomy refs (TaxIDs): 75736
Show glycosyltransferases
There is only one chemically distinct structure:
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Huang TT, Wages JM
New-to-nature sophorose analog: a potent inducer for gene expression in Trichoderma reesei
Enzyme and Microbial Technology 85 (2016)
44-50
Starmerella bombicola ATCC 22214
(previously named: Candida bombicola ATCC 22214)
(Ancestor NCBI TaxID 75736,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
The structure was elucidated in this paperNCBI PubMed ID: 26920480Publication DOI: 10.1016/j.enzmictec.2016.01.003Journal NLM ID: 8003761Correspondence: Huang TT <huan45

gmail.com>
Institutions: Panorama Research, Inc., Sunnyvale, CA, USA, Sophoro Biotechnologies, Sunnyvale, CA, USA
Controlled hydrolysis of lactonic sophorolipids from Starmerella bombicola yields a previously undescribed sophorose analog that potently induces cellulase in Trichoderma reesei Rut-C30. Acid treatment of natural sophorolipids results in a mixture of monoacetylated, deacetylated, and diacetylated sophorolipids in acidic and lactonic forms. Isolation of the active components of the mixture, followed by structure determination by MS and NMR, reveals a new chemical entity, in which the lactone ring has been opened at the C-1' rather than at the C-4″ position of the sophorose moiety. This sophorose ester is resistant to degradation by the host and is at least 28 times more powerful an inducer than sophorose in shake-flask culture. Even at low concentrations (0.05 mM), the chemically modified sophorolipid effectively induces cellulase. With further improvements, this highly enabling technology can potentially reduce the cost of enzymes produced in T. reesei and can facilitate the rapid deployment of enzyme plants to support the nascent cellulosic biofuels and biochemicals industries.
gene expression, fermentation, cellulase, Trichoderma, sophorolipid, inducer
Structure type: oligomer ; 665 [M+H]+
Location inside paper: fig. 1C, Table 2, fig. 3
Compound class: glycolipid
Contained glycoepitopes: IEDB_140628,IEDB_142488,IEDB_146664,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, TLC, HSQC, HCl hydrolysis, HPLC/MS
Biological activity: significantly induces cellulase in Trichoderma reesei Rut-C30 (see Table 2)
Synthetic data: chemical
Comments, role: obtained by acid hydrolysis of crude mixture of harvested sophorolipids produced by S. bombicola ATCC 22214 (major component); NMR solvent and temperature were not specificied
Related record ID(s): 42711, 42712, 42714
NCBI Taxonomy refs (TaxIDs): 75736
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[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6 C7 C8 C9 C10 C11 C12 C13 C14 C15 C16 C17 C18
2,4 l?17HOOle 172.3 33.7 24.6 25.6-29.6 25.6-29.6 25.6-29.6 25.6-29.6 26.9 129.6 129.6 26.9 25.6-29 25.6-29 25.6-29 25.6-29 39.0 71.5 22.2
2 bDGlcp 104.7 74.1 72.3 70.6 67.3 62.6
6 Ac 171.2 19.5
bDGlcp 92.4 82.1 74.1 70.2 71.9 61.4
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6 H7 H8 H9 H10 H11 H12 H13 H14 H15 H16 H17 H18
2,4 l?17HOOle - 2.36 1.62 1.27-1.46 1.27-1.46 1.27-1.46 1.27-1.46 2.00-2.05 5.34 5.34 2.00-2.05 1.27-1.46 1.27-1.46 1.27-1.46 1.27-1.46 1.40 3.78 1.14
2 bDGlcp 4.53 3.40 3.85 4.82 3.68 4.08-4.14
6 Ac - 2.04
bDGlcp 5.31 3.42 3.56 3.36 3.66 3.68-3.78
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6 C7/H7 C8/H8 C9/H9 C10/H10 C11/H11 C12/H12 C13/H13 C14/H14 C15/H15 C16/H16 C17/H17 C18/H18
2,4 l?17HOOle 33.7/2.36 24.6/1.62 25.6-29.6/1.27-1.46 25.6-29.6/1.27-1.46 25.6-29.6/1.27-1.46 25.6-29.6/1.27-1.46 26.9/2.00-2.05 129.6/5.34 129.6/5.34 26.9/2.00-2.05 25.6-29/1.27-1.46 25.6-29/1.27-1.46 25.6-29/1.27-1.46 25.6-29/1.27-1.46 39.0/1.40 71.5/3.78 22.2/1.14
2 bDGlcp 104.7/4.53 74.1/3.40 72.3/3.85 70.6/4.82 67.3/3.68 62.6/4.08-4.14
6 Ac 19.5/2.04
bDGlcp 92.4/5.31 82.1/3.42 74.1/3.56 70.2/3.36 71.9/3.66 61.4/3.68-3.78
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 | H7 | H8 | H9 | H10 | H11 | H12 | H13 | H14 | H15 | H16 | H17 | H18 |
2,4 | l?17HOOle |
| 2.36 | 1.62 | 1.27 1.46 | 1.27 1.46 | 1.27 1.46 | 1.27 1.46 | 2.00 2.05 | 5.34 | 5.34 | 2.00 2.05 | 1.27 1.46 | 1.27 1.46 | 1.27 1.46 | 1.27 1.46 | 1.40 | 3.78 | 1.14 |
2 | bDGlcp | 4.53 | 3.40 | 3.85 | 4.82 | 3.68 | 4.08 4.14 | |
6 | Ac |
| 2.04 | |
| bDGlcp | 5.31 | 3.42 | 3.56 | 3.36 | 3.66 | 3.68 3.78 | |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 | C10 | C11 | C12 | C13 | C14 | C15 | C16 | C17 | C18 |
2,4 | l?17HOOle | 172.3 | 33.7 | 24.6 | 25.6 29.6 | 25.6 29.6 | 25.6 29.6 | 25.6 29.6 | 26.9 | 129.6 | 129.6 | 26.9 | 25.6 29 | 25.6 29 | 25.6 29 | 25.6 29 | 39.0 | 71.5 | 22.2 |
2 | bDGlcp | 104.7 | 74.1 | 72.3 | 70.6 | 67.3 | 62.6 | |
6 | Ac | 171.2 | 19.5 | |
| bDGlcp | 92.4 | 82.1 | 74.1 | 70.2 | 71.9 | 61.4 | |
|
There is only one chemically distinct structure:
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Huang TT, Wages JM
New-to-nature sophorose analog: a potent inducer for gene expression in Trichoderma reesei
Enzyme and Microbial Technology 85 (2016)
44-50
Starmerella bombicola ATCC 22214
(previously named: Candida bombicola ATCC 22214)
(Ancestor NCBI TaxID 75736,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
The structure was elucidated in this paperNCBI PubMed ID: 26920480Publication DOI: 10.1016/j.enzmictec.2016.01.003Journal NLM ID: 8003761Correspondence: Huang TT <huan45

gmail.com>
Institutions: Panorama Research, Inc., Sunnyvale, CA, USA, Sophoro Biotechnologies, Sunnyvale, CA, USA
Controlled hydrolysis of lactonic sophorolipids from Starmerella bombicola yields a previously undescribed sophorose analog that potently induces cellulase in Trichoderma reesei Rut-C30. Acid treatment of natural sophorolipids results in a mixture of monoacetylated, deacetylated, and diacetylated sophorolipids in acidic and lactonic forms. Isolation of the active components of the mixture, followed by structure determination by MS and NMR, reveals a new chemical entity, in which the lactone ring has been opened at the C-1' rather than at the C-4″ position of the sophorose moiety. This sophorose ester is resistant to degradation by the host and is at least 28 times more powerful an inducer than sophorose in shake-flask culture. Even at low concentrations (0.05 mM), the chemically modified sophorolipid effectively induces cellulase. With further improvements, this highly enabling technology can potentially reduce the cost of enzymes produced in T. reesei and can facilitate the rapid deployment of enzyme plants to support the nascent cellulosic biofuels and biochemicals industries.
gene expression, fermentation, cellulase, Trichoderma, sophorolipid, inducer
Structure type: oligomer
Location inside paper: fig. 1D, fig. 4
Compound class: glycolipid
Contained glycoepitopes: IEDB_140628,IEDB_142488,IEDB_146664,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, TLC, HSQC, HCl hydrolysis, HPLC/MS
Biological activity: significantly induces cellulase in Trichoderma reesei Rut-C30 (see Table 2)
Synthetic data: chemical
Comments, role: obtained by acid hydrolysis of crude mixture of harvested sophorolipids produced by S. bombicola ATCC 22214 (minor component)
Related record ID(s): 42711, 42712, 42713
NCBI Taxonomy refs (TaxIDs): 75736
Show glycosyltransferases
There is only one chemically distinct structure:
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