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Hu ZX, Xue YB, Bi XB, Zhang JW, Luo ZW, Li XN, Yao GM, Wang JP, Zhang YH
Five new secondary metabolites produced by a marine-associated fungus, Daldinia eschscholzii
Marine Drugs 12(11) (2014)
5563-5575
a-D-Ribf-(1-5)-Subst
Subst = chromane moiety = SMILES O{5}C1=C([C@H](O)C[C@@H](C)O2)C2=CC=C1 |
Show graphically |
Daldinia eschscholtzii
(previously named: Sphaeria eschscholtzii; later renamed to: Daldinia eschscholzii)
(NCBI TaxID 292717,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Host organism: Scaevola sericea
Organ / tissue: branch
The structure was elucidated in this paperNCBI PubMed ID: 25419997Publication DOI: 10.3390/md12115563Journal NLM ID: 101213729Publisher: Basel, Switzerland: Molecular Diversity Preservation International
Correspondence: Wang JP <jpwang1001

163.com>; Zhang YH <zhangyh

mails.tjmu.edu.cn>; Hu ZX <hzx616

126.com>; Xue YB <yongboxue

mail.hust.edu.cn>; Bi XB <bxbin8353

163.com>; Luo ZW <luozengwei

gmail.com>; Yao GM <gyap

mail.hust.edu.cn>; Zhang JW <tjzhangjinwen

163.com>; Li XN <lixiaonian

mail.kib.ac.cn>
Institutions: State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China, Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China, Tongji Hospital Affiliated to Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
Five new compounds, including a benzopyran ribonic glycoside, daldiniside A (1), two isocoumarin ribonic glycosides, daldinisides B (2) and C (3), and two alkaloids, 1-(3-indolyl)-2R,3-dihydroxypropan-1-one (4) and 3-ethyl-2, 5-pyrazinedipropanoic acid (5), along with five known compounds (6-10), were isolated from the EtOAc extract of the marine-associated fungus, Daldinia eschscholzii. Their structures were elucidated by extensive physicochemical and spectroscopic properties, besides comparison with literature data. The absolute configurations of compounds 1-3 were corroborated by chemical transformation, GC analysis and X-ray crystallographic analysis. Meanwhile, the absolute configuration of compound 4 and the planar structure of compound 6 were also determined based on the X-ray diffraction analysis. The cytotoxicity of compounds 1-10, antifungal and anti-HIV activities of compounds 1-5 and the in vitro assay for glucose consumption of compounds 1-3 were done in the anti-diabetic model, whereas none showed obvious activity.
hydrolysis, secondary metabolites, marine-associated fungus, Daldinia eschscholzii, GC analysis, X-ray diffraction analysis
Structure type: monomer ; 335.1097 [M+Na]+
C
15H
20O
7Location inside paper: compound 1, fig. 1(1), table 1(1)
Trivial name: daldiniside A
Compound class: phenolic glycoside
Contained glycoepitopes: IEDB_149136
Methods: 13C NMR, 1H NMR, X-ray, HPLC, UV, cytotoxicity assay, HMBC, COSY, NOESY, antifungal activity assay, FT-IR, HRESIMS, TFA hydrolysis, GС
Comments, role: NMR temperature was not specified
Related record ID(s): 47452, 47453
NCBI Taxonomy refs (TaxIDs): 292717
Show glycosyltransferases
NMR conditions: in CD3OD
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6 C7 C8 C9 C10
5 aDRibf 103.4 73.9 71.4 88.5 63.5
Subst 68.8 38.9 60.1 116.1 158.6 107.9 130.5 112.0 157.4 21.6
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6 H7 H8 H9 H10
5 aDRibf 5.70 4.23 4.10 4.20 3.64-3.69
Subst 4.21 1.68-2.01 5.04 - - 6.72 7.12 6.49 - 1.40
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6 C7/H7 C8/H8 C9/H9 C10/H10
5 aDRibf 103.4/5.70 73.9/4.23 71.4/4.10 88.5/4.20 63.5/3.64-3.69
Subst 68.8/4.21 38.9/1.68-2.01 60.1/5.04 107.9/6.72 130.5/7.12 112.0/6.49 21.6/1.40
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 | H7 | H8 | H9 | H10 |
5 | aDRibf | 5.70 | 4.23 | 4.10 | 4.20 | 3.64 3.69 | |
| Subst | 4.21 | 1.68 2.01 | 5.04 |
|
| 6.72 | 7.12 | 6.49 |
| 1.40 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 | C10 |
5 | aDRibf | 103.4 | 73.9 | 71.4 | 88.5 | 63.5 | |
| Subst | 68.8 | 38.9 | 60.1 | 116.1 | 158.6 | 107.9 | 130.5 | 112.0 | 157.4 | 21.6 |
|
There is only one chemically distinct structure:
Expand this record
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Hu ZX, Xue YB, Bi XB, Zhang JW, Luo ZW, Li XN, Yao GM, Wang JP, Zhang YH
Five new secondary metabolites produced by a marine-associated fungus, Daldinia eschscholzii
Marine Drugs 12(11) (2014)
5563-5575
a-D-Ribf-(1-6)-Subst
Subst = isocoumarin moiety = SMILES OC1=C2C(C=C(C)OC2=O)=C{6}C(O)=C1 |
Show graphically |
Daldinia eschscholtzii
(previously named: Sphaeria eschscholtzii; later renamed to: Daldinia eschscholzii)
(NCBI TaxID 292717,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Host organism: Scaevola sericea
Organ / tissue: branch
The structure was elucidated in this paperNCBI PubMed ID: 25419997Publication DOI: 10.3390/md12115563Journal NLM ID: 101213729Publisher: Basel, Switzerland: Molecular Diversity Preservation International
Correspondence: Wang JP <jpwang1001

163.com>; Zhang YH <zhangyh

mails.tjmu.edu.cn>; Hu ZX <hzx616

126.com>; Xue YB <yongboxue

mail.hust.edu.cn>; Bi XB <bxbin8353

163.com>; Luo ZW <luozengwei

gmail.com>; Yao GM <gyap

mail.hust.edu.cn>; Zhang JW <tjzhangjinwen

163.com>; Li XN <lixiaonian

mail.kib.ac.cn>
Institutions: State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China, Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China, Tongji Hospital Affiliated to Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
Five new compounds, including a benzopyran ribonic glycoside, daldiniside A (1), two isocoumarin ribonic glycosides, daldinisides B (2) and C (3), and two alkaloids, 1-(3-indolyl)-2R,3-dihydroxypropan-1-one (4) and 3-ethyl-2, 5-pyrazinedipropanoic acid (5), along with five known compounds (6-10), were isolated from the EtOAc extract of the marine-associated fungus, Daldinia eschscholzii. Their structures were elucidated by extensive physicochemical and spectroscopic properties, besides comparison with literature data. The absolute configurations of compounds 1-3 were corroborated by chemical transformation, GC analysis and X-ray crystallographic analysis. Meanwhile, the absolute configuration of compound 4 and the planar structure of compound 6 were also determined based on the X-ray diffraction analysis. The cytotoxicity of compounds 1-10, antifungal and anti-HIV activities of compounds 1-5 and the in vitro assay for glucose consumption of compounds 1-3 were done in the anti-diabetic model, whereas none showed obvious activity.
hydrolysis, secondary metabolites, marine-associated fungus, Daldinia eschscholzii, GC analysis, X-ray diffraction analysis
Structure type: monomer ; 347.0731 [M+Na]+
C
15H
16O
8Location inside paper: compound 2, fig. 1(2), table 1(2)
Trivial name: daldiniside B
Compound class: phenolic glycoside
Contained glycoepitopes: IEDB_149136
Methods: 13C NMR, 1H NMR, X-ray, HPLC, UV, cytotoxicity assay, HMBC, COSY, NOESY, antifungal activity assay, FT-IR, HRESIMS, TFA hydrolysis, GС
Comments, role: NMR temperature was not specified
Related record ID(s): 47451, 47453
NCBI Taxonomy refs (TaxIDs): 292717
Show glycosyltransferases
NMR conditions: in CD3OD
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6 C7 C8 C9 C10 C11
6 aDRibf 101.8 73.6 71.2 88.3 63.3
Subst 167.8 - 155.9 105.8 141.2 104.5 166.1 103.9 164.5 101.4 19.4
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6 H7 H8 H9 H10 H11
6 aDRibf 5.74 4.24 4.12 4.15 3.65-3.72
Subst - - - 6.31 - 6.58 - 6.62 - - 2.22
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6 C7/H7 C8/H8 C9/H9 C10/H10 C11/H11
6 aDRibf 101.8/5.74 73.6/4.24 71.2/4.12 88.3/4.15 63.3/3.65-3.72
Subst 105.8/6.31 104.5/6.58 103.9/6.62 19.4/2.22
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 | H7 | H8 | H9 | H10 | H11 |
6 | aDRibf | 5.74 | 4.24 | 4.12 | 4.15 | 3.65 3.72 | |
| Subst |
|
|
| 6.31 |
| 6.58 |
| 6.62 |
|
| 2.22 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 | C10 | C11 |
6 | aDRibf | 101.8 | 73.6 | 71.2 | 88.3 | 63.3 | |
| Subst | 167.8 |
| 155.9 | 105.8 | 141.2 | 104.5 | 166.1 | 103.9 | 164.5 | 101.4 | 19.4 |
|
 The spectrum also has 1 signal at unknown position (not plotted). |
There is only one chemically distinct structure:
Expand this record
Collapse this record
Hu ZX, Xue YB, Bi XB, Zhang JW, Luo ZW, Li XN, Yao GM, Wang JP, Zhang YH
Five new secondary metabolites produced by a marine-associated fungus, Daldinia eschscholzii
Marine Drugs 12(11) (2014)
5563-5575
a-D-Ribf-(1-6)-Subst
Subst = orthosporin = SMILES C{10}[C@@H](CC1=CC2=C(C(O1)=O){8}C(O)=C{6}C(O)=C2)O |
Show graphically |
Daldinia eschscholtzii
(previously named: Sphaeria eschscholtzii; later renamed to: Daldinia eschscholzii)
(NCBI TaxID 292717,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Host organism: Scaevola sericea
Organ / tissue: branch
The structure was elucidated in this paperNCBI PubMed ID: 25419997Publication DOI: 10.3390/md12115563Journal NLM ID: 101213729Publisher: Basel, Switzerland: Molecular Diversity Preservation International
Correspondence: Wang JP <jpwang1001

163.com>; Zhang YH <zhangyh

mails.tjmu.edu.cn>; Hu ZX <hzx616

126.com>; Xue YB <yongboxue

mail.hust.edu.cn>; Bi XB <bxbin8353

163.com>; Luo ZW <luozengwei

gmail.com>; Yao GM <gyap

mail.hust.edu.cn>; Zhang JW <tjzhangjinwen

163.com>; Li XN <lixiaonian

mail.kib.ac.cn>
Institutions: State Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China, Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China, Tongji Hospital Affiliated to Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
Five new compounds, including a benzopyran ribonic glycoside, daldiniside A (1), two isocoumarin ribonic glycosides, daldinisides B (2) and C (3), and two alkaloids, 1-(3-indolyl)-2R,3-dihydroxypropan-1-one (4) and 3-ethyl-2, 5-pyrazinedipropanoic acid (5), along with five known compounds (6-10), were isolated from the EtOAc extract of the marine-associated fungus, Daldinia eschscholzii. Their structures were elucidated by extensive physicochemical and spectroscopic properties, besides comparison with literature data. The absolute configurations of compounds 1-3 were corroborated by chemical transformation, GC analysis and X-ray crystallographic analysis. Meanwhile, the absolute configuration of compound 4 and the planar structure of compound 6 were also determined based on the X-ray diffraction analysis. The cytotoxicity of compounds 1-10, antifungal and anti-HIV activities of compounds 1-5 and the in vitro assay for glucose consumption of compounds 1-3 were done in the anti-diabetic model, whereas none showed obvious activity.
hydrolysis, secondary metabolites, marine-associated fungus, Daldinia eschscholzii, GC analysis, X-ray diffraction analysis
Structure type: monomer ; 391.0994 [M+Na]+
C
17H
20O
9Location inside paper: compound 3, fig. 1(3), table 1(3)
Trivial name: daldiniside C
Compound class: phenolic glycoside
Contained glycoepitopes: IEDB_149136
Methods: 13C NMR, 1H NMR, X-ray, HPLC, UV, cytotoxicity assay, HMBC, COSY, NOESY, antifungal activity assay, FT-IR, HRESIMS, TFA hydrolysis, GС
Comments, role: NMR temperature was not specified
Related record ID(s): 47451, 47452
NCBI Taxonomy refs (TaxIDs): 292717
Show glycosyltransferases
NMR conditions: in C5D5N
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6 C7 C8 C9 C10 C11 C12 C13
6 aDRibf 102.1 74.1 71.3 89.0 63.4
Subst 167.0 - 156.7 106.7 140.5 104.3 165.9 103.7 164.1 101.5 44.3 65.4 24.4
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6 H7 H8 H9 H10 H11 H12 H13
6 aDRibf 6.17 4.87 4.85 4.88 4.12-4.17
Subst - - - 6.40 - 6.70 - 6.89 - - 2.67-2.74 4.45 1.40
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6 C7/H7 C8/H8 C9/H9 C10/H10 C11/H11 C12/H12 C13/H13
6 aDRibf 102.1/6.17 74.1/4.87 71.3/4.85 89.0/4.88 63.4/4.12-4.17
Subst 106.7/6.40 104.3/6.70 103.7/6.89 44.3/2.67-2.74 65.4/4.45 24.4/1.40
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 | H7 | H8 | H9 | H10 | H11 | H12 | H13 |
6 | aDRibf | 6.17 | 4.87 | 4.85 | 4.88 | 4.12 4.17 | |
| Subst |
|
|
| 6.40 |
| 6.70 |
| 6.89 |
|
| 2.67 2.74 | 4.45 | 1.40 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 | C10 | C11 | C12 | C13 |
6 | aDRibf | 102.1 | 74.1 | 71.3 | 89.0 | 63.4 | |
| Subst | 167.0 |
| 156.7 | 106.7 | 140.5 | 104.3 | 165.9 | 103.7 | 164.1 | 101.5 | 44.3 | 65.4 | 24.4 |
|
 The spectrum also has 1 signal at unknown position (not plotted). |
There is only one chemically distinct structure:
Expand this record
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