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Mao W, Wang B, Zhou L, Gu Q, Chen Y, Zhao C, Li N, Wang C, Shan J, Yan M, Lin C
Preparation and structural elucidation of a glucomannogalactan from marine fungus Penicillium commune
Bioresource Technology 132 (2013)
178-181
|
/Variants 0/-+
|
-5)-b-D-Galf-(1-5)-b-D-Galf-(1-
/Variants 0/ is:
P-6)-
OR (exclusively)
b-D-Galf-(1-6)- |
Show graphically |
Penicillium griseofulvum
(NCBI TaxID 5078,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
The structure was elucidated in this paperNCBI PubMed ID: 23411445Publication DOI: 10.1016/j.biortech.2012.12.075Journal NLM ID: 9889523Publisher: Elsevier
Correspondence: Mao W <wenjunmqd

hotmail.com>
Institutions: Key Laboratory of Marine Drugs, Ministry of Education, Institute of Marine Drug and Food, Ocean University of China, Qingdao, China, College of Food and Pharmacy, Zhejiang Ocean University, Zhoushan, China
The deep-sea fungus Penicillium griseofulvum produces an extracellular polysaccharide, Ps1-1, when grown in potato dextrose-agar medium. Ps1-1 was isolated from the fermented broth using ethanol precipitation, anion-exchange and size-exclusion chromatography. Ps1-1 is a galactomannan with a molecular weight of about 20 kDa, and a molar ratio of mannose and glucose of 1.1:1.0. On the basis of one- and two-dimensional nuclear magnetic resonance (1D and 2D NMR) and mass spectroscopic analyses, Ps1-1 is composed of a long chain of galactofuranan and a mannose core. The galactofuranan chain consists of (1→5)-linked β-galactofuranose, with additional branches at C-6 consisting of (1→)-linked β-galactofuranose residues and phosphate esters. The mannan core is composed of (1→6)-linked α-mannopyranose substituted at C-2 by (1→)-linked α-mannopyranose residues, disaccharide and trisaccharide units of (1→2)-linked α-mannopyranose. The investigation demonstrated that Ps1-1 was a galactofuranose-containing galactomannan differing from previously described extracellular polysaccharides.
characterization, extracellular polysaccharide, preparation, deep-sea fungus, Penicillium griseofulvum
Structure type: fragment of a bigger structure
Location inside paper: p. 181, column 1, paragraph 4, Ps1-1
Compound class: EPS, galactofuranan
Contained glycoepitopes: IEDB_136095,IEDB_137472,IEDB_149137,IEDB_149176,IEDB_190606,IEDB_885812
Methods: 13C NMR, 1H NMR, IR, acetolysis, partial hydrolysis, RP-HPLC, dialysis, HPGPC, phenol-sulfuric acid assay, HMBC, HMQC, COSY, methylation assay, Lowry method, centrifugaiton, ion-exhange chromatography
Comments, role: long chain attached to mannan core; total mass of ID 48503 and 48504 is 20000 Da; D configuration of Galp residues was assumed by CSDB staff; overall percetage of branched residues is 20 %
Related record ID(s): 44840, 48504
NCBI Taxonomy refs (TaxIDs): 5078
Show glycosyltransferases
NMR conditions: in D2O at 296 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
5 bDGalf 108.4 83.8 77.5 82.5 76.5 68.0
bDGalf 108.2 82.5 77.5 82.5 76.5 60.5
5,6 bDGalf 109.0 82.5 77.5 82.5 70.4 60.5
5,6 P
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
5 bDGalf 5.21 7.16 4.12 4.17 3.89 3.69
bDGalf 5.22 4.18 4.13 4.17 3.89 3.71-3.84
5,6 bDGalf 5.25 4.17 4.13 4.17 3.96 3.80
5,6 P
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
5 bDGalf 108.4/5.21 83.8/7.16 77.5/4.12 82.5/4.17 76.5/3.89 68.0/3.69
bDGalf 108.2/5.22 82.5/4.18 77.5/4.13 82.5/4.17 76.5/3.89 60.5/3.71-3.84
5,6 bDGalf 109.0/5.25 82.5/4.17 77.5/4.13 82.5/4.17 70.4/3.96 60.5/3.80
5,6 P
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 5 | bDGalf | 5.21 | 7.16 | 4.12 | 4.17 | 3.89 | 3.69 |
| | bDGalf | 5.22 | 4.18 | 4.13 | 4.17 | 3.89 | 3.71 3.84 |
| 5,6 | bDGalf | 5.25 | 4.17 | 4.13 | 4.17 | 3.96 | 3.80 |
| 5,6 | P | |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 5 | bDGalf | 108.4 | 83.8 | 77.5 | 82.5 | 76.5 | 68.0 |
| | bDGalf | 108.2 | 82.5 | 77.5 | 82.5 | 76.5 | 60.5 |
| 5,6 | bDGalf | 109.0 | 82.5 | 77.5 | 82.5 | 70.4 | 60.5 |
| 5,6 | P | |
|
There is only one chemically distinct structure:
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Mao W, Wang B, Zhou L, Gu Q, Chen Y, Zhao C, Li N, Wang C, Shan J, Yan M, Lin C
Preparation and structural elucidation of a glucomannogalactan from marine fungus Penicillium commune
Bioresource Technology 132 (2013)
178-181
|
?%a-D-Manp-(1-2)-?%a-D-Manp-(1-2)-?%a-D-Manp-(1-2)-+
|
-6)-a-D-Manp-(1- |
Show graphically |
Penicillium griseofulvum
(NCBI TaxID 5078,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
The structure was elucidated in this paperNCBI PubMed ID: 23411445Publication DOI: 10.1016/j.biortech.2012.12.075Journal NLM ID: 9889523Publisher: Elsevier
Correspondence: Mao W <wenjunmqd

hotmail.com>
Institutions: Key Laboratory of Marine Drugs, Ministry of Education, Institute of Marine Drug and Food, Ocean University of China, Qingdao, China, College of Food and Pharmacy, Zhejiang Ocean University, Zhoushan, China
The deep-sea fungus Penicillium griseofulvum produces an extracellular polysaccharide, Ps1-1, when grown in potato dextrose-agar medium. Ps1-1 was isolated from the fermented broth using ethanol precipitation, anion-exchange and size-exclusion chromatography. Ps1-1 is a galactomannan with a molecular weight of about 20 kDa, and a molar ratio of mannose and glucose of 1.1:1.0. On the basis of one- and two-dimensional nuclear magnetic resonance (1D and 2D NMR) and mass spectroscopic analyses, Ps1-1 is composed of a long chain of galactofuranan and a mannose core. The galactofuranan chain consists of (1→5)-linked β-galactofuranose, with additional branches at C-6 consisting of (1→)-linked β-galactofuranose residues and phosphate esters. The mannan core is composed of (1→6)-linked α-mannopyranose substituted at C-2 by (1→)-linked α-mannopyranose residues, disaccharide and trisaccharide units of (1→2)-linked α-mannopyranose. The investigation demonstrated that Ps1-1 was a galactofuranose-containing galactomannan differing from previously described extracellular polysaccharides.
characterization, extracellular polysaccharide, preparation, deep-sea fungus, Penicillium griseofulvum
Structure type: fragment of a bigger structure
Location inside paper: p. 181, column 1, paragraph 4, Ps1-1
Compound class: EPS, mannan
Contained glycoepitopes: IEDB_130701,IEDB_136104,IEDB_140116,IEDB_141793,IEDB_141795,IEDB_141828,IEDB_141829,IEDB_141830,IEDB_141831,IEDB_141832,IEDB_141833,IEDB_143632,IEDB_144983,IEDB_152206,IEDB_153220,IEDB_153762,IEDB_153763,IEDB_164480,IEDB_76933,IEDB_857732,IEDB_857735,IEDB_983930,SB_136,SB_191,SB_196,SB_198,SB_44,SB_67,SB_72
Methods: 13C NMR, 1H NMR, IR, acetolysis, partial hydrolysis, RP-HPLC, dialysis, HPGPC, phenol-sulfuric acid assay, HMBC, HMQC, COSY, methylation assay, Lowry method, centrifugaiton, ion-exhange chromatography
Comments, role: mannan core; total mass of ID 48503 and 48504 is 20000 Da; D configuration of Manp residues was assumed by CSDB staff
Related record ID(s): 44840, 48503
NCBI Taxonomy refs (TaxIDs): 5078Reference(s) to other database(s): GTC:G53740HA
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There is only one chemically distinct structure:
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Zhang Y, Zeng Y, Men Y, Zhang JG, Liu HM, Sun YX
Structural characterization and immunomodulatory activity of exopolysaccharides from submerged culture of Auricularia auricula-judae
International Journal of Biological Macromolecules 115 (2018)
978-984
Auricularia auricula-judae
(NCBI TaxID 29892,
species name lookup)
Taxonomic group: fungi / Basidiomycota
(Phylum: Basidiomycota)
The structure was elucidated in this paperNCBI PubMed ID: 29715555Publication DOI: 10.1016/j.ijbiomac.2018.04.145Journal NLM ID: 7909578Publisher: Butterworth-Heinemann
Correspondence: Zhang AQ <zeng_y

tib.cas.cn>
Institutions: National Engineering Laboratory for Industrial Enzymes, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China, Sinofn (Tianjin) Pharmacy Technology Co.,Ltd., 60 Weiliu Road, Tianjin Airport Economic Area, Tianjin, China
Submerged culture of Auricularia auricula-judae has been documented, but there have been few studies on the structural characterization and medicinal properties of its exopolysaccharides. In present study, two exopolysaccharides, named CEPSN-1 and CEPSN-2, were isolated from submerged culture of A. auricula-judae, and their structural features as well as immunomodulatory activity were analyzed. The two exopolysaccharides both had a backbone chain composed of (1→4)-α-d-glucose residues in glucopyranose type. At the tested concentration range of 50-200 μg/mL, CEPSN-1 and CEPSN-2 not only showed non-toxicity to RAW 264.7 cells, but also could promote the release of NO and cytokines (IL-6, IL-10 and TNF-α) in the cells. The release of NO was significantly enhanced by the two exopolysaccharides at 100 μg/mL (p < 0.05). The IL-10 secretion was significantly increased by 1.80 and 1.61-fold, compared to the control after treatment with 50 μg/mL of CEPSN-1 and CEPSN-2, respectively (p < 0.05). These results demonstrated that, though their structural feature were different from that of polysaccharides from fruit body, exopolysaccharides of A. auricula-judae from submerged culture with the backbone of (1→4)-α-D-glucan could be explored as potential immunomodulatory agents for the application in complementary medicine or functional foods.
exopolysaccharides, immunomodulatory activity, Structural characterization, A. auricula-judae
Structure type: fragment of a bigger structure
Location inside paper: Abstract, CEPSN-1, CEPSN-2, fig. 3
Trivial name: α-D-glucan, glycogen, amylose-like α-D-glucan
Compound class: EPS, cell wall polysaccharide
Contained glycoepitopes: IEDB_140629,IEDB_142488,IEDB_144998,IEDB_146664,IEDB_420417,IEDB_420418,IEDB_420421,IEDB_857742,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, IR, GC-MS, ELISA, HPLC, statistical analysis, DEAE, methylation analysis, dialysis, determination of NO production, precipitation, phenol-sulfuric acid assay, MTT, TFA hydrolysis, centrifugaiton
Biological activity: promotes the release of NO and cytokines (IL-6, IL-10 and TNF-α) in RAW264.7 cells
Comments, role: main chain of the branched polysaccharides, branches attach at 6 positions; molecular weight of branched CEPSN-1 = 4600; CEPSN-2 = 6700 Da
NCBI Taxonomy refs (TaxIDs): 29892Reference(s) to other database(s): GTC:G05740LL
Show glycosyltransferases
NMR conditions: in D2O
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
aDGlcp 100.1 71.6 73.5 77.1 71.2 60.7
1H NMR data: present in publication
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| | aDGlcp | 100.1 | 71.6 | 73.5 | 77.1 | 71.2 | 60.7 |
|
There is only one chemically distinct structure:
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