Taxonomic group: fungi / Basidiomycota
(Phylum: Basidiomycota)
Organ / tissue: fruiting bodies
The structure was elucidated in this paperNCBI PubMed ID: 35155369Publication DOI: 10.3389/fchem.2022.825127Journal NLM ID: 101627988Publisher: Lausanne: Frontiers Media S.A.
Correspondence: Y. Zhang <snowwinglv

126.com>; R.L. Zhao <zhaorl

im.ac.cn>; W.Y. Kang <kangweny

hotmail.com>
Institutions: State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China, National R & D Center for Edible Fungus Processing Technology, Henan University, Kaifeng, China, Hebei Food Inspection and Research Institute, Shijiazhuang, China
Pleurotus placentodes, a fungus, belongs to the Pleurotaceae family. The aim of the present study was to characterize the structure of a novel polysaccharide from fruiting bodies of P. placentodes (PPp-W) and evaluate its anticoagulant activity in vitro. The high-performance liquid chromatography and GC-MS analysis indicated that PPp-W with a molecular weight of 27.4 kDa was mainly composed of mannose (17.56%), glucose (6.37%), galactose (44.89%), and fucose (1.22%) with a certain amount of 3-O-methyled galactose. SEM, XRD, and AFM combined with Congo red test revealed that PPp-W was an irregular curly sheet with triple-helix conformation. The FT-IR, methylation, and nuclear magnetic resonance analysis indicated that PPp-W contained→6)-α-D-Galp-(1→, →6)-3-O-Me-α-D-Galp-(1→and →2,6)-α-D-Galp-(1→ as main chain, partially substituted at O-2 and O-6 by non-reducing ends of β-D-Manp-(1→ and β-L-Fucp-(1→ with a small amount of α-1,3-linked-Glcp in backbone. PPp-W could significantly prolong APTT (12.9 ± 0.42 s, p < 0.001) and thrombin time (39.9 ± 0.28 s, p < 0.01) compared with the control group (11.45 ± 0.071 s and 38.05 ± 0.21 s), which showed that PPp-W had anticoagulant activity. These studies suggested that PPp-W was a 3-O-methylated heteroglycan and might be suitable for functional foods and natural drugs as an anticoagulant ingredient, which provided a basis for the application of polysaccharides from P. placentodes.
polysaccharide, structure identification, 3-O-methylated heteroglycan, Pleurotus placentodes
Structure type: fragment of a bigger structure
Location inside paper: Fig. 7, table 2, fragment of the PPp-W
Trivial name: polysaccharide PPp-W
Contained glycoepitopes: IEDB_134624,IEDB_136906,IEDB_137472,IEDB_137485,IEDB_141794,IEDB_142489,IEDB_144562,IEDB_144983,IEDB_151528,IEDB_152206,IEDB_152214,IEDB_190606,IEDB_983930,SB_163,SB_44,SB_7,SB_72,SB_86
Methods: 13C NMR, 1H NMR, NMR-2D, methylation, GC-MS, sugar analysis, FTIR, HPLC, statistical analysis, SEM, AFM, XRD, Congo red test, hot water extraction, determination of anticoagulant activity
Comments, role: NMR temperature was not specified; NMR data of →6)-α-D-Galp-(1→ (C) residue 1H: 5.01 3.87 3.95 4.03 4.20 3.68-3.92; 13C: 100.71 71.16 71.44 72.29 71.85 69.44.
Related record ID(s): 51875
NCBI Taxonomy refs (TaxIDs): 1658514
Show glycosyltransferases
NMR conditions: in D2O
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
?,6,2 bDManp 104.49 73.39 75.75 72.5 79.09 63.88
?,6,6,6 bLFucp 105.59 75.98 75.73 71.15 72.06 18.26
?,6,6,3 %Me 58.90
?,6,6 aDGalp 100.71 72.33 81.58 68.00 72.26 68.44
?,6 aDGalp 101.22 79.77 71.65 71.79 69.17 69.50
?,3 %Me 58.90
? aDGalp 100.71 72.33 81.58 68.00 72.26 68.44
SUG
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
?,6,2 bDManp 4.80 3.90 3.62 3.50 3.39 3.75-3.94
?,6,6,6 bLFucp 4.51 3.34 3.64 3.82 4.13 1.23
?,6,6,3 %Me 3.46
?,6,6 aDGalp 5.01 3.87 3.58 4.30 3.96 3.68-3.92
?,6 aDGalp 5.15 3.97 4.19 4.22 3.93 3.60-3.70
?,3 %Me 3.46
? aDGalp 5.01 3.87 3.58 4.30 3.96 3.68-3.92
SUG
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
?,6,2 bDManp 104.49/4.80 73.39/3.90 75.75/3.62 72.5/3.50 79.09/3.39 63.88/3.75-3.94
?,6,6,6 bLFucp 105.59/4.51 75.98/3.34 75.73/3.64 71.15/3.82 72.06/4.13 18.26/1.23
?,6,6,3 %Me 58.90/3.46
?,6,6 aDGalp 100.71/5.01 72.33/3.87 81.58/3.58 68.00/4.30 72.26/3.96 68.44/3.68-3.92
?,6 aDGalp 101.22/5.15 79.77/3.97 71.65/4.19 71.79/4.22 69.17/3.93 69.50/3.60-3.70
?,3 %Me 58.90/3.46
? aDGalp 100.71/5.01 72.33/3.87 81.58/3.58 68.00/4.30 72.26/3.96 68.44/3.68-3.92
SUG
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
?,6,2 | bDManp | 4.80 | 3.90 | 3.62 | 3.50 | 3.39 | 3.75 3.94 |
?,6,6,6 | bLFucp | 4.51 | 3.34 | 3.64 | 3.82 | 4.13 | 1.23 |
?,6,6,3 | %Me | 3.46 | |
?,6,6 | aDGalp | 5.01 | 3.87 | 3.58 | 4.30 | 3.96 | 3.68 3.92 |
?,6 | aDGalp | 5.15 | 3.97 | 4.19 | 4.22 | 3.93 | 3.60 3.70 |
?,3 | %Me | 3.46 | |
? | aDGalp | 5.01 | 3.87 | 3.58 | 4.30 | 3.96 | 3.68 3.92 |
| SUG | |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
?,6,2 | bDManp | 104.49 | 73.39 | 75.75 | 72.5 | 79.09 | 63.88 |
?,6,6,6 | bLFucp | 105.59 | 75.98 | 75.73 | 71.15 | 72.06 | 18.26 |
?,6,6,3 | %Me | 58.90 | |
?,6,6 | aDGalp | 100.71 | 72.33 | 81.58 | 68.00 | 72.26 | 68.44 |
?,6 | aDGalp | 101.22 | 79.77 | 71.65 | 71.79 | 69.17 | 69.50 |
?,3 | %Me | 58.90 | |
? | aDGalp | 100.71 | 72.33 | 81.58 | 68.00 | 72.26 | 68.44 |
| SUG | |
|
There is only one chemically distinct structure:
Taxonomic group: fungi / Basidiomycota
(Phylum: Basidiomycota)
Organ / tissue: fruiting bodies
The structure was elucidated in this paperNCBI PubMed ID: 35155369Publication DOI: 10.3389/fchem.2022.825127Journal NLM ID: 101627988Publisher: Lausanne: Frontiers Media S.A.
Correspondence: Y. Zhang <snowwinglv

126.com>; R.L. Zhao <zhaorl

im.ac.cn>; W.Y. Kang <kangweny

hotmail.com>
Institutions: State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China, National R & D Center for Edible Fungus Processing Technology, Henan University, Kaifeng, China, Hebei Food Inspection and Research Institute, Shijiazhuang, China
Pleurotus placentodes, a fungus, belongs to the Pleurotaceae family. The aim of the present study was to characterize the structure of a novel polysaccharide from fruiting bodies of P. placentodes (PPp-W) and evaluate its anticoagulant activity in vitro. The high-performance liquid chromatography and GC-MS analysis indicated that PPp-W with a molecular weight of 27.4 kDa was mainly composed of mannose (17.56%), glucose (6.37%), galactose (44.89%), and fucose (1.22%) with a certain amount of 3-O-methyled galactose. SEM, XRD, and AFM combined with Congo red test revealed that PPp-W was an irregular curly sheet with triple-helix conformation. The FT-IR, methylation, and nuclear magnetic resonance analysis indicated that PPp-W contained→6)-α-D-Galp-(1→, →6)-3-O-Me-α-D-Galp-(1→and →2,6)-α-D-Galp-(1→ as main chain, partially substituted at O-2 and O-6 by non-reducing ends of β-D-Manp-(1→ and β-L-Fucp-(1→ with a small amount of α-1,3-linked-Glcp in backbone. PPp-W could significantly prolong APTT (12.9 ± 0.42 s, p < 0.001) and thrombin time (39.9 ± 0.28 s, p < 0.01) compared with the control group (11.45 ± 0.071 s and 38.05 ± 0.21 s), which showed that PPp-W had anticoagulant activity. These studies suggested that PPp-W was a 3-O-methylated heteroglycan and might be suitable for functional foods and natural drugs as an anticoagulant ingredient, which provided a basis for the application of polysaccharides from P. placentodes.
polysaccharide, structure identification, 3-O-methylated heteroglycan, Pleurotus placentodes
Structure type: fragment of a bigger structure
Location inside paper: Fig. 7, table 2, fragment of the PPp-W
Trivial name: polysaccharide PPp-W
Contained glycoepitopes: IEDB_134624,IEDB_136906,IEDB_137472,IEDB_137485,IEDB_141794,IEDB_142488,IEDB_144983,IEDB_144998,IEDB_146664,IEDB_151528,IEDB_152206,IEDB_190606,IEDB_983930,IEDB_983931,SB_163,SB_192,SB_44,SB_7,SB_72
Methods: 13C NMR, 1H NMR, NMR-2D, methylation, GC-MS, sugar analysis, FTIR, HPLC, statistical analysis, SEM, AFM, XRD, Congo red test, hot water extraction, determination of anticoagulant activity
Comments, role: NMR temperature was not specified; NMR data of →6)-α-D-Galp-(1→ (C) residue 1H: 5.01 3.87 3.95 4.03 4.20 3.68-3.92; 13C: 100.71 71.16 71.44 72.29 71.85 69.44.
Related record ID(s): 51690
NCBI Taxonomy refs (TaxIDs): 1658514
Show glycosyltransferases
NMR conditions: in D2O
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
?,2 bDManp 104.49 73.39 75.75 72.5 79.09 63.88
?,6,6,3 bDManp 104.49 73.39 75.75 72.5 79.09 63.88
?,6,6 aDGlcp 102.32 72.70 81.59 72.39 73.21 63.86
?,6,3 %Me 58.90
?,6 aDGalp 100.71 72.33 81.58 68.00 72.26 68.44
? aDGalp 101.22 79.77 71.65 71.79 69.17 69.50
SUG
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
?,2 bDManp 4.80 3.90 3.62 3.50 3.39 3.75-3.94
?,6,6,3 bDManp 4.80 3.90 3.62 3.50 3.39 3.75-3.94
?,6,6 aDGlcp 5.38 3.70 3.57 3.37 3.65 3.71-3.82
?,6,3 %Me 3.46
?,6 aDGalp 5.01 3.87 3.58 4.30 3.96 3.68-3.92
? aDGalp 5.15 3.97 4.19 4.22 3.93 3.60-3.70
SUG
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
?,2 bDManp 104.49/4.80 73.39/3.90 75.75/3.62 72.5/3.50 79.09/3.39 63.88/3.75-3.94
?,6,6,3 bDManp 104.49/4.80 73.39/3.90 75.75/3.62 72.5/3.50 79.09/3.39 63.88/3.75-3.94
?,6,6 aDGlcp 102.32/5.38 72.70/3.70 81.59/3.57 72.39/3.37 73.21/3.65 63.86/3.71-3.82
?,6,3 %Me 58.90/3.46
?,6 aDGalp 100.71/5.01 72.33/3.87 81.58/3.58 68.00/4.30 72.26/3.96 68.44/3.68-3.92
? aDGalp 101.22/5.15 79.77/3.97 71.65/4.19 71.79/4.22 69.17/3.93 69.50/3.60-3.70
SUG
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
?,2 | bDManp | 4.80 | 3.90 | 3.62 | 3.50 | 3.39 | 3.75 3.94 |
?,6,6,3 | bDManp | 4.80 | 3.90 | 3.62 | 3.50 | 3.39 | 3.75 3.94 |
?,6,6 | aDGlcp | 5.38 | 3.70 | 3.57 | 3.37 | 3.65 | 3.71 3.82 |
?,6,3 | %Me | 3.46 | |
?,6 | aDGalp | 5.01 | 3.87 | 3.58 | 4.30 | 3.96 | 3.68 3.92 |
? | aDGalp | 5.15 | 3.97 | 4.19 | 4.22 | 3.93 | 3.60 3.70 |
| SUG | |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
?,2 | bDManp | 104.49 | 73.39 | 75.75 | 72.5 | 79.09 | 63.88 |
?,6,6,3 | bDManp | 104.49 | 73.39 | 75.75 | 72.5 | 79.09 | 63.88 |
?,6,6 | aDGlcp | 102.32 | 72.70 | 81.59 | 72.39 | 73.21 | 63.86 |
?,6,3 | %Me | 58.90 | |
?,6 | aDGalp | 100.71 | 72.33 | 81.58 | 68.00 | 72.26 | 68.44 |
? | aDGalp | 101.22 | 79.77 | 71.65 | 71.79 | 69.17 | 69.50 |
| SUG | |
|
There is only one chemically distinct structure: