Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Associated disease: nosocomial infections [ICD11:
XB25 
];
urinary tract infections (UTI) [ICD11:
GC08 
];
bacteremia [ICD11:
MA15.0 
];
septicemia [ICD11:
MA15.Y 
];
infection due to Klebsiella pneumoniae [ICD11:
XN741 
]
The structure was elucidated in this paperNCBI PubMed ID: 31138653Publication DOI: 10.1074/jbc.RA119.008969Journal NLM ID: 2985121RPublisher: Baltimore, MD: American Society for Biochemistry and Molecular Biology
Correspondence: Chris Whitfield <cwhitfie

uoguelph.ca>
Institutions: Alberta Glycomics Centre and Department of Chemistry, University of Alberta, Edmonton, AB, Canada, Department of Molecular and Cellular Biology, University of Guelph, Ontario, Canada
A limited range of different structures is observed in O-antigenic polysaccharides (OPSs) from Klebsiella pneumoniae lipopolysaccharides. Among these, several are based on modifications of a conserved core element of serotype O2a OPS, which has a disaccharide repeat structure [→3)-α-Galp-(1→3)-β-Galf-(1→]. Here, we describe the enzymatic pathways for a highly unusual modification strategy involving the attachment of a second glycan repeat unit structure to the non-reducing terminus of O2a. This occurs by the addition of the O1 [→3)-α-Galp-(1→3)-β-Galp-(1→] or O2c [→3)-β-GlcpNAc-(1→5)-β-Galf-(1→] antigens. The organization of the enzyme activities performing these modifications differs, with the enzyme WbbY possessing two glycosyltransferase catalytic sites solely responsible for O1-antigen polymerization and forming a complex with the O2a glycosyltransferase, WbbM. In contrast, O2c polymerization requires glycosyltransferases WbmV and WbmW, which interact with one another, but apparently not with WbbM. Using defined synthetic acceptors and site-directed mutants to assign the activities of the WbbY catalytic sites, we found that the C-terminal WbbY domain is a UDP-Galp-dependent GT-A galactosyltransferase adding β-(1→3)-linked D-Galp, whereas the WbbY N terminus includes a GT-B enzyme adding α-(1→3)-linked D-Galp These activities build the O1 antigen on a terminal Galp in the O2a domain. Using similar approaches, we identified WbmV as the UDP-GlcNAc-dependent transferase and noted that WbmW represents a UDP-Galf-dependent enzyme and that both are GT-A members. WbmVW polymerizes the O2c antigen on a terminal Galf Our results provide mechanistic and conceptual insights into an important strategy for polysacharide antigen diversification in bacteria.
polysaccharide, O antigen, Gram-negative bacteria, glycosyltransferase, Klebsiella pneumoniae, serotyping, lipopolysaccharide (LPS), antigenic diversity, cell surface, enzyme complex
Structure type: oligomer
Location inside paper: fig.3, fig.S1, table 1, O1 OPS
Aglycon: (1->1) 8-(fluoresceinthiourea)-octanol (FL)
Compound class: O-polysaccharide
Contained glycoepitopes: IEDB_115013,IEDB_130645,IEDB_136044,IEDB_136095,IEDB_136906,IEDB_137472,IEDB_141794,IEDB_149558,IEDB_151528,IEDB_190606,IEDB_918314,SB_165,SB_166,SB_187,SB_195,SB_7,SB_87,SB_88
Methods: 13C NMR, 1H NMR, gel filtration, NMR-2D, PCR, DNA sequencing, SDS-PAGE, TLC, chemical synthesis, HPLC, UV, immunoblotting, LC-MS, bioinformatic analysis, CC, LC-ESI-MS, enzymatic synthesis, fluorescent labeling
Enzymes that release or process the structure: WbbY polymerase
Synthetic data: chemoenzymatic
Comments, role: E. coli K-12 mutant strain (His(6)-WbbY); in vitro synthesis O1 OPS from synthetic acceptor aDGalp(1-3)bDGalf-FL (disaccharide 2).
Related record ID(s): 792, 793, 794, 795, 796, 797, 798
NCBI Taxonomy refs (TaxIDs): 83333,
573Reference(s) to other database(s): GTC:G54791DS
Show glycosyltransferases
NMR conditions: in D2O at 323 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3,3,3 aDGalp 96.7 68.7 80.4 70.5 71.9 62.3
3,3 bDGalp 105.5 71.0 78.6 66.2 76.1 62.3
3 aDGalp 100.9 68.6 80.5 ? ? ?
bDGalf 108.9 80.5 86.2 83.4 72.3 64.2
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
3,3,3 aDGalp 5.19 4.07 4.16 4.29 4.24 3.75
3,3 bDGalp 4.71 3.78 3.80 4.20 3.70 3.78-3.82
3 aDGalp 5.07 4.00 4.00 4.25 ? ?
bDGalf 4.97 4.22 4.04 4.14 3.86 3.67
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
3,3,3 aDGalp 96.7/5.19 68.7/4.07 80.4/4.16 70.5/4.29 71.9/4.24 62.3/3.75
3,3 bDGalp 105.5/4.71 71.0/3.78 78.6/3.80 66.2/4.20 76.1/3.70 62.3/3.78-3.82
3 aDGalp 100.9/5.07 68.6/4.00 80.5/4.00 ?/4.25 ?/? ?/?
bDGalf 108.9/4.97 80.5/4.22 86.2/4.04 83.4/4.14 72.3/3.86 64.2/3.67
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 3,3,3 | aDGalp | 5.19 | 4.07 | 4.16 | 4.29 | 4.24 | 3.75 |
| 3,3 | bDGalp | 4.71 | 3.78 | 3.80 | 4.20 | 3.70 | 3.78 3.82 |
| 3 | aDGalp | 5.07 | 4.00 | 4.00 | 4.25 | ? | ? |
| | bDGalf | 4.97 | 4.22 | 4.04 | 4.14 | 3.86 | 3.67 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3,3,3 | aDGalp | 96.7 | 68.7 | 80.4 | 70.5 | 71.9 | 62.3 |
| 3,3 | bDGalp | 105.5 | 71.0 | 78.6 | 66.2 | 76.1 | 62.3 |
| 3 | aDGalp | 100.9 | 68.6 | 80.5 | ? | ? | ? |
| | bDGalf | 108.9 | 80.5 | 86.2 | 83.4 | 72.3 | 64.2 |
|
 The spectrum also has 3 signals at unknown positions (not plotted). |
There is only one chemically distinct structure: