Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Associated disease: infection due to Escherichia coli [ICD11:
XN6P4 
]
NCBI PubMed ID: 7506030Journal NLM ID: 7804941Publisher: Moskva: Nauka
Institutions: N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow
A computer evaluation of 13C-NMR data for the title polysaccharides based on the monosaccharide and methylation analysis data led to the structure of the repeating unit of the O1A polysaccharide as well as to several probable structures of the O1C polysaccharide, of which the correct one was inferred by means of a single NOE experiment. The analysis of the spectrum of the O1B polysaccharide was unsuccessful, due to the presence in its structure of the fragment α-L-Rha-(1→2)-α-D-Gal-(1→3)-D-GlcNAc with the terminal (1→2)-linkage, whose spectral data could not be calculated by additive schemes using only glycosylation effects. However in reevaluation of the O1B spectral data by taking into account the deviations from additivities of the chemical shifts values in spectra of the related trisaccharides, to reveal the most probable structure of the O1B's repeating unit. [formula: see text]
Structure type: polymer chemical repeating unit
Location inside paper: p.986, structure (24)
Compound class: O-polysaccharide, O-antigen
Contained glycoepitopes: IEDB_130669,IEDB_133754,IEDB_135813,IEDB_136105,IEDB_136906,IEDB_137340,IEDB_137472,IEDB_141794,IEDB_141807,IEDB_151528,IEDB_151531,IEDB_190606,IEDB_225177,IEDB_885813,IEDB_885823,SB_7
Methods: 13C NMR
Related record ID(s): 22551, 110886
NCBI Taxonomy refs (TaxIDs): 562Reference(s) to other database(s): GTC:G44507NV, GlycomeDB:
28092
Show glycosyltransferases
NMR conditions: in D2O
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3,2,2,2,2 Ac
3,2,2,2 bDManpN 101.0 54.2 73.3 68.1 77.4 61.8
3,2,2 aLRhap 102.2 78.1 80.0 72.4 70.6 17.9
3,2 aLRhap 101.2 78.8 71.2 73.4 70.4 17.9
3 aDGalp 98.6 74.8 70.2 70.1 72.2 61.9
2 Ac
bDGlcpN 102.8 55.9 78.6 72.7 76.8 61.9
1H NMR data:
missing...
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3,2,2,2,2 | Ac | |
| 3,2,2,2 | bDManpN | 101.0 | 54.2 | 73.3 | 68.1 | 77.4 | 61.8 |
| 3,2,2 | aLRhap | 102.2 | 78.1 | 80.0 | 72.4 | 70.6 | 17.9 |
| 3,2 | aLRhap | 101.2 | 78.8 | 71.2 | 73.4 | 70.4 | 17.9 |
| 3 | aDGalp | 98.6 | 74.8 | 70.2 | 70.1 | 72.2 | 61.9 |
| 2 | Ac | |
| | bDGlcpN | 102.8 | 55.9 | 78.6 | 72.7 | 76.8 | 61.9 |
|
There is only one chemically distinct structure: