Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Host organism: Homo sapiens
Organ / tissue: gastrointestinal tract,
skin,
upper airwaysAssociated disease: nosocomial infections [ICD11:
XB25 
];
bloodstream infections [ICD11:
MA15 
];
pneumonia [ICD11:
CA40 
];
meningitis [ICD11:
1D01 
];
septicemia [ICD11:
MA15.Y 
];
infection due to Klebsiella pneumoniae [ICD11:
XN741 
]
The structure was elucidated in this paperNCBI PubMed ID: 28487676Publication DOI: 10.3389/fmicb.2017.00684Journal NLM ID: 101548977Publisher: Lausanne: Frontiers Research Foundation
Correspondence: Jolanta Lukasiewicz <jolanta.lukasiewicz

iitd.pan.wroc.pl>
Institutions: Arsanis Biosciences GmbH, Vienna, Austria, Laboratory of Microbial Immunochemistry and Vaccines, Department of Immunochemistry, Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of SciencesWroclaw, Poland
Klebsiella pneumoniae is a Gram-negative, ubiquitous bacterium capable of causing severe nosocomial infections in individuals with impaired immune system. Emerging multi-drug resistant strains of this species and particularly carbapenem-resistant strains pose an urgent threat to public health. The lipopolysaccharide (LPS) O-antigen is the main surface antigen. It contributes to the virulence of this species and determines the O-serotype of K. pneumoniae isolates. Among the nine main O-serotypes of K. pneumoniae, O1-and O2-type pathogens are causative agents of over 50% of all infections. Serotype O1, the most common O-serotype, expresses complex LPS consisting of d-galactan-I (a polymer built of →3)-β-d-Galf-(1→3)-α-d-Galp-(1→ repeating units) capped by d-galactan-II (built of [→3)-α-d-Galp-(1→3)-β-d-Galp-(1→] repeating units). Galactan-I is present as the sole polymer in O2 serotype. Recently, in case of serotype O2, conversion of galactan-I to galactan-III (→3)-β-d-Galf-(1→3)-[α-d-Galp-(1→4)]-α-d-Galp-(1→) was reported. Substitution of →3)-α-d-Galp by a branching terminal α-d-Galp was dependent on the presence of the gmlABC operon and had a major impact on the antigenicity of the galactan polymer. Genetic analysis indicated that 40% of the O1 clinical isolates also carry the gmlABC locus; therefore we aimed to characterize the corresponding phenotype of LPS O-antigens. The presence of galactan-III among O1 strains was proven using galactan-III-specific monoclonal antibodies and confirmed by structural analyses performed using sugar and methylation analysis as well as classical and high-resolution magic angle spinning NMR spectroscopy. By using an isogenic mutant pair, we demonstrated that galactan-III expression was dependent on the presence of glycosyltransferases encoded by gmlABC, as was shown previously for the O2 serotype. Furthermore, the galactan-II structures in O1gml+ strains remained unaffected corroborating no functional interactions between the biosynthesis of galactan-III and galactan-II polymers.
Lipopolysaccharide, O-antigen, Klebsiella pneumoniae, Galactan, HR-MAS NMR, d-galactan-I, d-galactan-III, serotype O1
Structure type: polymer chemical repeating unit
Location inside paper: abstract, fig.2A-D, D-galactan-II, table 1, table 2
Trivial name: D-galactan II, galactan II, D-galactan-II
Compound class: CPS, EPS, O-polysaccharide, O-antigen
Contained glycoepitopes: IEDB_115013,IEDB_130645,IEDB_136044,IEDB_136906,IEDB_137472,IEDB_141794,IEDB_149558,IEDB_151528,IEDB_190606,IEDB_918314,SB_165,SB_166,SB_187,SB_195,SB_7,SB_87,SB_88
Methods: 13C NMR, 1H NMR, methylation, gel filtration, NMR-2D, sugar analysis, mild acid hydrolysis, immunoblotting, HR-MAS NMR, cloning, bioinformatic analysis, dialysis
Related record ID(s): 11966, 12239
NCBI Taxonomy refs (TaxIDs): 573Reference(s) to other database(s): GTC:G16623PZ, GlycomeDB:
664
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3 aDGalp 95.9-96.1 68.1-68.2 79.9-80.0 69.9-70.0 71.3-71.4 61.7-61.9
bDGalp 105.1 70.4-70.5 77.7 65.5-65.6 75.6-75.7 61.9-63.5
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
3 aDGalp 5.18-5.19 4.04 4.15 4.29 4.23-4.24 3.73-3.76
bDGalp 4.68-4.69 3.74-3.75 3.80 4.19 3.68 3.68-3.76
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
3 aDGalp 95.9-96.1/5.18-5.19 68.1-68.2/4.04 79.9-80.0/4.15 69.9-70.0/4.29 71.3-71.4/4.23-4.24 61.7-61.9/3.73-3.76
bDGalp 105.1/4.68-4.69 70.4-70.5/3.74-3.75 77.7/3.80 65.5-65.6/4.19 75.6-75.7/3.68 61.9-63.5/3.68-3.76
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 3 | aDGalp | 5.18 5.19 | 4.04 | 4.15 | 4.29 | 4.23 4.24 | 3.73 3.76 |
| | bDGalp | 4.68 4.69 | 3.74 3.75 | 3.80 | 4.19 | 3.68 | 3.68 3.76 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3 | aDGalp | 95.9 96.1 | 68.1 68.2 | 79.9 80.0 | 69.9 70.0 | 71.3 71.4 | 61.7 61.9 |
| | bDGalp | 105.1 | 70.4 70.5 | 77.7 | 65.5 65.6 | 75.6 75.7 | 61.9 63.5 |
|
There is only one chemically distinct structure: