Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Host organism: Homo sapiens
Organ / tissue: gastrointestinal tract,
skin,
upper airwaysAssociated disease: nosocomial infections [ICD11:
XB25 
];
bloodstream infections [ICD11:
MA15 
];
pneumonia [ICD11:
CA40 
];
meningitis [ICD11:
1D01 
];
septicemia [ICD11:
MA15.Y 
];
infection due to Klebsiella pneumoniae [ICD11:
XN741 
]
The structure was elucidated in this paperNCBI PubMed ID: 28487676Publication DOI: 10.3389/fmicb.2017.00684Journal NLM ID: 101548977Publisher: Lausanne: Frontiers Research Foundation
Correspondence: Jolanta Lukasiewicz <jolanta.lukasiewicz

iitd.pan.wroc.pl>
Institutions: Arsanis Biosciences GmbH, Vienna, Austria, Laboratory of Microbial Immunochemistry and Vaccines, Department of Immunochemistry, Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of SciencesWroclaw, Poland
Klebsiella pneumoniae is a Gram-negative, ubiquitous bacterium capable of causing severe nosocomial infections in individuals with impaired immune system. Emerging multi-drug resistant strains of this species and particularly carbapenem-resistant strains pose an urgent threat to public health. The lipopolysaccharide (LPS) O-antigen is the main surface antigen. It contributes to the virulence of this species and determines the O-serotype of K. pneumoniae isolates. Among the nine main O-serotypes of K. pneumoniae, O1-and O2-type pathogens are causative agents of over 50% of all infections. Serotype O1, the most common O-serotype, expresses complex LPS consisting of d-galactan-I (a polymer built of →3)-β-d-Galf-(1→3)-α-d-Galp-(1→ repeating units) capped by d-galactan-II (built of [→3)-α-d-Galp-(1→3)-β-d-Galp-(1→] repeating units). Galactan-I is present as the sole polymer in O2 serotype. Recently, in case of serotype O2, conversion of galactan-I to galactan-III (→3)-β-d-Galf-(1→3)-[α-d-Galp-(1→4)]-α-d-Galp-(1→) was reported. Substitution of →3)-α-d-Galp by a branching terminal α-d-Galp was dependent on the presence of the gmlABC operon and had a major impact on the antigenicity of the galactan polymer. Genetic analysis indicated that 40% of the O1 clinical isolates also carry the gmlABC locus; therefore we aimed to characterize the corresponding phenotype of LPS O-antigens. The presence of galactan-III among O1 strains was proven using galactan-III-specific monoclonal antibodies and confirmed by structural analyses performed using sugar and methylation analysis as well as classical and high-resolution magic angle spinning NMR spectroscopy. By using an isogenic mutant pair, we demonstrated that galactan-III expression was dependent on the presence of glycosyltransferases encoded by gmlABC, as was shown previously for the O2 serotype. Furthermore, the galactan-II structures in O1gml+ strains remained unaffected corroborating no functional interactions between the biosynthesis of galactan-III and galactan-II polymers.
Lipopolysaccharide, O-antigen, Klebsiella pneumoniae, Galactan, HR-MAS NMR, d-galactan-I, d-galactan-III, serotype O1
Structure type: polymer chemical repeating unit
Location inside paper: abstract, fig.2A, fig.2C, D-galactan-III, table 1
Trivial name: D-galactan-III, D-galactan III
Compound class: O-polysaccharide, O-antigen
Contained glycoepitopes: IEDB_136095,IEDB_136906,IEDB_137472,IEDB_141794,IEDB_144987,IEDB_151528,IEDB_190606,SB_31,SB_7
Methods: 13C NMR, 1H NMR, methylation, gel filtration, NMR-2D, sugar analysis, mild acid hydrolysis, immunoblotting, HR-MAS NMR, cloning, bioinformatic analysis, dialysis
Related record ID(s): 11966, 12238
NCBI Taxonomy refs (TaxIDs): 573Reference(s) to other database(s): GTC:G38255JW, GlycomeDB:
16920
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3 bDGalf 110.6 81.4 85.7 80.5 71.0 63.7
4 aDGalp 101.2 69.9 70.0 69.5 71.4 60.9
aDGalp 100.9 68.6 77.7 79.1 73.1 61.1
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
3 bDGalf 5.22 4.34 4.08 4.30 3.86 3.69
4 aDGalp 5.01 3.83 3.92 4.07 4.24 3.79
aDGalp 5.10 4.10 3.95 4.18 4.17 3.91
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
3 bDGalf 110.6/5.22 81.4/4.34 85.7/4.08 80.5/4.30 71.0/3.86 63.7/3.69
4 aDGalp 101.2/5.01 69.9/3.83 70.0/3.92 69.5/4.07 71.4/4.24 60.9/3.79
aDGalp 100.9/5.10 68.6/4.10 77.7/3.95 79.1/4.18 73.1/4.17 61.1/3.91
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 3 | bDGalf | 5.22 | 4.34 | 4.08 | 4.30 | 3.86 | 3.69 |
| 4 | aDGalp | 5.01 | 3.83 | 3.92 | 4.07 | 4.24 | 3.79 |
| | aDGalp | 5.10 | 4.10 | 3.95 | 4.18 | 4.17 | 3.91 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3 | bDGalf | 110.6 | 81.4 | 85.7 | 80.5 | 71.0 | 63.7 |
| 4 | aDGalp | 101.2 | 69.9 | 70.0 | 69.5 | 71.4 | 60.9 |
| | aDGalp | 100.9 | 68.6 | 77.7 | 79.1 | 73.1 | 61.1 |
|
There is only one chemically distinct structure: