Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Associated disease: infection due to Campylobacter jejuni [ICD11:
XN4Q5 
]
The structure was elucidated in this paperNCBI PubMed ID: 16879613Publication DOI: 10.1111/j.1742-4658.2006.05401.xJournal NLM ID: 101229646Publisher: Blackwell Publishing
Correspondence: jean-robert.brisson

nrc-cnrc.gc.ca
Institutions: Institute for Biological Sciences, National Research Council of Canada, Ottawa Ontario, Canada
A recent study that examined multiple strains of Campylobacter jejuni reported that HS:19, a serostrain that has been associated with the onset of Guillain-Barre syndrome, had unidentified labile, capsular polysaccharide (CPS) structures. In this study, we expand on this observation by using current glyco-analytical technologies to characterize these unknown groups. Capillary electrophoresis electrospray ionization MS and NMR analysis with a cryogenically cooled probe (cold probe) of CPS purified using a gentle enzymatic method revealed a hyaluronic acid-type [-4)-β-D-GlcA6NGro-(1-3)-β-D-GlcNAc-(1-]n repeating unit, where NGro is 2-aminoglycerol. A labile α-sorbofuranose branch located at C2 of GlcA was determined to have the L configuration using a novel pyranose oxidase assay and is the first report of this sugar in a bacterial glycan. A labile O-methyl phosphoramidate group, CH3OP(O)(NH2)(OR) (MeOPN), was found at C4 of GlcNAc. Structural heterogeneity of the CPS was due to nonstoichiometric glycosylation with sorbose at C2 of GlcA and the nonstoichiometric, variably methylated phosphoramidate group. Examination of whole bacterial cells using high-resolution magic angle spinning NMR revealed that the MeOPN group is a prominent feature on the cell surface for this serostrain. These results are reminiscent of those in the 11168 and HS:1 strains and suggest that decoration of CPS with nonstoichiometric elements such as keto sugars and the phosphoramidate is a common mechanism used by this bacterium to produce a structurally complex surface glycan from a limited number of genes. The findings of this work with the HS:19 serostrain now present a means to explore the role of CPS as a virulence factor in C. jejuni.
capsular polysaccharide, Campylobacter jejuni, phosphoramidate, high-resolution magic angle spinning (HR-MAS) NMR, sorbose
Structure type: polymer chemical repeating unit
Location inside paper: p 3977, fig. 1
Compound class: CPS
Contained glycoepitopes: IEDB_115136,IEDB_135813,IEDB_137340,IEDB_140630,IEDB_141807,IEDB_151527,IEDB_151531,IEDB_231709,IEDB_423153
Methods: NMR, GC, CE-ESI-MS, HR-MAS NMR
Enzymes that release or process the structure: enzymatic methods: DNAse I, RNAse, Pronase E, protease
3D data: conformation data, computer modeling, dynamics
NCBI Taxonomy refs (TaxIDs): 197
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3,2 %aLSorf 61.5 104.3 79.2 76.1 79.2 62.9
3,6 x?GroN 61.5 53.9 61.5
3 bDGlcpA 101.0 73.8 73.8 79.0 75.1 170.7
2 Ac 175.0 23.5
4 %Subst 54.8
bDGlcpN 100.7 56.1 75.8 74.2 75.5 61.3
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
3,2 %aLSorf 3.64-3.73 - 4.17 4.41 4.39 3.69-3.70
3,6 x?GroN 3.65-3.75 4.07 3.65-3.75
3 bDGlcpA 4.65 3.71 3.71 3.90 4.94 -
2 Ac - 2.11
4 %Subst 3.77
bDGlcpN 4.62 3.97 4.24 4.26 3.61 3.74-3.93
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
3,2 %aLSorf 61.5/3.64-3.73 79.2/4.17 76.1/4.41 79.2/4.39 62.9/3.69-3.70
3,6 x?GroN 61.5/3.65-3.75 53.9/4.07 61.5/3.65-3.75
3 bDGlcpA 101.0/4.65 73.8/3.71 73.8/3.71 79.0/3.90 75.1/4.94
2 Ac 23.5/2.11
4 %Subst 54.8/3.77
bDGlcpN 100.7/4.62 56.1/3.97 75.8/4.24 74.2/4.26 75.5/3.61 61.3/3.74-3.93
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 3,2 | %aLSorf | 3.64 3.73 |
| 4.17 | 4.41 | 4.39 | 3.69 3.70 |
| 3,6 | x?GroN | 3.65 3.75 | 4.07 | 3.65 3.75 | |
| 3 | bDGlcpA | 4.65 | 3.71 | 3.71 | 3.90 | 4.94 |
|
| 2 | Ac |
| 2.11 | |
| 4 | %Subst | 3.77 | |
| | bDGlcpN | 4.62 | 3.97 | 4.24 | 4.26 | 3.61 | 3.74 3.93 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3,2 | %aLSorf | 61.5 | 104.3 | 79.2 | 76.1 | 79.2 | 62.9 |
| 3,6 | x?GroN | 61.5 | 53.9 | 61.5 | |
| 3 | bDGlcpA | 101.0 | 73.8 | 73.8 | 79.0 | 75.1 | 170.7 |
| 2 | Ac | 175.0 | 23.5 | |
| 4 | %Subst | 54.8 | |
| | bDGlcpN | 100.7 | 56.1 | 75.8 | 74.2 | 75.5 | 61.3 |
|
There is only one chemically distinct structure: