Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Associated disease: infection due to Proteus mirabilis [ICD11:
XN9ZF 
];
infection due to Escherichia coli [ICD11:
XN6P4 
]
The structure was elucidated in this paperNCBI PubMed ID: 18625011Publication DOI: 10.1111/j.1574-695X.2008.00440.xJournal NLM ID: 9315554Publisher: Elsevier
Correspondence: arabski

pu.kielce.pl
Institutions: Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia, Department of Microbiology, Institute of Biology, Świętokrzyska Academy, ul. Świę tokrzyska 15,25-406, Kielce, Poland, Department of General Microbiology, Institute of Microbiology and Immunology, University of Łódź, Banacha, Łódź, Poland
The O-specific polysaccharide (OPS) isolated from the lipopolysaccharide of Proteus mirabilis O36 was found to have a pentasaccharide repeating unit of the following structure: →2)-β-D-Ribf-(1→4)-β-D-Galp-(1→4)-α-D-GlcpNAc6Ac-(1→4)-β-D-Galp-(1→3)-α-D-GlcpNAc-(1→. The structure is unique among Proteus OPS, which is in agreement with the classification of this strain into a separate Proteus O-serogroup. Remarkably, the P. mirabilis O36-polysaccharide has the same structure as the OPS of Escherichia coli O153, except that the latter is devoid of O-acetyl groups. The cross-reaction of anti-O36 antibodies with the O-part of E. coli O153 lipopolysaccharide is observed. In the present study, two steps of serotyping Proteus strains are proposed: screening of dry mass with enzyme-linked immunosorbent assay and immunoblot with the crude lipopolysaccharides. This method allowed serotyping of 99 P. mirabilis strains infecting the human urinary tract. Three strains were classified into serogroup O36. The migration pattern of these lipopolysaccharides fraction with long O-specific PSs was similar to the standard laboratory P. mirabilis O36 (Prk 62/57) lipopolysaccharide. The relatively low number of clinical strains belonging to serogroup O36 did not correspond to the presence of anti-P. mirabilis O36 antibodies in the blood donors' sera. Twenty-five percent of tested sera contained a statistically significant elevated level of antibodies reacting with thermostable surface antigens of P. mirabilis O36. The presence and amount of antibodies correlated with Thr399Ile TLR4 polymorphism types (P=0.044).
Escherichia coli, O-specific polysaccharide, Proteus mirabilis, serological classification, bacterial polysaccharide structure, TLR4
Structure type: suggested polymer biological repeating unit
Location inside paper: p.399, Table 1, Table 2, p. 402, structure (A)
Compound class: O-polysaccharide, O-antigen
Contained glycoepitopes: IEDB_136044,IEDB_137340,IEDB_137472,IEDB_140108,IEDB_141794,IEDB_141807,IEDB_142078,IEDB_149136,IEDB_150899,IEDB_151531,IEDB_190606,SB_137,SB_165,SB_166,SB_187,SB_195,SB_29,SB_30,SB_7,SB_88
Methods: 13C NMR, 1H NMR, NMR-2D, chemical analysis, GLC, serological methods, genetic methods
Biological activity: serological data
Comments, role: NMR data for O-deacetylated polysaccharide Proteus mirabilis O36
Related record ID(s): 20706, 22605, 22811, 22812, 22814, 22815, 22816, 22817, 22818, 30378, 118255
NCBI Taxonomy refs (TaxIDs): 584,
2170723Reference(s) to other database(s): GTC:G94401IO, GlycomeDB:
28137
Show glycosyltransferases
NMR conditions: in D2O at 303 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3,4,4,4 bDRibf 108.2 80.3 71.4 84.1 64.0
3,4,4 bDGalp 104.7 72.4 74.2 77.3 76.0 62.6
3,4,2 Ac 175.6-175.9 23.3-23.4
3,4 aDGlcpN 99.2 54.9 70.5 79.8 72.1 60.8
3 bDGalp 105.0 71.9 73.4 77.9 77.3 61.7
2 Ac 175.6-175.9 23.3-23.4
aDGlcpN 97.2 53.9 81.5 70.0 73.4 61.9
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
3,4,4,4 bDRibf 5.32 4.26 4.28 4.11 3.69-3.87
3,4,4 bDGalp 4.52 3.52 3.79 4.02 3.76 3.77
3,4,2 Ac - 2.05-2.06
3,4 aDGlcpN 4.85 3.95 3.95 3.77 4.30 3.82-3.92
3 bDGalp 4.53 3.58 3.73 3.98 3.75 3.72-3.74
2 Ac - 2.05-2.06
aDGlcpN 5.10 4.19 4.05 3.65 3.94 3.84-3.88
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
3,4,4,4 bDRibf 108.2/5.32 80.3/4.26 71.4/4.28 84.1/4.11 64.0/3.69-3.87
3,4,4 bDGalp 104.7/4.52 72.4/3.52 74.2/3.79 77.3/4.02 76.0/3.76 62.6/3.77
3,4,2 Ac 23.3-23.4/2.05-2.06
3,4 aDGlcpN 99.2/4.85 54.9/3.95 70.5/3.95 79.8/3.77 72.1/4.30 60.8/3.82-3.92
3 bDGalp 105.0/4.53 71.9/3.58 73.4/3.73 77.9/3.98 77.3/3.75 61.7/3.72-3.74
2 Ac 23.3-23.4/2.05-2.06
aDGlcpN 97.2/5.10 53.9/4.19 81.5/4.05 70.0/3.65 73.4/3.94 61.9/3.84-3.88
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 3,4,4,4 | bDRibf | 5.32 | 4.26 | 4.28 | 4.11 | 3.69 3.87 | |
| 3,4,4 | bDGalp | 4.52 | 3.52 | 3.79 | 4.02 | 3.76 | 3.77 |
| 3,4,2 | Ac |
| 2.05 2.06 | |
| 3,4 | aDGlcpN | 4.85 | 3.95 | 3.95 | 3.77 | 4.30 | 3.82 3.92 |
| 3 | bDGalp | 4.53 | 3.58 | 3.73 | 3.98 | 3.75 | 3.72 3.74 |
| 2 | Ac |
| 2.05 2.06 | |
| | aDGlcpN | 5.10 | 4.19 | 4.05 | 3.65 | 3.94 | 3.84 3.88 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3,4,4,4 | bDRibf | 108.2 | 80.3 | 71.4 | 84.1 | 64.0 | |
| 3,4,4 | bDGalp | 104.7 | 72.4 | 74.2 | 77.3 | 76.0 | 62.6 |
| 3,4,2 | Ac | 175.6 175.9 | 23.3 23.4 | |
| 3,4 | aDGlcpN | 99.2 | 54.9 | 70.5 | 79.8 | 72.1 | 60.8 |
| 3 | bDGalp | 105.0 | 71.9 | 73.4 | 77.9 | 77.3 | 61.7 |
| 2 | Ac | 175.6 175.9 | 23.3 23.4 | |
| | aDGlcpN | 97.2 | 53.9 | 81.5 | 70.0 | 73.4 | 61.9 |
|
There is only one chemically distinct structure: