Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Host organism: Homo sapiens
Associated disease: cystic fibrosis (CF) [ICD11:
CA25 
]
The structure was elucidated in this paperNCBI PubMed ID: 19589504Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: molinaro

unita.it
Institutions: Dipartimento di Chimica Organica e Biochimica, Universita degli Studi di Napoli Federico II, Via Cintia, 4 I-80126 Napoli, Italy
The pathogenic mechanisms of Gram-negative infection in cystic fibrosis are only just beginning to be explored at the molecular level. Several virulence factors have been defined, one of the most important is the lipopolysaccharide molecule. In order to fully understand the mechanisms of bacterial infection and host recognition a full structure/activity study of lipopolysaccharide is needed. In the present paper, we define the complete structure of the O-specific polysaccharide from the lipopolysaccharide from Burkholderia anthina, an uncommon pathogen of cystic fibrosis patients
Lipopolysaccharide, structure, Bacterial, host, virulence, polysaccharide, Burkholderia, molecular, molecule, recognition, factor, infection, level, O-specific, O-specific polysaccharide, mechanism, defined, Gram-negative, pathogen, cystic fibrosis, virulence factor, PDF, order, pathogenic, virulence factors, Fibrosis, Paper
Structure type: polymer chemical repeating unit
Location inside paper: p.1699
Compound class: O-polysaccharide, O-antigen
Contained glycoepitopes: IEDB_130669,IEDB_133754,IEDB_136105,IEDB_136906,IEDB_137472,IEDB_141794,IEDB_151528,IEDB_190606,IEDB_225177,IEDB_885823,SB_7
Methods: 13C NMR, 1H NMR, methylation, NMR-2D, GC-MS, GLC, composition analysis
NCBI Taxonomy refs (TaxIDs): 179879Reference(s) to other database(s): GTC:G61497FY, GlycomeDB:
37265
Show glycosyltransferases
NMR conditions: in D2O at 300 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
2,2 aLRhap 102.4 66.6 74.6 70.4 69.3 17.1
2 aLRhap 100.7 78.3 70.1 72.0 69.4 17.1
aDGalp 94.6 74.3 69.3 69.6 71.0 60.9
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
2,2 aLRhap 4.87 4.15 3.75 3.47 3.64 1.18
2 aLRhap 5.09 3.95 3.76 3.37 3.63 1.18
aDGalp 5.05 3.81 3.97 3.90 4.08 3.61
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
2,2 aLRhap 102.4/4.87 66.6/4.15 74.6/3.75 70.4/3.47 69.3/3.64 17.1/1.18
2 aLRhap 100.7/5.09 78.3/3.95 70.1/3.76 72.0/3.37 69.4/3.63 17.1/1.18
aDGalp 94.6/5.05 74.3/3.81 69.3/3.97 69.6/3.90 71.0/4.08 60.9/3.61
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 2,2 | aLRhap | 4.87 | 4.15 | 3.75 | 3.47 | 3.64 | 1.18 |
| 2 | aLRhap | 5.09 | 3.95 | 3.76 | 3.37 | 3.63 | 1.18 |
| | aDGalp | 5.05 | 3.81 | 3.97 | 3.90 | 4.08 | 3.61 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 2,2 | aLRhap | 102.4 | 66.6 | 74.6 | 70.4 | 69.3 | 17.1 |
| 2 | aLRhap | 100.7 | 78.3 | 70.1 | 72.0 | 69.4 | 17.1 |
| | aDGalp | 94.6 | 74.3 | 69.3 | 69.6 | 71.0 | 60.9 |
|
There is only one chemically distinct structure: