Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Host organism: (Actinopterygii); Homo sapiens
Associated disease: hemorrhagic septicemia [ICD11:
MA15.Y 
];
infectious gastroenteritis [ICD11:
1A40.Z ];
gas gangrene [ICD11:
1C16 , ICD11:
XN7J5 ];
meningitis [ICD11:
1D01 ];
osteomyelitis [ICD11:
FB84 ];
cholecystitis [ICD11:
DC12 ]
NCBI PubMed ID: 20589944Publication DOI: 10.1002/mas.20258Journal NLM ID: 8219702Publisher: Wiley
Correspondence: joe.banoub
dfo-mpo.gc.ca
Institutions: Fisheries and Oceans Canada, Science Branch, Special Projects, P.O. Box 5667, St. John's, Newfoundland, Canada A1C 5X1, Department of Chemistry, Memorial University of Newfoundland, St. John's, Newfoundland, Canada A1B 3V6, College of Pharmacy and Nutrition, University of Saskatchewan, Thorvaldson Building, 110 Science Place, Saskatoon, Saskatchewan, Canada S7N 5C9, Unité de Catalyse et de Chimie du Solide, Site de l'Artois—UMR CNRS 8181, I.U.T. de Béthune, Département Chimie, 1230 rue de l'Université, BP819, 62408 Béthune Cedex, France, Institute for Marine Biosciences Room 219A, (NRC-IMB), National Research Council of Canada, Government of Canada, 1411 Oxford Street, Halifax, NS, Canada B3H 3Z1
Mass spectrometric studies are now playing a leading role in the elucidation of lipopolysaccharide (LPS) structures through the characterization of antigenic polysaccharides, core oligosaccharides and lipid A components including LPS genetic modifications. The conventional MS and MS/MS analyses together with CID fragmentation provide additional structural information complementary to the previous analytical experiments, and thus contribute to an integrated strategy for the simultaneous characterization and correct sequencing of the carbohydrate moiety.
LPS, O-antigen, lipid A, core oligosaccharide, MS and MS/MS analyses
Structure type: polymer chemical repeating unit
Location inside paper: p.608, table 1
Compound class: O-polysaccharide
Contained glycoepitopes: IEDB_130648,IEDB_135813,IEDB_135849,IEDB_136105,IEDB_136906,IEDB_137340,IEDB_137472,IEDB_137473,IEDB_141794,IEDB_141807,IEDB_151528,IEDB_151531,IEDB_190606,IEDB_225177,IEDB_885823,SB_21,SB_7
Methods: MS/MS, MS
Comments, role: review
Related record ID(s): 10180
NCBI Taxonomy refs (TaxIDs): 636Reference(s) to other database(s): GlycomeDB:
33690
Show glycosyltransferases
There is only one chemically distinct structure:
Taxonomic group: bacteria / Firmicutes
(Phylum: Firmicutes)
Associated disease: gas gangrene [ICD11:
1C16 , ICD11:
XN7J5 ];
septicemia [ICD11:
MA15.Y ];
infection due to Clostridium perfringens [ICD11:
XN7J5 ]
NCBI PubMed ID: 17009947Publication DOI: 10.1134/S000629790609001XJournal NLM ID: 0376536Publisher: Nauka/Interperiodica
Correspondence: ovoys
physiol.komisc.ru
Institutions: Institute of Physiology, Komi Science Center, Urals Branch of the Russian Academy of Sciences, Syktyvkar 167982, Russia
Structural patterns of bacterial capsular antigens including capsular polysaccharides and exoglycans are given in this review. In addition, the immunological activity of capsular antigens and their role in type specificity of bacteria are discussed.
structure, capsular polysaccharides, bacterial capsular antigens, bacterial exoglycans, immunological activity, type specificity
Structure type: polymer chemical repeating unit
Location inside paper: p.949
Compound class: CPS
Contained glycoepitopes: IEDB_130648,IEDB_131187,IEDB_135813,IEDB_136906,IEDB_137340,IEDB_137472,IEDB_137473,IEDB_137485,IEDB_141794,IEDB_141807,IEDB_142488,IEDB_144983,IEDB_146664,IEDB_151528,IEDB_151531,IEDB_152206,IEDB_190606,IEDB_983930,IEDB_983931,SB_192,SB_44,SB_7,SB_72
Comments, role: review
NCBI Taxonomy refs (TaxIDs): 1502Reference(s) to other database(s): GTC:G89391ZK
Show glycosyltransferases
There is only one chemically distinct structure:
Found 
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