Taxonomic group: bacteria / Firmicutes
(Phylum: Firmicutes)
Associated disease: infection due to Bacillus [ICD11:
XN9ZE 
]
The structure was elucidated in this paperNCBI PubMed ID: 21292244Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: Maria.Matulova

savba.sk
Institutions: Institute of Chemistry, Center for Glycomics, Slovak Academy of Sciences, Dubravska cesta 9, Bratislava, Slovakia
Bacillus sp. 3B6, bacterium isolated from cloud water, was incubated on sucrose for exopolysaccharide production. Dialysis of the obtained mixture (MWCO 500) afforded dialyzate (DIM) and retentate (RIM). Both were separated by size exclusion chromatography. RIM afforded eight fractions: levan exopolysaccharide (EPS), fructooligosaccharides (FOSs) of levan and inulin types with different degrees of polymerization (dp 2-7) and monosaccharides fructose:glucose=9:1. Levan was composed of two components with molecular mass ~3500 and ~100kDa in the ratio 2.3:1. Disaccharide fraction contained difructose anhydride DFA IV. 1-Kestose, 6-kestose, and neokestose were identified as trisaccharides in the ratio 2:1:3. Fractions with dp 4-7 were mixtures of FOSs of levan (2,6-βFruf) and inulin (1,2-βFruf) type. DIM separation afforded two dominant fractions: monosaccharides with fructose: glucose ratio 1:3; disaccharide fraction contained sucrose only. DIM trisaccharide fraction contained 1-kestose, 6-kestose, and neokestose in the ratio1.5:1:2, penta and hexasaccharide fractions contained FOSs of levan type (2,6-βFruf) containing α-glucose. In the pentasaccharide fraction also the presence of a homopentasaccharide composed of 2,6-linked βFruf units only was identified. Nystose, inulin (1,2-βFruf) type, was identified as DIM tetrasaccharide. Identification of levan 2,6-βFruf and inulin 1,2-βFruf type oligosaccharides in the incubation medium suggests both levansucrase and inulosucrase enzymes activity in Bacillus sp. 3B6.
Bacillus, inulin, levan, cloud water, FOSs, DFA IV
Structure type: homopolymer
Location inside paper: p.504, table 1
Trivial name: levan, levan-type polysaccharide
Compound class: EPS, polysaccharide, fructan
Contained glycoepitopes: IEDB_923066
Methods: 13C NMR, 1H NMR, TLC, ESI-MS, NMR-1D, dialysis
NCBI Taxonomy refs (TaxIDs): 1386Reference(s) to other database(s): GTC:G29465PK, GlycomeDB:
9593
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
bDFruf 60.75 105.00 77.15 76.00 81.07 64.20
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
bDFruf 3.670-3.77 - 4.178 4.096 3.958 3.549-3.898
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
bDFruf 60.75/3.670-3.77 77.15/4.178 76.00/4.096 81.07/3.958 64.20/3.549-3.898
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| | bDFruf | 3.670 3.77 |
| 4.178 | 4.096 | 3.958 | 3.549 3.898 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| | bDFruf | 60.75 | 105.00 | 77.15 | 76.00 | 81.07 | 64.20 |
|
There is only one chemically distinct structure: