Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Host organism: Homo sapiens
Associated disease: gastroenteritis [ICD11:
1A40.0 
];
wound infections [ICD11:
NF0A.3 
];
septicemia [ICD11:
MA15.Y 
]
The structure was elucidated in this paperNCBI PubMed ID: 21920513Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: M.M. Corsaro <corsaro

unina.it>
Institutions: Dipartimento di Chimica Organica e Biochimica, Universita di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cinthia 4, 80126 Napoli, Italy
Bacteria belonging to the genus Aeromonas are Gram-negative mesophilic and essentially ubiquitous in the microbial biosphere; moreover they are considered very important pathogens in fish and responsible for a great variety of human infections. The virulence of Gram-negative bacteria is often associated with the structure of lipopolysaccharides, which consist of three regions covalently linked: the glycolipid (lipid A), the oligosaccharide region (core region) and the O-specific polysaccharide (O-chain, O-antigen). The O-chain region seems to play an important role in host-pathogen interaction. In the case of Aeromonas hydrophila the majority of pathogenic strains belongs to serogroups O:11, O:16, O:18 and O:34. In this paper, we report the complete structure of the O-chain of A. hydrophila strain A19 (serogroup O:14), a pathogenic strain isolated from European eels, which showed high virulence when tested in trout or mice. Dried cells were extracted by the PCP (phenol/chloroform/petroleum ether) method obtaining the lipopolysaccharide. After mild acid hydrolysis the lipid A was removed by centrifugation and the obtained polysaccharide was fully characterized by means of chemical analysis and one- and two-dimensional NMR spectroscopy. All the data collected are directed towards the following structure: (formula: see text).
Lipopolysaccharide, NMR spectroscopy, structure elucidation, Aeromonas
Structure type: polymer chemical repeating unit
Location inside paper: abstract, p.2521
Compound class: O-polysaccharide, O-antigen
Contained glycoepitopes: IEDB_136105,IEDB_142488,IEDB_144998,IEDB_146664,IEDB_158539,IEDB_225177,IEDB_232584,IEDB_885823,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, methylation, NMR-2D, sugar analysis, GLC, mild acid hydrolysis, DOC-PAGE, NMR-1D
NCBI Taxonomy refs (TaxIDs): 644Reference(s) to other database(s): GTC:G54049LH
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
4 aLRhap 101.7 68.0 76.6 71.4 70.2 17.8
2 aDGlcp 97.8 72.4 74.0 70.6 73.1 61.6
aDGlcp 93.6 77.1 71.2 78.3 71.8 60.9
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
4 aLRhap 4.94 4.20 3.82 3.58 4.08 1.28
2 aDGlcp 5.12 3.59 3.78 3.46 3.96 3.80-3.85
aDGlcp 5.28 3.72 3.98 3.67 4.08 3.72
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
4 aLRhap 101.7/4.94 68.0/4.20 76.6/3.82 71.4/3.58 70.2/4.08 17.8/1.28
2 aDGlcp 97.8/5.12 72.4/3.59 74.0/3.78 70.6/3.46 73.1/3.96 61.6/3.80-3.85
aDGlcp 93.6/5.28 77.1/3.72 71.2/3.98 78.3/3.67 71.8/4.08 60.9/3.72
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 4 | aLRhap | 4.94 | 4.20 | 3.82 | 3.58 | 4.08 | 1.28 |
| 2 | aDGlcp | 5.12 | 3.59 | 3.78 | 3.46 | 3.96 | 3.80 3.85 |
| | aDGlcp | 5.28 | 3.72 | 3.98 | 3.67 | 4.08 | 3.72 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 4 | aLRhap | 101.7 | 68.0 | 76.6 | 71.4 | 70.2 | 17.8 |
| 2 | aDGlcp | 97.8 | 72.4 | 74.0 | 70.6 | 73.1 | 61.6 |
| | aDGlcp | 93.6 | 77.1 | 71.2 | 78.3 | 71.8 | 60.9 |
|
There is only one chemically distinct structure: