Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Host organism: Sus scrofa
Associated disease: polyserositis [ICD11:
4A60.0 
]
The structure was elucidated in this paperNCBI PubMed ID: 23664728Publication DOI: 10.1016/j.carres.2013.04.023Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: E. Vinogradov <Evguenii.Vinogradov

nrc-cnrc.gc.ca>
Institutions: National Research Council, Ottawa, ON, Canada, Faculté de médecine vétérinaire, Université de Montréal, St-Hyacinthe, Québec, Canada, Centre de Recerca en Sanitat Animal (CReSA), UAB-IRTA, Campus de la Universitat Autònoma de Barcelona, Bellaterra (Cerdanyola del Vallès) and Institut de Recerca i Tecnología Agroalimentàries (IRTA), Barcelona, Spain
Haemophilus parasuis is a Gram-negative bacterium from the family Pasteurellaceae and a swine pathogen. H. parasuis is found in the upper respiratory tract of piglets and produces Glasser's disease, an invasive disease characterized by polyserositis. H. parasuis contains a short lipopolysaccharide (LPS) or lipooligosaccharide (LOS) reported to play a partial role in interaction with host cells. The presence of capsule has been phenotypically demonstrated in certain H. parasuis strains and its role in virulence has been suggested, but the chemical structure of the surface polysaccharides of this bacterium was unknown. The structure of capsular polysaccharide (CPS) and LOS from virulent strains ER-6P and Nagasaki was studied by NMR spectroscopy, mass spectrometry and chemical methods. CPS from both strains had the same main chain with disaccharide repeating unit, substituted with α-Neu5R-(2-3)-α-GalNAc-(1-P-(strain ER-6P) or α-Neu5R-(2-3)-α-Gal-(1-P-strain Nagasaki) side chains, where R is the N-acetyl or N-glycolyl group. Glycolyl-neuraminic acid is widely found in animal glycoproteins, but it apparently has not been found in bacteria before, and might be important for the biology of this microorganism. Ac and Gc were present in equal amounts in the strain ER-6P but Nagasaki contained only about 20% of Gc substituent. Both strains produced the same LPS of a rough type with a single phosphorylated Kdo linking core and lipid A parts. LOS structure was similar to some strains of H. influenzae and contained a globotetraose terminal sequence.
Lipopolysaccharide, polysaccharide, capsule, Haemophilus parasuis
Structure type: polymer chemical repeating unit
Location inside paper: p.93, fig.2, 2
Compound class: CPS
Contained glycoepitopes: IEDB_136906,IEDB_137472,IEDB_141794,IEDB_142345,IEDB_142488,IEDB_145001,IEDB_146664,IEDB_151528,IEDB_190606,IEDB_241118,IEDB_983931,SB_192,SB_7
Methods: 13C NMR, 1H NMR, NMR-2D, HF solvolysis, sugar analysis, ESI-MS, mild acid hydrolysis, alkaline degradation, GC, de-O-acylation with hydrazine, NMR-1D, methanolysis, CE-MS
Comments, role: mild acid hydrolysis of the CPS
Related record ID(s): 29316, 29718, 29719, 29721, 29722, 29723, 29724
NCBI Taxonomy refs (TaxIDs): 1117322Reference(s) to other database(s): GTC:G32359SX
Show glycosyltransferases
NMR conditions: in D2O / H2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3,6,0 aDGalp 96.5 69.1 70.0 70.1 72.9 62.0
3,6 P
3 bDGlcp
2 Ac
4 Ac
bDFucpN4N
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
3,6,0 aDGalp 5.54 3.85 3.90 4.03 4.11 3.75
3,6 P
3 bDGlcp
2 Ac
4 Ac
bDFucpN4N
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
3,6,0 aDGalp 96.5/5.54 69.1/3.85 70.0/3.90 70.1/4.03 72.9/4.11 62.0/3.75
3,6 P
3 bDGlcp
2 Ac
4 Ac
bDFucpN4N
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 3,6,0 | aDGalp | 5.54 | 3.85 | 3.90 | 4.03 | 4.11 | 3.75 |
| 3,6 | P | |
| 3 | bDGlcp | |
| 2 | Ac | |
| 4 | Ac | |
| | bDFucpN4N | |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3,6,0 | aDGalp | 96.5 | 69.1 | 70.0 | 70.1 | 72.9 | 62.0 |
| 3,6 | P | |
| 3 | bDGlcp | |
| 2 | Ac | |
| 4 | Ac | |
| | bDFucpN4N | |
|
There is only one chemically distinct structure: