Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Host organism: (animal); Homo sapiens
Associated disease: infectious gastroenteritis [ICD11:
1A40.Z 
];
diarrhea [ICD11:
ME05.1 
, ICD11:
SA55 
];
urinary tract infections (UTI) [ICD11:
GC08 
];
septicemia [ICD11:
MA15.Y 
];
meningitis [ICD11:
1D01 
];
infection due to Escherichia coli [ICD11:
XN6P4 
]
The structure was elucidated in this paperNCBI PubMed ID: 19423083Publication DOI: 10.1016/j.carres.2009.03.023Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: G. Widmalm <gw

organ.su.se>
Institutions: Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, Stockholm, Sweden
The structure of the O-antigen polysaccharide (PS) from Escherichia coli O74 has been determined. Component analysis, together with (1)H and (13)C NMR spectroscopy as well as (1)H,(15)N-HSQC experiments were employed to elucidate the structure. Inter-residue correlations were determined by (1)H,(1)H-NOESY and (1)H,(13)C-heteronuclear multiple-bond correlation experiments. The PS is composed of tetrasaccharide repeating units with the following structure: Cross-peaks of low intensity from an α-linked N-acetylglucosamine residue were present in the NMR spectra, and spectral analysis indicates that they originate from the penultimate residue in the polysaccharide. Consequently, the biological repeating unit has a 3-substituted N-acetyl-d-glucosamine residue at its reducing end. The (1)H, (13)C and (15)N NMR chemical shifts of the α- and β-anomeric forms of d-Fucp3NAc are also reported. The repeating unit of the E. coli O74 O-antigen is identical to that of the capsular polysaccharide from E. coli K45.
Lipopolysaccharide, NMR, Escherichia coli, capsular polysaccharide, biological repeating unit
Structure type: monomer
Location inside paper: p.1594, table 2, experimental 1.3
Compound class: O-polysaccharide, O-antigen
Methods: 13C NMR, 1H NMR, sugar analysis, acid hydrolysis, GLC, chemical synthesis, NMR-1D, 15N NMR, acetylation
Synthetic data: chemical
Related record ID(s): 23727, 31172
NCBI Taxonomy refs (TaxIDs): 2067425Reference(s) to other database(s): GTC:G52993MC, GlycomeDB:
6463
Show glycosyltransferases
NMR conditions: in D2O at 338 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3 Ac 175.22 22.90
aDFucp3N 92.67 66.99 51.81 71.29 67.12 16.25
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
3 Ac - 2.06
aDFucp3N 5.21 3.82 4.16 3.75 4.25 1.18
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
3 Ac 22.90/2.06
aDFucp3N 92.67/5.21 66.99/3.82 51.81/4.16 71.29/3.75 67.12/4.25 16.25/1.18
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 3 | Ac |
| 2.06 | |
| | aDFucp3N | 5.21 | 3.82 | 4.16 | 3.75 | 4.25 | 1.18 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3 | Ac | 175.22 | 22.90 | |
| | aDFucp3N | 92.67 | 66.99 | 51.81 | 71.29 | 67.12 | 16.25 |
|
There is only one chemically distinct structure: