CSDB: Search results

Taxonomic group: bacteria / Proteobacteria (Phylum: Proteobacteria)
Associated disease: infection due to Escherichia coli [ICD11: XN6P4

]

The structure was elucidated in this paper
NCBI PubMed ID: 10614068
Publication DOI: 10.1016/S0008-6215(99)00187-1
Journal NLM ID: 0043535
Publisher: Elsevier
Institutions: School of Pharmaceutical Sciences, Rhodes University, PO Box 94, Grahamstown 6140, South Africa

The primary structure of the O-antigen of Escherichia coli O116:K+:H10 was shown by monosaccharide analysis, a partial hydrolysis study and by 1D and 2D 1H and 13C NMR spectroscopy to be composed of linear pentasaccharide repeating units with the structure: →6)-a-D-GlcpNAc-(1→4)-a-D-GalpNAc-(1→4)-a-D-GalpA-(1→3)-b-D-GlcpNAc-(1→2)-b-D-Quip4NAc-(1→.

Lipopolysaccharide, structure, O-antigen, Escherichia coli, NMR spectroscopy, O116 antigen

Structure type: oligomer
Location inside paper: p.252
Compound class: O-polysaccharide
Contained glycoepitopes: IEDB_130648,IEDB_135813,IEDB_137340,IEDB_137473,IEDB_141807,IEDB_151531

Methods: NMR-2D, partial acid hydrolysis, NMR, sugar analysis

Related record ID(s): 3144
NCBI Taxonomy refs (TaxIDs): 2234129
Reference(s) to other database(s): GTC:G20907RR, GlycomeDB:25936
Show glycosyltransferases

There are 3 chemically distinct structures. Please, select:

CC(=O)N[C@H]1[C@H](O[C@@H]2[C@H](O)[C@@H](O)[C@@H](O[C@H]3[C@H](O)[C@@H](CO)OC(O)[C@@H]3NC(C)=O)O[C@@H]2C(=O)O)O[C@H](CO)[C@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2NC(C)=O)[C@@H]1O

SVG MW SMILES 3D mol Ionize