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1. (CSDB ID: 3815) | report error |
| P-4)-+ P-4)-+ a-Kdop-(2-4)-+ P-4)-+ | | | | a-D-Glcp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2-6)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | Show graphically |
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Escherichia coli J5
(Ancestor NCBI TaxID 562,
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fz-borstel.deSeptic shock due to infections with Gram-negative bacteria is a severe disease with a high mortality rate. We report the identification of the antigenic determinants of an epitope that is present in enterobacterial lipopolysaccharide (LPS) and recognized by a cross-reactive monoclonal antibody (mAb WN1 222-5) regarded as a potential means of treatment. Using whole LPS and a panel of neoglycoconjugates containing purified LPS oligosaccharides obtained from Escherichia coli core types R1, R2, R3, and R4, Salmonella enterica, and the mutant strain E. coli J-5, we showed that mAb WN1 222-5 binds to the distal part of the inner core region and recognizes the structural element R1-α-D-Glcp-(1→3)-[L-α-D-Hepp-(1→7)]-L-α-D-Hepp 4P-(1→3)-R2 (where R1 represents additional sugars of the outer core and R2 represents additional sugars of the inner core), which is common to LPS from all E. coli, Salmonella, and Shigella. WN1 222-5 binds poorly to molecules that lack the side chain heptose or lack phosphate at the branched heptose. Also molecules that are substituted with GlcpN at the side chain heptose are poorly bound. Thus, the side chain heptose and the 4-phosphate on the branched heptose are main determinants of the epitope. We have determined the binding kinetics and affinities (KD values) of the monovalent interaction of E. coli core oligosaccharides with WN1 222-5 by surface plasmon resonance and isothermal titration microcalorimetry. Affinity constants (KD values) determined by SPR were in the range of 3.6 x 10-5 to 3.2 x 10-8 m, with the highest affinity being observed for the core oligosaccharide from E. coli F576 (R2 core type) and the lowest KD values for those from E. coli J-5. Affinities of E. coli R1, R3, and R4 oligosaccharides were 5-10-fold lower, and values from the E. coli J-5 mutant were 29-fold lower than the R2 core oligosaccharide. Thus, the outer core sugars had a positive effect on binding
Lipopolysaccharide, lipopolysaccharides, LPS, oligosaccharide, branched, common, core, heptose, chemistry, disease, metabolism, potential, strain, structural, Support, Non-U.S.Gov't, antigenic determinant, chain, molecule, Research, side chain, Escherichia, Escherichia coli, antibodies, antibody, epitope, monoclonal, monoclonal antibodies, monoclonal antibody, phosphate, Oligosaccharides, type, Carbohydrate Sequence, core oligosaccharide, high, infection, Molecular Sequence Data, epitopes, MAb, bacteria, mutant, Salmonella, enterobacterial, sugar, identification, core region, region, inner core, Magnetic Resonance Spectroscopy, medicine, resonance, Salmonella enterica, surface, enterobacteria, Shigella, interaction, Gram-negative bacteria, gram negative bacteria, Gram-negative, mutation, treatment, purified, sugars, antigenic, determinant, binding, bound, effect, Enterobacteriaceae, cross-reactive, heptoses, enzyme-linked immunosorbent assay, constant, neoglycoconjugate, affinity, calorimetry, cross-protective, Dose-Response Relationship, Immunologic, kinetics, mortality, plasmon, Protein Binding, septic, septic shock, shock, Surface Plasmon Resonance, Time Factors, titration
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