Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Associated disease: infection due to Burkholderia pseudomallei [ICD11:
XN3LD 
];
infection due to Pseudomonas pseudomallei [ICD11:
XN8AA 
]
The structure was elucidated in this paperNCBI PubMed ID: 7543882Journal NLM ID: 0246127Publisher: American Society for Microbiology
Institutions: Institute for Biological Sciences, National Research Council, Ottawa, Ontario, Canada K1A OR6,1, Department of Microbiology and Infectious Diseases, Health Science Centre, Calgary, Alberta, Canada T2N 4N12
A serologically typical strain of Burkholderia pseudomallei (strain 304b) was found to produce two S-type lipopolysaccharides (LPS) differing in the chemical structures of their O-polysaccharide (O-PS) components. Structural analysis revealed that one O-antigenic polysaccharide (O-PS I) is an unbranched high-molecularweight polymer of 1,3-linked 2-O-acetyl-6-deoxy-β-D-manno-heptopyranose residues. The other LPS O antigen (O-PS II) is an unbranched polymer of repeating disaccharide units having the structure →3)-β-D-glucopyranose-(1→3)-6-deoxy-α-L-talopyranose-(1→ in which ca. 33% of the L6dTalp residues bear 2-O-methyl and 4-O-acetyl substituents while the other L6dTalp residues carry only 2-O-acetyl substituents. Analysis of a serologically atypical strain of B. pseudomallei (strain 824a) produced a single LPS O-PS which was chemically identical to the 6-deoxy-D-manno-heptan O-PS I. The production of two distinct LPS raises the interesting question of their relative immunogenicities and consequently their relative importance for diagnostic serology and for the possible development of conjugate vaccines.
Lipopolysaccharide, antigen, LPS, structural, characterization, Burkholderia, O-antigen, O antigen, Pseudomonas, antigens, Burkholderia pseudomallei, O antigens, O-antigens, Pseudomonas pseudomallei
Structure type: polymer chemical repeating unit
Location inside paper: abstract, O-PS II
Compound class: O-polysaccharide
Contained glycoepitopes: IEDB_142488,IEDB_146664,IEDB_983931,SB_192
Methods: NMR-2D, NMR
Biological activity: sereological data
Comments, role: 33% of the L-6dTalp residues bear 2-O-methyl and 4-O-acetyl substituents while the other L-6dTalp residues carry only 2-O-acetyl substituents
Related record ID(s): 4040
NCBI Taxonomy refs (TaxIDs): 28450
Show glycosyltransferases
NMR conditions: in D2O at 318 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
3 bDGlcp 102.4 74.8 82.7 68.7 76.6 61.5
4 33%Ac
aL6dTalp 98.6 78.8 72.5 70.5 66.7 16.0
2 33%Me
2 Ac
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
3 bDGlcp 4.62 3.47 3.62 3.49 3.45 3.75-3.86
4 33%Ac
aL6dTalp 5.42 3.74 4.36 5.34 4.46 1.11
2 33%Me
2 Ac
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
3 bDGlcp 102.4/4.62 74.8/3.47 82.7/3.62 68.7/3.49 76.6/3.45 61.5/3.75-3.86
4 33%Ac
aL6dTalp 98.6/5.42 78.8/3.74 72.5/4.36 70.5/5.34 66.7/4.46 16.0/1.11
2 33%Me
2 Ac
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 3 | bDGlcp | 4.62 | 3.47 | 3.62 | 3.49 | 3.45 | 3.75 3.86 |
| 4 | 33%Ac | |
| | aL6dTalp | 5.42 | 3.74 | 4.36 | 5.34 | 4.46 | 1.11 |
| 2 | 33%Me | |
| 2 | Ac | |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 3 | bDGlcp | 102.4 | 74.8 | 82.7 | 68.7 | 76.6 | 61.5 |
| 4 | 33%Ac | |
| | aL6dTalp | 98.6 | 78.8 | 72.5 | 70.5 | 66.7 | 16.0 |
| 2 | 33%Me | |
| 2 | Ac | |
|
There is only one chemically distinct structure: