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Leal JA, Prieto A, Bernabé M, Hawksworth DL
An assessment of fungal wall heteromannans as a phylogenetically informative character in ascomycetes
FEMS Microbiology Reviews 34(6) (2010)
986-1014
Aphanoascus
(NCBI TaxID 64966,
species name lookup)
Arachnotheca
(NCBI TaxID 180786,
species name lookup)
Chrysosporium
(NCBI TaxID 40411,
species name lookup)
Ascocalvatia
(NCBI TaxID 78601,
species name lookup)
Onygena
(NCBI TaxID 45432,
species name lookup)
Paracoccidioides
(NCBI TaxID 38946,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Associated disease: infection due to Chrysosporium [ICD11:
XN106 
];
infection due to Paracoccidioides [ICD11:
XN7RH ]
NCBI PubMed ID: 20491931Publication DOI: 10.1111/j.1574-6976.2010.00225.xJournal NLM ID: 8902526Publisher: Oxford University Press
Correspondence: aliprieto
cib.csic.es
Institutions: Departamento de Biología Ambiental, Centro de Investigaciones Biológicas, CSIC, Madrid, Spain, Departamento de Síntesis, Estructura y Propiedades de Compuestos Orgánicos, Instituto de Química Orgánica, CSIC, Madrid, Spain, Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain, Department of Botany, Natural History Museum, London, UK
The fungal wall contains a small proportion of alkali-extractable water-soluble heteromannans (F1SS). They are the glycidic moiety of glycoproteins that have important roles in the biology of fungi. A considerable number of these polysaccharides has been described, differing in composition or linkage types. Their structure is similar in all species of a well-delimited genus, and teleomorphs and their corresponding anamorphs. Therefore, these polysaccharides have been used as chemotaxonomic markers at the genus level. Here we review cases where they have been found to resolve relationships around the genus level, and assess their phylogenetic informativeness in the delineation of taxa at family and higher ranks in the ascomycetes by comparison with molecular trees. Generally, the correlation is extremely good, from the species to the class level, though there are some divergences. In particular, comparisons suggest that the concept of the Sordariomycetes may eventually require revision as more molecular data become available. An analysis of the different chemical structures of these polysaccharides can lead to the proposal and testing of phylogenetic hypotheses, in a parallel manner to those generated from molecular trees. These molecules serve as an independent character similar to morphological or molecular characters.
phylogeny, evolution, lichens, Ascomycota, molecular systematics, F1SS, wall polysaccharides
Structure type: fragment of a bigger structure
Location inside paper: p.991, table 1, PS structure 3, part of structure 6
Trivial name: cell wall heteromannan, galactomannan Pc-4
Compound class: cell wall polysaccharide
Contained glycoepitopes: IEDB_130701,IEDB_136104,IEDB_140116,IEDB_141793,IEDB_141828,IEDB_141829,IEDB_141831,IEDB_143632,IEDB_144983,IEDB_152206,IEDB_153220,IEDB_153762,IEDB_153763,IEDB_76933,IEDB_857732,IEDB_857735,IEDB_983930,SB_136,SB_191,SB_196,SB_198,SB_44,SB_67,SB_72
Comments, role: review; one of repeat units; for Ascocalvatia, Aphanoascus, Onygena, Chrysosporium, and Paracoccidioides, this structure is the rightmost polymeric part of the PS structure, see ID 41861,41862.
Related record ID(s): 41707, 41861, 41862
NCBI Taxonomy refs (TaxIDs): 64966,
180786,
40411,
78601,
45432,
38946Reference(s) to other database(s): GTC:G75213RY
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There is only one chemically distinct structure:
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Leal JA, Prieto A, Bernabé M, Hawksworth DL
An assessment of fungal wall heteromannans as a phylogenetically informative character in ascomycetes
FEMS Microbiology Reviews 34(6) (2010)
986-1014
Ascocalvatia
(NCBI TaxID 78601,
species name lookup)
Aphanoascus
(NCBI TaxID 64966,
species name lookup)
Onygena
(NCBI TaxID 45432,
species name lookup)
Chrysosporium
(NCBI TaxID 40411,
species name lookup)
Paracoccidioides
(NCBI TaxID 38946,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Associated disease: infection due to Chrysosporium [ICD11:
XN106 ];
infection due to Paracoccidioides [ICD11:
XN7RH ]
NCBI PubMed ID: 20491931Publication DOI: 10.1111/j.1574-6976.2010.00225.xJournal NLM ID: 8902526Publisher: Oxford University Press
Correspondence: aliprieto
cib.csic.es
Institutions: Departamento de Biología Ambiental, Centro de Investigaciones Biológicas, CSIC, Madrid, Spain, Departamento de Síntesis, Estructura y Propiedades de Compuestos Orgánicos, Instituto de Química Orgánica, CSIC, Madrid, Spain, Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain, Department of Botany, Natural History Museum, London, UK
The fungal wall contains a small proportion of alkali-extractable water-soluble heteromannans (F1SS). They are the glycidic moiety of glycoproteins that have important roles in the biology of fungi. A considerable number of these polysaccharides has been described, differing in composition or linkage types. Their structure is similar in all species of a well-delimited genus, and teleomorphs and their corresponding anamorphs. Therefore, these polysaccharides have been used as chemotaxonomic markers at the genus level. Here we review cases where they have been found to resolve relationships around the genus level, and assess their phylogenetic informativeness in the delineation of taxa at family and higher ranks in the ascomycetes by comparison with molecular trees. Generally, the correlation is extremely good, from the species to the class level, though there are some divergences. In particular, comparisons suggest that the concept of the Sordariomycetes may eventually require revision as more molecular data become available. An analysis of the different chemical structures of these polysaccharides can lead to the proposal and testing of phylogenetic hypotheses, in a parallel manner to those generated from molecular trees. These molecules serve as an independent character similar to morphological or molecular characters.
phylogeny, evolution, lichens, Ascomycota, molecular systematics, F1SS, wall polysaccharides
Structure type: fragment of a bigger structure
Location inside paper: p.991, table 1, PS structure 6
Trivial name: cell wall heteromannan
Compound class: cell wall polysaccharide
Contained glycoepitopes: IEDB_130701,IEDB_136104,IEDB_137472,IEDB_140116,IEDB_141793,IEDB_141828,IEDB_141829,IEDB_141831,IEDB_143632,IEDB_144983,IEDB_152206,IEDB_153220,IEDB_153762,IEDB_153763,IEDB_190606,IEDB_76933,IEDB_857732,IEDB_857735,IEDB_983930,SB_136,SB_191,SB_196,SB_198,SB_44,SB_67,SB_72
Comments, role: review; one of repeat units of PS structure 6, see ID 41860,41862.
Related record ID(s): 41707, 41860, 41862
NCBI Taxonomy refs (TaxIDs): 78601,
64966,
45432,
40411,
38946Reference(s) to other database(s): GTC:G97994FD
Show glycosyltransferases
There is only one chemically distinct structure:
Expand this record
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Leal JA, Prieto A, Bernabé M, Hawksworth DL
An assessment of fungal wall heteromannans as a phylogenetically informative character in ascomycetes
FEMS Microbiology Reviews 34(6) (2010)
986-1014
|
a-D-Manp-(1-2)-+
|
a-D-Galf-(1-6)-a-D-Manp-(1-2)-+ |
| |
-6)-a-D-Manp-(1-6)-a-D-Manp-(1- |
Show graphically |
Ascocalvatia
(NCBI TaxID 78601,
species name lookup)
Aphanoascus
(NCBI TaxID 64966,
species name lookup)
Onygena
(NCBI TaxID 45432,
species name lookup)
Chrysosporium
(NCBI TaxID 40411,
species name lookup)
Paracoccidioides
(NCBI TaxID 38946,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Associated disease: infection due to Chrysosporium [ICD11:
XN106 ];
infection due to Paracoccidioides [ICD11:
XN7RH ]
NCBI PubMed ID: 20491931Publication DOI: 10.1111/j.1574-6976.2010.00225.xJournal NLM ID: 8902526Publisher: Oxford University Press
Correspondence: aliprieto
cib.csic.es
Institutions: Departamento de Biología Ambiental, Centro de Investigaciones Biológicas, CSIC, Madrid, Spain, Departamento de Síntesis, Estructura y Propiedades de Compuestos Orgánicos, Instituto de Química Orgánica, CSIC, Madrid, Spain, Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain, Department of Botany, Natural History Museum, London, UK
The fungal wall contains a small proportion of alkali-extractable water-soluble heteromannans (F1SS). They are the glycidic moiety of glycoproteins that have important roles in the biology of fungi. A considerable number of these polysaccharides has been described, differing in composition or linkage types. Their structure is similar in all species of a well-delimited genus, and teleomorphs and their corresponding anamorphs. Therefore, these polysaccharides have been used as chemotaxonomic markers at the genus level. Here we review cases where they have been found to resolve relationships around the genus level, and assess their phylogenetic informativeness in the delineation of taxa at family and higher ranks in the ascomycetes by comparison with molecular trees. Generally, the correlation is extremely good, from the species to the class level, though there are some divergences. In particular, comparisons suggest that the concept of the Sordariomycetes may eventually require revision as more molecular data become available. An analysis of the different chemical structures of these polysaccharides can lead to the proposal and testing of phylogenetic hypotheses, in a parallel manner to those generated from molecular trees. These molecules serve as an independent character similar to morphological or molecular characters.
phylogeny, evolution, lichens, Ascomycota, molecular systematics, F1SS, wall polysaccharides
Structure type: structural motif or average structure
Location inside paper: p.991, table 1, PS structure 6
Trivial name: cell wall heteromannan
Compound class: cell wall polysaccharide
Contained glycoepitopes: IEDB_130701,IEDB_136104,IEDB_137472,IEDB_140116,IEDB_141793,IEDB_141828,IEDB_141829,IEDB_141831,IEDB_143632,IEDB_144983,IEDB_152206,IEDB_153220,IEDB_153762,IEDB_153763,IEDB_190606,IEDB_857732,IEDB_857735,IEDB_983930,SB_136,SB_191,SB_196,SB_198,SB_44,SB_67,SB_72
Comments, role: review; motif of polysaccharide structure 6 when p=m=1, see ID 41860,41861.
Related record ID(s): 41707, 41860, 41861
NCBI Taxonomy refs (TaxIDs): 78601,
64966,
45432,
40411,
38946Reference(s) to other database(s): GTC:G50759ZS
Show glycosyltransferases
There is only one chemically distinct structure:
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