Taxonomic group: fungi / Basidiomycota
(Phylum: Basidiomycota)
Organ / tissue: cell wallAssociated disease: infection due to Cryptococcus neoformans [ICD11:
XN3EH 
]
NCBI PubMed ID: 30742969Publication DOI: 10.1016/j.carres.2019.01.012Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: luciamp

biof.ufrj.br
Institutions: National Research Council, Ottawa, Canada, Laboratório de Glicobiologia, Instituto de Biofísica Carlos Chagas Filho, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil, Université Lille, CNRS, UMR 8576, UGSF, Unité de Glycobiologie Structurale et Fonctionnelle, Lille, France
Glucuronoxylomannogalactans (GXMGals) are characteristic capsular polysaccharides produced by the opportunistic fungus C. neoformans, which are implicated in cryptococcal virulence, via impairment of the host immune response. We determined for the first time the structure of a lipoglucuronomannogalactan (LGMGal), isolated from the surface of a mutant C. neoformans carrying a deletion in the UDP-GlcA decarboxylase gene. Monosaccharide composition and methylation analyses, as well as nuclear magnetic resonance spectroscopy were employed in discerning the structure. Our results show that the polysaccharide structure of the LGMGal differs from GXMGal by the absence of xylose and 2-O-acetylated mannose residues. LGMGal consists of a galactan main chain -[-6-α-Gal-]-, where every second Gal residue is substituted at O-3 with an oligosaccharide α-Man6OAc-3-α-Man-4-(β-GlcA-3)-β-Gal-; components in italic being non-stoichiometric. The substitution rate of β-Galp units by GlcpA is 35%. Additionally, we determined that the glycolipid anchor of the LGMGal is based on an myo-inositol phosphoceramide composed of C18-phytosphingosine and monohydroxylated lignoceric acid (2OHC24:0 fatty acid).
cell wall polysaccharide, Cryptococcus neoformans, cryptococcosis, lipoglucuronomannogalactan
Structure type: structural motif or average structure ; 30000-40000
Location inside paper: p. 7, Fig. 6, p. 5, Table 2
Compound class: polysaccharide, galactomannan
Contained glycoepitopes: IEDB_115136,IEDB_130701,IEDB_134624,IEDB_136044,IEDB_136906,IEDB_137472,IEDB_140630,IEDB_141794,IEDB_144983,IEDB_151528,IEDB_152206,IEDB_164174,IEDB_190606,IEDB_423153,IEDB_983930,SB_163,SB_165,SB_166,SB_187,SB_195,SB_197,SB_44,SB_67,SB_7,SB_72,SB_88
Methods: 13C NMR, 1H NMR, methylation, periodate oxidation, NMR-2D, GC-MS, SDS-PAGE, acid hydrolysis, GC, methanolysis, HPLC, alkaline hydrolysis, extraction, affinity chromatography, acetylation, methylation analysis, reduction, CC, cell growth, dialysis, phenol-sulfuric acid assay, derivatization, centrifugation
Comments, role: NMR temperature was 298-313 K
Related record ID(s): 50067
NCBI Taxonomy refs (TaxIDs): 40410Reference(s) to other database(s): GTC:G75984ZV
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
6 aDGalp 99.2 69.3 70.5 70.4 69.9 67.5
3,3 %bDGlcpA 105.1 74.3 76.5 72.5 76.2 ?
3,4,3,6 %Ac ? 21.5
3,4,3 aDManp 103.4 70.8 71.2 67.6 71.8 64.6
3,4 aDManp 102.7 70.5 79.5 66.7 74.2 61.5
3 bDGalp 105.5 71.8 81.3 77.2 76.3 61.5
aDGalp 99.0 68.3 81.1 70.2 69.9 67.8
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
6 aDGalp 5.01 3.87 3.93 4.06 4.25 3.72-3.96
3,3 %bDGlcpA 4.77 3.41 3.57 3.59 3.87 -
3,4,3,6 %Ac - 2.20
3,4,3 aDManp 5.17 4.14 3.95 3.79 4.04 4.37-4.44
3,4 aDManp 4.88 4.22 4.00 3.86 4.14 3.86
3 bDGalp 4.71 3.85 3.91 4.30 3.84 3.77
aDGalp 5.04 4.07 4.05 4.33 4.25 3.73-3.96
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
6 aDGalp 99.2/5.01 69.3/3.87 70.5/3.93 70.4/4.06 69.9/4.25 67.5/3.72-3.96
3,3 %bDGlcpA 105.1/4.77 74.3/3.41 76.5/3.57 72.5/3.59 76.2/3.87
3,4,3,6 %Ac 21.5/2.20
3,4,3 aDManp 103.4/5.17 70.8/4.14 71.2/3.95 67.6/3.79 71.8/4.04 64.6/4.37-4.44
3,4 aDManp 102.7/4.88 70.5/4.22 79.5/4.00 66.7/3.86 74.2/4.14 61.5/3.86
3 bDGalp 105.5/4.71 71.8/3.85 81.3/3.91 77.2/4.30 76.3/3.84 61.5/3.77
aDGalp 99.0/5.04 68.3/4.07 81.1/4.05 70.2/4.33 69.9/4.25 67.8/3.73-3.96
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| 6 | aDGalp | 5.01 | 3.87 | 3.93 | 4.06 | 4.25 | 3.72 3.96 |
| 3,3 | %bDGlcpA | 4.77 | 3.41 | 3.57 | 3.59 | 3.87 |
|
| 3,4,3,6 | %Ac |
| 2.20 | |
| 3,4,3 | aDManp | 5.17 | 4.14 | 3.95 | 3.79 | 4.04 | 4.37 4.44 |
| 3,4 | aDManp | 4.88 | 4.22 | 4.00 | 3.86 | 4.14 | 3.86 |
| 3 | bDGalp | 4.71 | 3.85 | 3.91 | 4.30 | 3.84 | 3.77 |
| | aDGalp | 5.04 | 4.07 | 4.05 | 4.33 | 4.25 | 3.73 3.96 |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 6 | aDGalp | 99.2 | 69.3 | 70.5 | 70.4 | 69.9 | 67.5 |
| 3,3 | %bDGlcpA | 105.1 | 74.3 | 76.5 | 72.5 | 76.2 | ? |
| 3,4,3,6 | %Ac | ? | 21.5 | |
| 3,4,3 | aDManp | 103.4 | 70.8 | 71.2 | 67.6 | 71.8 | 64.6 |
| 3,4 | aDManp | 102.7 | 70.5 | 79.5 | 66.7 | 74.2 | 61.5 |
| 3 | bDGalp | 105.5 | 71.8 | 81.3 | 77.2 | 76.3 | 61.5 |
| | aDGalp | 99.0 | 68.3 | 81.1 | 70.2 | 69.9 | 67.8 |
|
 The spectrum also has 2 signals at unknown positions (not plotted). |
There is only one chemically distinct structure: