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1. (Article ID: 5198)
Pallach M, Di Lorenzo F, Facchini FA, Gully D, Giraud E, Peri F, Duda KA, Molinaro A, Silipo A
Structure and inflammatory activity of the LPS isolated from Acetobacter pasteurianus CIP103108
International Journal of Biological Macromolecules 119 (2018)
1027-1035
Acetobacter pasteurianus is an acetic acid-producing Gram-negative bacterium commonly found associated with plants and plant products and widely used in the production of fermented foods, such as kefir and vinegar. Due to the acid conditions of the bacterium living habitat, uncommon structural features composing its cell envelope are expected. In the present work we have investigated the A. pasteurianus CIP103108 lipopolysaccharide (LPS) structure and immunoactivity. The structure of the lipid A and of two different O-polysaccharides was assessed. Furthermore, immunological studies with human cells showed a low immunostimulant activity of the isolated LPS, in addition to a slight capability to lower the NF-kB activation upon stimulation by toxic LPS.
Gram-negative bacteria, innate immunity, lipopolysaccharides (LPS), Acetobacter pasteurianus, MD2-TLR4
NCBI PubMed ID: 30098357Publication DOI: 10.1016/j.ijbiomac.2018.08.035Journal NLM ID: 7909578Publisher: Butterworth-Heinemann
Correspondence: silipo

unina.it
Institutions: Department of Chemical Sciences, University of Napoli Federico II, Complesso Universitario Monte Sant'Angelo, Via Cintia 4, I-80126 Napoli, Italy, IRD, Laboratoire des Symbioses Tropicales et Mediterraneennes (LSTM), UMR IRD/SupAgro/INRA/UM2/CIRAD, TA-A82/J - Campus de Baillarguet, 34398 Montpellier Cedex 5, France, Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126 Milano, Italy, Junior Group of Allergobiochemistry, Research Center Borstel, Leibniz Lung Center, 23845 Borstel, Germany, Airway Research Center North (ARCN), German Center for Lung Research, Borstel, Germany
Methods: 13C NMR, 1H NMR, methylation, gel filtration, NMR-2D, GC-MS, acid hydrolysis, GLC, mild acid hydrolysis, DOC-PAGE, MS/MS, MALDI-TOF MS, composition analysis, TLR4 activation assay
The publication contains the following compound(s):
- Compound ID: 13148
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G01182ER
- Compound ID: 13149
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a-D-Glcp-(1-4)-+
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-6)-a-D-Glcp-(1-2)-a-L-Rhap-(1-2)-a-L-Rhap-(1-2)-a-D-Manp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G73643VZ
- Compound ID: 13150
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a-Kop-(2-6)-+
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Pam-(1-3)-3HOMyr-(1-3)-+ | 3HOSte-(1-2)-+
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Pam-(1-3)-3HOSte-(1-2)-b-D-GlcpN3N-(1-6)-a-D-GlcpN-(1-1)-a-D-GlcpA
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a-D-Manp-(1-4)-+ 3HOMyr-(1-3)-+ |
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Structure type: oligomer
Compound class: lipid A
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2. (Article ID: 5722)
Ahmed HI, Ransom-Jones E, Sadiq S, Vitlic A, McLay N, Rojas MF, Ale EC, Binetti AG, Collett A, Humphreys PN, Laws AP
Structural characterisation of two medium molecular mass exopolysaccharides produced by the bacterium Lactobacillus fermentum Lf2
Carbohydrate Research 488 (2020)
107909
Under optimized conditions, the lactic acid bacterium Lactobacillus fermentum Lf2 secretes up to 2 gL-1 of a mixture of polysaccharides into the fermentation medium when grown on sucrose. Earlier studies had shown that the mixture is biologically active and work was undertaken to characterise the polysaccharides. Preparative size exclusion chromatography was used to separate a high molecular mass β-glucan (weight average mass of 1.23 × 106 gmol-1) from two medium molecular mass polysaccharides (weight average mass of 8.8 × 104 gmol-1). Under optimized growth conditions, the medium molecular mass polysaccharides accounted for more than 75% of the mixture by weight. Monomer, linkage analysis and NMR spectroscopy of the medium molecular mass polysaccharides, and material isolated after their Smith degradation, was used to identify the structure of the component polysaccharides. The mixture contains two novel polysaccharides. The first has a main chain of β-1,6-linked galactofuranoses which is non-stoichiometrically 2-O-glucosylated. The degree of substitution at the 2-position, with α-D-Glcp, depends on the fermentation conditions; under optimized conditions greater than 80% 2-O-α-D-glucosylation was observed. The second polysaccharide is a heteroglycan with four monosaccharides in the repeat unit: residual signals in the NMR suggest that the sample also contains trace amounts (<3%) of cell wall polysaccharides.
exopolysaccharide, probiotic, Lactobacillus fermentum, LAB
NCBI PubMed ID: 31968294Publication DOI: 10.1016/j.carres.2020.107909Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: A.P. Laws
hud.ac.uk>
Institutions: Department of Biological and Geographical Sciences, University of Huddersfield, Queensgate, Huddersfield, HD1 3DH, United Kingdom, Facultad de Ingenieria Quimica (UNL), Instituto de Lactologia Industrial (UNL-CONICET), Santiago del Estero 2829, 3000, Santa Fe, Argentina, Department, of Chemical Sciences, University of Huddersfield, Queensgate, Huddersfield, HD1 3DH, United Kingdom
Methods: 13C NMR, 1H NMR, NMR-2D, GC-MS, sugar analysis, Smith degradation, HPAEC-PAD, SEC-MALLS
The publication contains the following compound(s):
- Compound ID: 13148
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G01182ER
- Compound ID: 11098
Structure type: homopolymer
Trivial name: capsular galactan, β-glucan
Compound class: EPS
Reference(s) to other database(s): GTC:G51023SK
- Compound ID: 14407
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a-D-Glcp-(1-2)-+
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-3)-b-D-Glcp-(1-3)-b-D-Galf-(1-6)-b-D-Galf-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: β-glucan
Compound class: EPS
Reference(s) to other database(s): GTC:G02980YB
- Compound ID: 14408
Structure type: polymer chemical repeating unit
Trivial name: β-glucan
Compound class: EPS
Reference(s) to other database(s): GTC:G39023LQ
- Compound ID: 14409
Structure type: polymer chemical repeating unit
Trivial name: β-glucan
Compound class: EPS
Reference(s) to other database(s): GTC:G86911SH
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3. (Article ID: 6107)
Marchetti R, Nieto Fabregat F, Pallach M, Gully D, Giraud E, Molinaro A, Duda KA, Silipo A
The Peculiar Structure of Acetobacter pasteurianus CIP103108 LPS Core Oligosaccharide
Chembiochem: a European Journal of Chemical Biology 22(1) (2021)
147-150
Acetobacter pasteurianus, a member of the Alphaproteobacteria, is an acetic acid-producing bacterium present on sugar-rich substrates such as such as fruits, flowers and vegetables and traditionally used in the production of fermented food. The preferred living habitat associated with acid conditions makes the structure of the bacterial cell wall interesting to study, due to expected uncommon features. We have used a combination of chemical, analytical and NMR spectroscopy approaches to define the complete structure of the core oligosaccharide from A. pasteurianus CIP103108 LPS. Interestingly, the core oligosaccharide displays a high concentration of negatively charged groups, structural features that might contribute to reinforcing the bacterial membrane.
Lipopolysaccharide, core oligosaccharide, NMR-spectroscopy, Acetobacter pasteurianus, Acetic acid bacteria
NCBI PubMed ID: 32965769Publication DOI: 10.1002/cbic.202000597Journal NLM ID: 100937360Publisher: Weinheim, Germany: Wiley Interscience
Correspondence: silipo

unina.it
Institutions: Airway Research Center North (ARCN), German Center for Lung Research, Borstel, Germany, Department of Chemical Sciences, University of Naples Federico II Complesso Universitario Monte Sant'Angelo, Via Cintia 4, 80126, Napoli, Italy, Department of Organic Chemistry, Stockholm University, Svante Arrhenius vag 16C, 106?91, Stockholm, Sweden, IRD, Laboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) UMR IRD/SupAgro/INRA/UM2/CIRAD, TA-A82/J, Campus de Baillarguet, 34398, Montpellier Cedex 5, France, Junior Group of Allergobiochemistry, Research Center Borstel Leibniz Lung Center, Airway Research Center North (ARCN), German Center for Lung Research, Borstel, Germany
Methods: 13C NMR, 1H NMR, methylation, NMR-2D, GC-MS, 31P NMR, GLC, DOC-PAGE, composition analysis, NMR-1D, SEC
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