Taxonomic group: bacteria / Firmicutes
(Phylum: Firmicutes)
Associated disease: infection due to Streptococcus pneumoniae [ICD11:
XN3PW 
]
The structure was elucidated in this paperPublication DOI: 10.1139/v89-158Journal NLM ID: 0372705Publisher: National Research Council of Canada Canada
Institutions: Division of Biological Sciences, National Research Council, Ottawa, Ont., Canada KIA OR6
The structure of the specific capsular polysaccharide produced by Streptococcus pneumoniae type 22F (American type 22) was investigated by high-field 1H and 13C nuclear magnetic resonance spectroscopy, composition, methylation analysis, and periodate oxidation studies. The polysaccharide was found to be a high molecular weight acidic polymer composed of D-glucose, D-galactose, D-glucuronic acid, and L-rhamnose residues to form a regular repeating hexasaccharide unit having the structure [formula: see text] in which the β-L-rhamnopyranosyl residues were substituted by O-acetyl groups in 80% of the repeating units. The 1H and 13C nmr resonances of the O-deacetylated type 22F polysaccharide were completely assigned by application of two-dimensional homo- and heteronuclear chemical shift correlation techniques. Keywords: Streptococcuspneumoniae polysaccharide, NMR analysis.
NMR analysis, Streptococcus pneumoniae polysaccharide
Structure type: oligomer
Location inside paper: p. 1040, scheme 1, oligosaccharide 4, Table 2
Compound class: CPS
Contained glycoepitopes: IEDB_114707,IEDB_115136,IEDB_140630,IEDB_225177,IEDB_423153,IEDB_885823
Methods: 13C NMR, 1H NMR, methylation, GLC-MS, gel filtration, NMR-2D, sugar analysis, GLC, Smith degradation, de-O-acetylation, ion-exchange chromatography, optical rotation measurement
Comments, role: Streptococcus pneumoniae type 22F (American type 22); Smith degraded O-deacetylated OPS
Related record ID(s): 625, 627, 628, 112297
NCBI Taxonomy refs (TaxIDs): 1313Reference(s) to other database(s): GTC:G32068JP, GlycomeDB:
4640
Show glycosyltransferases
NMR conditions: in D2O; pH 7 at 310(C) K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
2,4 bDGlcpA 103.97 73.51 76.42 72.36 74.40 175.5
2 bLRhap 99.97 71.53-71.86 71.53-71.86 80.29-81.84 71.53-71.86 17.72
xDEry-ol 61.24 80.29-81.84 71.53-71.86 63.50
1H NMR data:
missing...
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| 2,4 | bDGlcpA | 103.97 | 73.51 | 76.42 | 72.36 | 74.40 | 175.5 |
| 2 | bLRhap | 99.97 | 71.53 71.86 | 71.53 71.86 | 80.29 81.84 | 71.53 71.86 | 17.72 |
| | xDEry-ol | 61.24 | 80.29 81.84 | 71.53 71.86 | 63.50 | |
|
There is only one chemically distinct structure: