Bacterial surface glycans perform a diverse and important set of biological roles, and have been widely used in the treatment of bacterial infectious diseases. The majority of bacterial surface glycans are decorated with diverse rare functional groups, including amido, acetamidino, carboxamido and pyruvate groups. These functional groups are thought to be important constituents for the biological activities of glycans. Chemical synthesis of glycans bearing these functional groups or their variants is essential for the investigation of structure-activity relationships by a medicinal chemistry approach. To date, a broad choice of synthetic methods is available for targeting the different rare functional groups in bacterial surface glycans. This article reviews the structures of naturally occurring rare functional groups in bacterial surface glycans, and the chemical methods used for installation of these groups.
- Compound ID: 3980
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33599
- Compound ID: 16261
|
b-D-ManpNAc3NAcA6NH2-(1-4)-b-D-GlcpNAc3NAcA6NH2-(1-4)-a-D-GalpNAc-(1-4)-b-D-ManpNAc3NAcA-(1-3)-b-D-FucpNAc4N-(1-6)-a-D-GlcpN |
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Structure type: oligomer
Trivial name: O-chain-core
Compound class: core oligosaccharide
- Compound ID: 10541
Structure type: homopolymer
Compound class: O-polysaccharide, O-antigen
- Compound ID: 3719
|
R-3HOBut-(1-5)-a-Psep7Fo-(2-4)-b-D-Xylp-(1-3)-b-D-FucpNAc-(1--/pilin/ |
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Structure type: oligomer
Aglycon: pilin
Trivial name: O-linked glycoprotein
Compound class: O-glycoprotein
- Compound ID: 232
|
b-D-GlcpA-(1-4)-+ R-Pyr-(2-6:2-4)-+
| |
-3)-b-D-Galp-(1-3)-a-D-Galp-(1-3)-b-D-Galp-(1-4)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 413
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-2)-+
|
-3)-a-L-Rhap-(1-3)-b-D-Glcp-(1-3)-a-L-Rhap-(1-3)-a-L-Rhap-(1-3)-a-L-Rhap-(1-2)-a-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 434
|
S-3HOBut-(1-4)-+ S-3HOBut-(1-3)-+
| |
-2)-a-L-Rhap-(1-4)-a-D-GalpNAcA-(1-3)-a-D-QuipNAc4N-(1-2)-b-D-Quip3N-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 3956
|
a-D-Glcp-(1-2)-+ R-3HOBut-(1-3)-+
| |
-6)-a-D-Glcp-(1-4)-b-D-GlcpA-(1-3)-a-D-GlcpNAc-(1-2)-b-D-Fucp3N-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 1957
|
a-D-GlcpA-(1-4)-+
|
-4)-b-D-GlcpA-(1-3)-b-D-GlcpNAc-(1-6)-b-D-GlcpN-(1-
|
L-Ala-(1-2)-+ |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33583
- Compound ID: 2745
|
-4)-b-D-GlcpNAcA3Ac-(1-4)-a-L-FucpNAm3Ac-(1-3)-a-D-6dxylHexpN-4-ulo-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 2799
Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 963
|
-4)-b-D-ManpNAc3NAmA-(1-4)-a-L-GulpNAc3NAcA-(1-3)-b-D-FucpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen, LPS
Reference(s) to other database(s): GlycomeDB:
33665, CCSD:
3423, CBank-STR:7166
- Compound ID: 901
|
-4)-b-D-ManpNAc3NAmA-(1-4)-b-D-ManpNAc3NAcA-(1-3)-b-D-FucpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33661
- Compound ID: 968
|
-4)-a-L-GulpNAc3NAmA-(1-4)-b-D-ManpNAc3NAcA-(1-3)-a-D-FucpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33668
- Compound ID: 967
|
-4)-a-L-GulpNAc3NAmA-(1-4)-b-D-ManpNAc3NAcA-(1-3)-a-D-FucpNAc4Ac-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33667
- Compound ID: 1241
|
4HOBut-(1-5)-+
|
b-D-GlcpNAc-(1-4)-+ |
| |
-3)-a-L-FucpNAm-(1-3)-a-D-GlcpNAc-(1-8)-8eLegp7Ac-(2- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 1446
|
D-Asp2Ac-(4-4)-+
|
-3)-b-D-Quip4N-(1-6)-a-D-GlcpNAc-(1-4)-a-D-GalpA-(1-3)-a-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 1656
|
-4)-a-D-GalpNAcA6NH2-(1-4)-a-D-GalpNAcA6NH2-(1-4)-a-D-GalpNAcA6NH2-(1-3)-a-D-QuiNAc4NAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G59963KI
- Compound ID: 6742
|
S-Pyr-(2-6:2-4)-b-D-Glcp-(1-2)-b-D-GlcpA-(1-2)-+
|
-3)-a-L-Rhap-(1-3)-a-L-Rhap-(1-2)-a-L-Rhap-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, EPS
- Compound ID: 1816
|
L-Ser2Ac-(1-3)-+
|
-4)-b-D-Quip3N-(1-3)-b-D-Ribf-(1-4)-b-D-Galp-(1-3)-a-D-GlcpNAc-(1- |
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Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 2085
|
/Variants 0/-+
|
-6)-a-D-GlcpNAc-(1-3)-a-L-FucpNAc-(1-3)-a-D-GlcpNAc-(1-4)-b-Legp7Ac-(2-
/Variants 0/ is:
50%S-3HOBut-(1-5)-
OR (exclusively)
50%Ac-5)- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 3537
|
S-Pyr-(2-3:2-2)-+
|
-3)-b-D-ManpNAc-(1-3)-a-L-FucpNAc-(1-3)-a-D-GalpNAc-(1-4)-a-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: glycan epitope (glycotope)
Compound class: CPS
- Compound ID: 10483
|
R-3HOBut-(1-3)-+ b-D-Glcp-(1-3)-+
| |
-2)-b-D-Glcp-(1-2)-b-D-Fucp3N4Ac-(1-6)-a-D-GlcpNAc-(1-4)-a-D-GalpNAc-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16267
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-4)-b-D-GlcpA-(1-3)-a-D-Galp-(1-3)-+
|
-4)-a-L-Fucp-(1-4)-a-L-Fucp-(1-3)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 13957
|
Suc-(1-6)-+
|
R-Pyr-(2-6:2-4)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-6)-b-D-Glcp-(1-6)-+
|
-4)-b-D-Glcp-(1-4)-b-D-Glcp6Ac-(1-4)-b-D-Glcp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: EPS-I
Compound class: EPS
- Compound ID: 2350
|
L-Orn-(5-6)-+ D-Asp-(1-4)-+
| |
-4)-b-D-GlcpNAc3NAcA-(1-4)-b-D-ManpNAc3NA-(1-3)-b-D-GlcpNAc-(1-3)-a-D-Fucp4N-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: polysaccharide part of a glycoconjugate, glycan repeating unit of the glycoconjugate
- Compound ID: 2553
|
L-Ala2Fo-(1-3)-+
|
-4)-b-D-GlcpNAc3NA6NH2-(1-4)-b-D-ManpNAc3NAcA6NH2-(1-4)-a-L-GulpNAc3NAcA-(1-3)-b-D-QuipNAc4NAc-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: O-unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16262
|
P-6)-+
|
L-Ala-(1-2)-+ P-2)-+ | a-Kdop-(2-4)-+
| | | |
a-D-Glcp-(1-4)-a-D-GalpN-(1-3)-L-gro-a-D-manHepp7Cm-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop
|
P-4)-+ |
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Structure type: oligomer
Compound class: core oligosaccharide
- Compound ID: 3321
|
S-Pyr-(2-4:2-3)-b-D-Galp-(1-3)-+
|
-3)-b-D-GlcpNAc-(1-4)-b-D-GalpNAc-(1-4)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 2743
|
S,S-3,5HOHex-(1-4)-+
|
-4)-a-L-FucpNAc-(1-3)-a-D-QuipNAc4N-(1-2)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, core oligosaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33625
- Compound ID: 3119
|
a-D-GlcpNAcA6NH2-(1-4)-+
|
-4)-a-D-GalpNAc-(1-3)-a-D-GalpNAcA-(1-3)-a-D-QuipNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
Reference(s) to other database(s): GTC:G23930HU, GlycomeDB:
26270
- Compound ID: 3184
|
L-Ala2Fo-(1-3)-+
|
-4)-b-D-GlcpNAc3NA6NH2-(1-4)-b-D-ManpNAc3NAmA-(1-4)-a-L-GalpNAc3NAcA-(1-3)-b-D-QuipNAc4NAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, O-polysaccharide, O-antigen
- Compound ID: 3188
|
L-Ala2Fo-(1-3)-+
|
-4)-b-D-GlcpNAc3NA6NH2-(1-4)-b-D-GlcpNAc3NAmA-(1-4)-a-L-GalpNAc3NAcA-(1-3)-b-D-6dxylHexpNAc-4-ulo-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, O-polysaccharide, O-antigen
- Compound ID: 3206
|
S-Pyr-(2-4:2-3)-b-D-Galp-(1-6)-+ S-Pyr-(2-4:2-3)-b-D-Galp-(1-6)-+
| |
-3)-a-D-GlcpNAc-(1-3)-b-D-QuipN4NAc-(1-3)-b-D-GalpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 3247
|
S-Pyr-(2-6:2-4)-b-D-Manp-(1-6)-+ b-D-GlcpA-(1-2)-+
| |
-3)-b-D-Glcp-(1-4)-a-D-Galp-(1-4)-b-D-Glcp-(1-4)-b-D-Manp-(1-4)-b-D-Glcp-(1-4)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: simusan
Compound class: EPS
- Compound ID: 14625
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-4)-b-D-GlcpA-(1-4)-+
|
-3)-b-D-Galp-(1-3)-a-D-Galp-(1-6)-b-D-Glcp-(1-
|
b-D-Glcp-(1-6)-+ |
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Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 403
|
R-Pyr-(2-6:2-4)-+
|
b-D-Galf-(1-3)-+ |
| |
-3)-a-D-FucpNAc4N-(1-4)-a-D-GalpNAc-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: zwitterionic polysaccharide A1, zwitterionic polysaccharide, PS A1, polysaccharide A1
Compound class: CPS
- Compound ID: 4077
Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33683
- Compound ID: 4675
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33721
- Compound ID: 3048
|
-2)-b-D-Quip3NAc-(1-4)-a-D-GalpA6NH2-(1-4)-a-D-GalpNAc-(1-4)-b-D-GalpA-(1-3)-a-D-GlcpNAc-(1- |
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Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G86652HR, GlycomeDB:
28132
- Compound ID: 16255
|
2HOSuc-(4-3)-+
|
-4)-a-L-GalpNAmA3Ac-(1-3)-a-D-6dxylHexpN-4-ulo-(1-4)-b-D-GlcpNAc3NA-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-antigen
- Compound ID: 2837
|
L-Ala2Ac-(1-2)-+
|
-3)-b-D-QuipN4N-(1-3)-a-D-GlcpNAm-(1-3)-a-D-QuipNAc4Ac-(1-
|
L-Ala2Ac-(1-4)-+ |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 10551
|
R,R-3HO3MePro-5-oxo-(1-3)-a-D-Fucp3N-(1-3)-+
|
-4)-b-D-ManpNAcA-(1-3)-b-D-QuipNAc4NAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 4662
|
2,4HO3,3,4MePro-5-oxo-(1-4)-+
|
-3)-a-D-GalpNAcA6NH2-(1-4)-a-D-GalpNFoA-(1-3)-a-D-QuipNAc-(1-3)-b-D-Quip4N-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 1657
|
-4)-a-D-GalpNAcA6NH2-(1-4)-a-D-GalpNAcA6NH2-(1-3)-b-D-QuipNAc-(1-2)-b-D-Quip4NFo-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G66306WB, GlycomeDB:
3488
- Compound ID: 5474
|
S-Pyr-(2-6:2-4)-+
|
-2)-b-D-Manp-(1-3)-a-D-ManpNAc-(1-3)-b-L-Rhap-(1-4)-a-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, K-antigen, O-antigen
Reference(s) to other database(s): GlycomeDB:
3523
- Compound ID: 14727
|
R-Pyr-(2-6:2-4)-b-D-Galp-(1-4)-b-D-Manp-(1-4)-b-D-GlcpA-(1-3)-+
|
-4)-a-D-Glcp-(1-4)-a-D-Galp-(1-4)-a-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 6513
|
Pyr-(2-6:2-4)-b-D-Galp-(1-4)-b-D-Glcp-(1-6)-a-D-Glcp-(1-4)-+
|
-3)-b-D-Galp-(1-2)-a-D-GlcpA-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6812
|
Pyr-(2-4:2-3)-a-L-Rhap-(1-4)-+
|
-3)-a-L-Rhap-(1-3)-b-D-Galp-(1-3)-b-D-GlcpA-(1-3)-a-L-Rhap-(1-3)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, K-antigen
- Compound ID: 5209
|
S-Pyr-(2-6:2-4)-b-D-Glcp-(1-2)-+
|
-4)-b-D-GlcpA-(1-3)-b-D-Galf-(1-3)-b-D-Glcp-(1-4)-b-D-Manp-(1-
|
a-L-Rhap-(1-3)-+ |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 16266
|
R-Pyr-(2-6:2-4)-+
|
-4)-b-D-Manp2Ac-(1-3)-a-D-Glcp-(1-4)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: type B EPS
Compound class: EPS
- Compound ID: 5323
|
R-Pyr-(2-6:2-4)-+
|
-3)-a-L-Rhap-(1-3)-a-D-Galp2(75%)Ac-(1-3)-a-D-Galp2(75%)Ac-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 5376
|
R-Pyr-(2-4:2-3)-+
|
-2)-b-D-Galp-(1-4)-b-D-Manp-(1-4)-a-D-Galp-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, O-polysaccharide, K-antigen, O-antigen
- Compound ID: 16269
|
S-Pyr-(2-3:2-2)-+
|
-3)-a-D-Galp-(1-4)-a-D-Galp-(1-3)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 4634
|
-4)-a-D-GalpNAcA3Ac6NH2-(1-4)-a-D-GalpNFoA-(1-3)-a-D-QuipNAc-(1-3)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G72106LC, GlycomeDB:
37362
- Compound ID: 4626
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16256
|
S-3HOBut-(1-4)-+
|
-2)-a-L-Rhap3Ac-(1-6)-a-D-GlcpNAc-(1-4)-a-L-GalpNAcA-(1-3)-b-D-QuipNAc4N-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-antigen
- Compound ID: 5923
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-4)-+
|
-3)-b-D-Glcp-(1-3)-b-D-GlcpA-(1-3)-a-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 5227
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-4)-+
|
-3)-b-D-Galp-(1-3)-a-D-GlcpA-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, EPS
- Compound ID: 16270
|
S-Pyr-(2-4:2-3)-b-D-Galp-(1-4)-b-D-GlcpA-(1-3)-b-D-Manp-(1-4)-a-D-Glcp-(1-3)-b-D-Glcp |
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Structure type: oligomer
Compound class: CPS
- Compound ID: 5928
|
R-Pyr-(2-6:2-5)-b-D-Galf-(1-4)-b-D-GlcpA-(1-3)-+
|
-3)-a-D-Galp-(1-2)-b-D-Galf-(1-6)-a-D-Glcp-(1-3)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6492
|
Pyr-(2-4:2-3)-+
|
-3)-b-D-Glcp-(1-3)-a-L-Rhap-(1-2)-a-L-Rhap-(1-3)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 2258
|
a-D-Galp-(1-3)-+ S-Pyr-(2-6:2-4)-+
| |
-3)-b-D-GlcpA-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: although TSP was present, 13C NMR data were calibrated against acetone at 31.0
Compound class: CPS
- Compound ID: 16271
|
S-Pyr-(2-4:2-3)-b-D-Galp-(1-6)-+
|
-4)-b-D-Glcp-(1-4)-b-D-Manp-(1-4)-b-D-Manp-(1-
|
a-D-GlcpA-(1-3)-+ |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 11368
|
Subst-(1-4)-b-D-Quip4N-(1-6)-+
|
-4)-a-D-GalpNAc-(1-6)-a-D-Glcp-(1-4)-b-D-GlcpA-(1-3)-b-D-GalpNAc-(1-
Subst = (2S,4S)-N-(1-carboxyethyl)alanine = SMILES C[C@H]({3}N[C@H]({1}C(O)=O)C){5}C(O)=O |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 7153
|
3HO2,3MePro-5-oxo-(1-3)-+
|
-2)-b-D-Quip3N-(1-3)-a-L-Rhap2Ac-(1-3)-a-D-FucpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33702
- Compound ID: 6951
|
S-Pyr-(2-6:2-4)-+
|
-4)-b-D-Galp-(1-4)-b-D-Glcp-(1-3)-b-D-Manp-(1-4)-b-D-GlcpA-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: teichuronic acid
Compound class: EPS, cell wall polysaccharide
- Compound ID: 7380
|
S-3HOBut-(1-3)-+
|
-3)-a-D-FucpNAc-(1-2)-b-D-Quip3N-(1-2)-a-D-Rhap-(1-4)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16260
|
a-D-6dTalp2Ac3Me-(1-3)-+
|
-4)-b-D-Glcp3NAmA-(1-4)-a-L-Fucp-(1-3)-a-L-QuipNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-antigen
- Compound ID: 8031
|
S-3HOBut-(1-4)-+
|
-2)-a-D-Quip4N-(1-4)-b-D-GalpNAc-(1-4)-a-L-Rhap-(1-3)-b-D-GlcpNAc6(30%)Ac-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 11702
|
S-3HOBut-(1-2)-D-Ala-(1-4)-+
|
-3)-b-D-Quip4N-(1-6)-a-D-GlcpNAc-(1-3)-a-L-QuipNAc-(1-3)-a-D-GlcpNAc6(30%)Ac-(1- |
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Structure type: polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 8520
|
/Variants 0/-b-L-RhapNAc3N-(1-3)-+
|
-4)-a-D-GlcpNAc-(1-3)-a-L-Rhap-(1-3)-b-D-GlcpNAc-(1-
/Variants 0/ is:
80%S-3HOBut-(1-3)-
OR (exclusively)
20%R-3HOBut-(1-3)- |
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Structure type: polymer chemical repeating unit
Compound class: O-antigen
- Compound ID: 8565
|
R-3HOBut-(1-3)-+
|
-4)-b-D-GlcpNAc3NA-(1-4)-a-L-FucpNAm3Ac-(1-3)-a-D-QuipNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 8703
|
b-D-GlcpNAc6(70%)Ac-(1-4)-+
|
-3)-a-L-GalpNAmA-(1-3)-b-D-QuipNAc4NAc-(1-3)-a-L-Fucp-(1-3)-a-D-GlcpNAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-antigen
- Compound ID: 13160
|
R-2HOSuc2Ac-(4-3)-+
|
-4)-b-D-GlcpNAc3NA6NH2-(1-4)-a-L-GalpNAmA-(1-3)-a-D-QuipNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16259
|
L-Ala2Fo-(1-3)-+
|
-4)-b-D-GlcpNAc3NA6NH2-(1-4)-b-D-ManpNAc3NAmA-(1-4)-b-D-Quip3NAc-(1-3)-a-D-FucpNAc4NAc-(1- |
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Structure type: polymer biological repeating unit
Compound class: O-antigen
- Compound ID: 9037
|
b-D-ManpNAcA-(1-4)-+
|
L-Thr2Ac-(1-2)-+ |
| |
-3)-a-D-FucpN-(1-3)-a-D-GalpNAc-(1-3)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 9059
|
D-Ala-(1-7)-+
|
-8)-a-Legp5Ac-(2-4)-b-D-GlcpA-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
37811
- Compound ID: 11699
|
L-Ser2Ac-(1-4)-+
|
-3)-b-D-Quip4N-(1-3)-b-D-Ribf-(1-4)-a-D-GalpNAc-(1-3)-a-D-GlcpNAc-(1- |
Show graphically |
Structure type: polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 9291
|
R-3HOBut-(1-3)-+
|
-2)-b-D-Glcp-(1-2)-b-D-Fucp3N-(1-6)-a-D-GlcpNAc-(1-4)-a-D-GalpNAc-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 9761
|
L-aThr2Ac-(1-4)-+
|
-3)-b-D-Quip4N-(1-3)-a-D-GalpNAcA-(1-4)-a-D-GalpNAc-(1-3)-a-D-QuipNAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 9905
|
R-3HOBut-(1-3)-+
|
-2)-b-D-Quip3N-(1-2)-b-D-Ribf-(1-4)-b-D-Galp-(1-3)-a-D-FucpNAc-(1- |
Show graphically |
Structure type: polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16268
|
S-Pyr-(2-6:2-4)-b-D-ManpNAc-(1-4)-b-D-GlcpNAc3Ac-(1-6)-a-D-GlcpN |
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Structure type: oligomer
Compound class: cell wall polysaccharide
- Compound ID: 3964
|
R-3HOBut-(1-3)-+ a-D-Glcp-(1-2)-+
| |
-2)-b-D-Glcp-(1-2)-b-D-Fucp3N-(1-6)-a-D-GlcpNAc-(1-4)-b-D-Galp-(1-3)-b-D-GalpNAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 10518
|
S-3HOBut-(1-4)-+
|
-3)-b-L-6dTalpNAc4(%)Ac-(1-4)-a-L-FucpNAc-(1-4)-a-L-FucpNAc-(1-4)-a-L-FucpNAc-(1-3)-b-D-QuipNAc4N-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 2070
|
a-D-QuipNAc4NAc-(1-4)-+
|
S-3HOBut-(1-2)-+ |
| |
-4)-b-D-GlcpA-(1-4)-b-D-GlcpA-(1-3)-b-D-QuipN4N-(1-2)-a-L-IdopA-(1-
|
S-3HOBut-(1-4)-+ |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 732
|
R-Pyr-(2-6:2-4)-+
|
-2)-b-D-Galp3Ac-(1-3)-b-D-GlcpNAc-(1-4)-b-D-GlcpA-(1-3)-b-D-GalpNAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 10617
|
S-3HOBut-(1-4)-+ S-3HOBut-(1-4)-+
| |
-2)-a-L-Rhap-(1-4)-a-D-GalpNAcA-(1-3)-a-D-QuipNAc4N-(1-3)-b-D-QuipNAc4N-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: EPS, O-polysaccharide
- Compound ID: 10737
|
a-D-Quip3NFo-(1-4)-+
|
-3)-a-D-GalpA6NH2-(1-4)-a-D-GalpNAc-(1-4)-a-D-Galp-(1-3)-b-D-GalpNAc-(1- |
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Structure type: polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G66261SB
- Compound ID: 10844
|
D-GroA-(1-4)-+
|
-3)-a-L-FucpNAc-(1-3)-a-L-FucpNAc-(1-3)-b-D-QuipNAc4N-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 11140
|
a-D-GalpA6NH2-(1-2)-+
|
-3)-b-D-GlcpNAc-(1-3)-a-L-Rhap-(1-2)-a-L-Rhap-(1-3)-a-L-Rhap-(1-2)-a-L-Rhap-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G52909WM
- Compound ID: 11383
|
Pyr-(2-6:2-4)-a-D-Galp-(1-4)-b-D-GlcpA-(1-3)-a-D-Galp2Ac-(1-3)-+
|
-4)-a-L-Fucp2Ac-(1-4)-a-L-Fucp-(1-3)-b-D-Glcp-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 9066
|
-3)-D-Rib-ol-(5--P--6)--a-D-Galp-(1-3)-a-L-FucpNAm-(1-3)-b-D-GlcpNAc-(1- |
Show graphically |
Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
38068
- Compound ID: 12332
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-3)-+
|
-4)-a-L-Fucp-(1-6)-a-D-Galp-(1-3)-a-L-Fucp-(1-3)-b-D-GlcpNAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 12549
Structure type: polymer chemical repeating unit
Trivial name: teichuronic acid
Compound class: EPS, cell wall polysaccharide
- Compound ID: 12704
|
R-3HOBut-(1-2)-+ Subst-(1-4)-+
| |
-6)-a-D-Glcp-(1-4)-b-D-GlcpN3NA-(1-3)-b-D-QuipNAc4N-(1-
|
R-3HOBut-(1-3)-+
Subst = (R)-3-aminobutyric acid = SMILES C[C@H](CC(=O){1}O)N |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen, polysaccharide
- Compound ID: 10641
|
R-3HOBut-(1-3)-+
|
-3)-b-L-Rhap2(50%)Ac-(1-4)-b-D-GlcpNAc-(1-2)-b-D-Quip3N-(1-3)-a-L-Rhap-(1-5)-a-Kdop-(2- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16257
|
R-3HOBut-(1-7)-b-Psep5Ac-(2-6)-a-D-Galp-(1-6)-+
|
-3)-b-D-Galp-(1-3)-b-D-GalpNAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
; -3)[Ac(1-2)]bDGalpN(1-3)[Ac(1-5)[Ac(1-7)]bXPsep(2-6)bDGlcp(1-6)]bDGalp(1-
Compound class: CPS
- Compound ID: 13904
|
3,5HOHex-(1-4)-+ R-3HOBut-(1-4)-+
| |
-3)-b-D-QuipNAc4N-(1-3)-a-D-Fucp4N-(1-3)-a-L-FucpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 13724
|
-4)-D-gro-b-L-3,9dglcNonp5NAm7NAc-ulosonic-(2-4)-b-D-GlcpNPp3NFoA6NH2-(1-3)-b-D-FucpNAc4N-(1-
DL3,9dglcNon5N7N-ulosonic = 5,7-diamino-3,5,7,9-tetradeoxy-D-glycero-L-gluco-non-2-ulosonic acid |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16272
|
R-Pyr-(2-4:2-3)-+
|
S-2)-+ |
| |
-4)-b-D-Galp-(1-6)-b-D-Galp-(1-6)-b-D-Galp-(1-
|
S-3)-+ |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-antigen
- Compound ID: 9608
|
R-Pyr-(2-6:2-4)-+
|
-3)-a-D-GalpNAc-(1-4)-a-D-GalpA-(1-3)-a-L-Rhap2Ac-(1-3)-b-D-GlcpNAc-(1- |
Show graphically |
Structure type: polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16254
|
a-Ascp-(1-4)-a-D-GlcpA-(1-4)-+
|
-6)-b-D-GlcpN-(1-4)-b-D-GlcpA-(1-3)-b-D-GalpNAc-(1-
|
L-Ala-(1-2)-+ |
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Structure type: polymer chemical repeating unit
Compound class: O-antigen
- Compound ID: 1831
|
3HO2,3MePro-5-oxo-(1-3)-+
|
-2)-b-D-Quip3N-(1-3)-a-L-Rhap-(1-3)-a-D-FucpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 12682
|
R-3HOBut-(1-4)-a-D-Fucp4N-(1-4)-+
|
-3)-a-D-Fucp-(1-3)-b-D-QuipNAc4NAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 11293
|
S,S-3,5HOHex-(1-4)-+
|
-4)-a-D-GalpNAcA-(1-3)-a-D-QuipNAc4N-(1-3)-a-L-6dxylHexpNAc-4-ulo-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 12356
|
R-3HOBut-(1-7)-+
|
-4)-b-Psep5Ac-(2-6)-b-D-Galf-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16258
|
-2)-D-Rib-ol-(5--P--6)--a-D-Galp-(1-3)-a-L-FucpNAm-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer biological repeating unit
Compound class: O-antigen
- Compound ID: 9697
|
Gly2Fo-(1-4)-+
|
-3)-b-D-Quip4N-(1-4)-a-D-GalpNAcA3Ac6NH2-(1-4)-a-D-GalpNAcA3Ac-(1-3)-a-D-QuipNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 13050
|
R-Lac-(1-3)-a-D-Fucp3N-(1-4)-+
|
-3)-a-D-GalpA6NH2-(1-3)-b-D-QuipNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 13942
|
R-Pyr-(2-6:2-4)-a-D-GalpNAc-(1-6)-+
|
-4)-a-D-GalpNAc-(1-4)-a-D-GalpNAcA-(1-3)-a-D-QuipNAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 16263
|
Pyr-(2-6:2-4)-a-D-Galp-(1-4)-b-D-GlcpA-(1-4)-+
|
-3)-a-D-Galp-(1-6)-b-D-Galp-(1-3)-b-D-Galp-(1-
|
b-D-Glcp-(1-6)-+ |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6795
|
Pyr-(2-6:2-4)-+ b-D-GlcpA-(1-2)-+
| |
-3)-a-D-Galp-(1-3)-a-D-Manp-(1-3)-a-D-Manp-(1-3)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 16264
|
b-D-GlcpA-(1-3)-+ R-Pyr-(2-6:2-4)-+
| |
-4)-a-D-Glcp-(1-2)-a-D-Manp-(1-3)-b-D-Galp-(1-4)-b-D-Galp-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 16265
|
R-Pyr-(2-6:2-4)-+
|
R-Pyr-(2-6:2-4)-+ |
| |
-3)-a-D-Galp-(1-3)-a-D-Galp-(1-3)-a-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 4059
|
S-Pyr-(2-6:2-4)-a-D-Manp-(1-4)-b-D-GlcpA-(1-3)-a-D-Galp-(1-3)-+
|
-3)-b-D-Glcp-(1-4)-a-L-Fucp-(1-4)-a-L-Fucp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 8038
|
S-Pyr-(2-6:2-4)-b-D-GlcpNAc3(70%)Ac-(1-3)-+
|
-4)-a-D-GalpNAc-(1-4)-a-D-Glcp-(1-4)-b-D-Galp-(1-3)-b-D-GalpNAc-(1- |
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Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 1109
|
S-Pyr-(2-6:2-4)-b-D-Manp-(1-4)-b-D-GlcpA-(1-2)-a-D-Manp6Ac-(1-3)-+
|
-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: xanthan
Compound class: EPS, polysaccharide
- Compound ID: 6510
|
a-D-Galp-(1-3)-+
|
Pyr-(2-3:2-2)-+ |
| |
-3)-a-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-a-L-Fucp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 1022
|
a-D-Galp-(1-3)-+
|
S-Pyr-(2-3:2-2)-+ |
| |
-3)-a-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-a-L-Fucp2Ac-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, K-antigen
- Compound ID: 6792
|
Pyr-(2-4:2-3)-b-L-Rhap-(1-4)-a-D-GlcpA-(1-3)-+
|
-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS