Carbapenemase and extended beta-lactamase-producing Klebsiella pneumoniae isolates represent a major health threat, stimulating increasing interest in immunotherapeutic approaches for combating Klebsiella infections. Lipopolysaccharide O antigen polysaccharides offer viable targets for immunotherapeutic development, and several studies have described protection with O-specific antibodies in animal models of infection. O1 antigen is produced by almost half of clinical Klebsiella isolates. The O1 polysaccharide backbone structure is known, but monoclonal antibodies raised against the O1 antigen showed varying reactivity against different isolates that could not be explained by the known structure. Reinvestigation of the structure by NMR spectroscopy revealed the presence of the reported polysaccharide backbone (glycoform O1a), as well as a previously unknown O1b glycoform composed of the O1a backbone modified with a terminal pyruvate group. The activity of the responsible pyruvyltransferase (WbbZ) was confirmed by western immunoblotting and in vitro chemoenzymatic synthesis of the O1b terminus. Bioinformatic data indicate that almost all O1 isolates possess genes required to produce both glycoforms. We describe the presence of O1ab-biosynthesis genes in other bacterial species and report a functional O1 locus on a bacteriophage genome. Homologs of wbbZ are widespread in genetic loci for the assembly of unrelated glycostructures in bacteria and yeast. In K. pneumoniae, simultaneous production of both O1 glycoforms is enabled by the lack of specificity of the ABC transporter that exports the nascent glycan, and the data reported here provide mechanistic understanding of the capacity for evolution of antigenic diversity within an important class of biomolecules produced by many bacteria.
- Compound ID: 16195
|
R-Pyr-(2-6:2-4)-+
|
b-D-Galf-(1-3)-+ |
| |
-3)-a-D-FucpNAc4N-(1-4)-b-D-GalpNAc-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: PSA
Compound class: CPS
- Compound ID: 16511
|
?%a-D-Galp-(1-4)-+ ?%a-D-Galp-(1-4)-+
| |
{{{-a-D-Galp-(1-3)-b-D-Galp-(1-3)-}}}a-D-Galp-(1-3)-{{{-b-D-Galf-(1-3)-a-D-Galp-(1-3)-}}}b-D-Galf-(1-3)-a-D-Galp |
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Structure type: oligomer
Compound class: O-polysaccharide
- Compound ID: 362
Structure type: polymer chemical repeating unit
Trivial name: D-galactan I, galactan I, galactan, D-galactan, microbial carbohydrate determinants, D-galactan-I
Compound class: CPS, EPS, O-polysaccharide, O-antigen, LPS, cell wall polysaccharide
Reference(s) to other database(s): GTC:G85324FU, GlycomeDB:
665
- Compound ID: 16512
|
P0Me-(0-3)-{{{-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp-(1-3)-}}}a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp |
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Structure type: oligomer
Compound class: O-polysaccharide
- Compound ID: 16186
|
a-D-Manp3Me-(1-3)-{{{-b-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-}}}b-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp |
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Structure type: oligomer
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16527
|
R-Pyr-(2-6:2-4)-b-D-Galp-(1-4)-b-D-GlcpA-(1-3)-b-D-Galp-(1-4)-+
|
-3)-b-L-Fucp-(1-4)-a-L-Fucp-(1-3)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: colanic acid
Compound class: EPS
- Compound ID: 6552
|
Suc-(1-6)-+
|
S-Pyr-(2-6:2-4)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-6)-b-D-Glcp-(1-6)-+
|
-4)-b-D-Glcp-(1-4)-b-D-Glcp6Ac-(1-4)-b-D-Glcp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: succinoglycan
Compound class: EPS
- Compound ID: 11015
Structure type: polymer chemical repeating unit
Trivial name: poly(glycosyl phosphate), secondary cell wall polymer (SCWP)
Compound class: cell wall polysaccharide
- Compound ID: 3537
|
S-Pyr-(2-3:2-2)-+
|
-3)-b-D-ManpNAc-(1-3)-a-L-FucpNAc-(1-3)-a-D-GalpNAc-(1-4)-a-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: glycan epitope (glycotope)
Compound class: CPS
- Compound ID: 3321
|
S-Pyr-(2-4:2-3)-b-D-Galp-(1-3)-+
|
-3)-b-D-GlcpNAc-(1-4)-b-D-GalpNAc-(1-4)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 232
|
b-D-GlcpA-(1-4)-+ R-Pyr-(2-6:2-4)-+
| |
-3)-b-D-Galp-(1-3)-a-D-Galp-(1-3)-b-D-Galp-(1-4)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 3540
|
S-Pyr-(2-3:2-2)-+
|
-4)-b-D-GlcpA-(1-4)-a-L-Fucp-(1-3)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: K-antigen, S-53 EPS
Compound class: CPS, EPS
- Compound ID: 3541
|
S-Pyr-(2-6:2-4)-a-D-Manp-(1-4)-+
|
-2)-a-D-GalpA-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 5923
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-4)-+
|
-3)-b-D-Glcp-(1-3)-b-D-GlcpA-(1-3)-a-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6513
|
Pyr-(2-6:2-4)-b-D-Galp-(1-4)-b-D-Glcp-(1-6)-a-D-Glcp-(1-4)-+
|
-3)-b-D-Galp-(1-2)-a-D-GlcpA-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 14919
|
Pyr-(2-6:2-4)-+ b-D-GlcpA-(1-6)-+
| |
-3)-b-D-Glcp-(1-3)-/Variants 1/-/Variants 0/-b-D-Glcp-(1-
|
b-D-Glcp-(1-4)-+
/Variants 0/ is:
b-D-Galp-(1-6)-
OR (exclusively)
a-D-Galp-(1-6)-
/Variants 1/ is:
b-D-Galp-(1-3)-
OR (exclusively)
a-D-Galp-(1-3)- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 3547
|
S-Pyr-(2-6:2-4)-b-D-Glcp-(1-2)-a-D-Manp-(1-4)-+
|
-3)-b-D-Galp-(1-3)-b-D-Glcp-(1-3)-a-D-GlcpA-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 3548
|
S-Pyr-(2-6:2-4)-b-D-Glcp-(1-4)-b-D-GlcpA-(1-2)-+
|
-3)-b-D-Galp-(1-3)-a-L-Rhap-(1-3)-a-L-Rhap-(1-2)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 3550
|
b-D-Glcp-(1-3)-+
|
S-Pyr-(2-6:2-4)-b-D-Manp-(1-4)-+
|
-3)-a-D-GlcpA-(1-3)-a-D-Manp-(1-3)-a-D-Galp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6506
|
Pyr-(2-6:2-4)-b-D-Glcp-(1-2)-+
|
-4)-a-D-GlcpA-(1-3)-a-D-Manp-(1-3)-b-D-Glcp-(1-4)-a-D-Manp-(1-
|
a-L-Rhap-(1-3)-+ |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 16524
|
S-Pyr-(2-6:2-4)-b-D-GlcpNAc-(1-3)-+
|
-4)-a-D-GalpNAc-(1-4)-a-D-Glcp-(1-4)-b-D-Galp-(1-3)-b-D-GalpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
- Compound ID: 16523
|
S-Pyr-(2-6:2-4)-+
|
-3)-b-D-GlcpNAc-(1-3)-b-L-Rhap-(1-4)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
- Compound ID: 5474
|
S-Pyr-(2-6:2-4)-+
|
-2)-b-D-Manp-(1-3)-a-D-ManpNAc-(1-3)-b-L-Rhap-(1-4)-a-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, K-antigen, O-antigen
Reference(s) to other database(s): GlycomeDB:
3523
- Compound ID: 6461
|
Pyr-(2-4:2-3)-+
|
-4)-b-D-GlcpA-(1-4)-a-L-Rhap-(1-2)-a-L-Rhap-(1-2)-a-D-Glcp-(1-3)-b-D-Galp-(1-2)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: cell-surface polysaccharide
Compound class: CPS
- Compound ID: 6462
|
Pyr-(2-4:2-3)-+
|
-3)-a-D-Galp-(1-2)-a-L-Rhap-(1-3)-b-L-Rhap-(1-4)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, EPS
- Compound ID: 5227
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-4)-+
|
-3)-b-D-Galp-(1-3)-a-D-GlcpA-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, EPS
- Compound ID: 5376
|
R-Pyr-(2-4:2-3)-+
|
-2)-b-D-Galp-(1-4)-b-D-Manp-(1-4)-a-D-Galp-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS, O-polysaccharide, K-antigen, O-antigen
- Compound ID: 16522
|
R-Pyr-(2-6:2-4)-b-D-Galp-(1-4)-a-D-GlcpA-(1-3)-+
|
-3)-b-D-Galp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 8066
|
S-Pyr-(2-6:2-5)-b-D-Galf-(1-4)-b-D-GlcpA-(1-3)-+
|
-3)-a-D-Glcp-(1-3)-a-L-Rhap-(1-3)-b-D-Galp-(1-2)-b-D-Galf-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6792
|
Pyr-(2-4:2-3)-b-L-Rhap-(1-4)-a-D-GlcpA-(1-3)-+
|
-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 5209
|
S-Pyr-(2-6:2-4)-b-D-Glcp-(1-2)-+
|
-4)-b-D-GlcpA-(1-3)-b-D-Galf-(1-3)-b-D-Glcp-(1-4)-b-D-Manp-(1-
|
a-L-Rhap-(1-3)-+ |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 16519
|
R-Pyr-(2-6:2-4)-+ b-D-GlcpA-(1-2)-+
| |
-3)-a-D-Galp-(1-3)-a-D-Manp-(1-3)-a-D-Manp-(1-3)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 16521
|
R-Pyr-(2-6:2-4)-a-D-Manp-(1-4)-+
|
-2)-a-D-GalpA-(1-2)-a-D-Manp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6804
|
Pyr-(2-6:2-4)-b-D-Galp-(1-6)-+
|
-4)-b-D-Manp-(1-4)-b-D-Manp-(1-4)-b-D-Glcp-(1-
|
a-D-GlcpA-(1-3)-+ |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 2258
|
a-D-Galp-(1-3)-+ S-Pyr-(2-6:2-4)-+
| |
-3)-b-D-GlcpA-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: although TSP was present, 13C NMR data were calibrated against acetone at 31.0
Compound class: CPS
- Compound ID: 12332
|
R-Pyr-(2-6:2-4)-a-D-Galp-(1-3)-+
|
-4)-a-L-Fucp-(1-6)-a-D-Galp-(1-3)-a-L-Fucp-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 16526
|
S-Pyr-(2-6:2-4)-b-D-Manp-(1-4)-b-D-GlcpA-(1-2)-a-D-Manp-(1-3)-+
|
-4)-b-D-Glcp-(1-4)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: xanthan gum
Compound class: EPS
- Compound ID: 2011
Structure type: polymer chemical repeating unit
Trivial name: D-galactan-III, D-galactan III
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G38255JW, GlycomeDB:
16920
- Compound ID: 12940
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G98197LI
- Compound ID: 13708
|
{{{-b-D-GlcpNAc-(1-5)-b-D-Galf-(1-3)-}}}b-D-GlcpNAc-(1-5)-{{{-b-D-Galf-(1-3)-a-D-Galp-(1-3)-}}}b-D-Galf-(1-3)-a-D-Galp |
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Structure type: oligomer
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G88175RD
- Compound ID: 16513
|
P0Me-(0-3)-{{{-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp-(1-3)-}}}a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp |
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Structure type: oligomer
Compound class: O-polysaccharide
- Compound ID: 16514
|
P0Me-(0-3)-{{{-a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp-(1-3)-}}}a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp |
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Structure type: oligomer
Compound class: O-polysaccharide
- Compound ID: 16520
|
a-D-Galp-(1-3)-+
|
S-Pyr-(2-3:2-2)-+ |
| |
-3)-a-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-a-L-Fucp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6503
|
S-Pyr-(2-4:2-3)-b-D-Galp-(1-4)-a-D-GlcpA-(1-3)-+
|
-3)-b-D-Glcp-(1-4)-b-D-Manp-(1-4)-a-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6819
|
Pyr-(2-4:2-3)-b-D-Galp-(1-6)-+
|
-4)-b-D-Glcp-(1-4)-b-D-Manp-(1-4)-b-D-Manp-(1-
|
a-D-GlcpA-(1-3)-+ |
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Structure type: polymer chemical repeating unit
Trivial name: S-21
Compound class: CPS
- Compound ID: 1592
|
R-Pyr-(2-6:2-4)-+
|
-3)-a-D-GalpNAc-(1-4)-a-D-GalpA-(1-3)-a-L-Rhap2Ac-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
- Compound ID: 16509
|
S-Pyr-(2-4:2-3)-b-D-Galp-(1-3)-{{{-a-D-Galp-(1-3)-b-D-Galp-(1-3)-}}}a-D-Galp-(1-3)-b-D-Galf-(1-3)-{{{-a-D-Galp-(1-3)-b-D-Galf-(1-3)-}}}a-D-Galp-(1-3)-b-D-GlcpNAc-(1-5)-4,7anhKdo |
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Structure type: oligomer
Compound class: O-polysaccharide
- Compound ID: 16510
|
b-D-Galp-(1-3)-{{{-a-D-Galp-(1-3)-b-D-Galp-(1-3)-}}}a-D-Galp-(1-3)-b-D-Galf-(1-3)-{{{-a-D-Galp-(1-3)-b-D-Galf-(1-3)-}}}a-D-Galp-(1-3)-b-D-GlcpNAc-(1-5)-4,7anhKdo |
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Structure type: oligomer
Compound class: O-polysaccharide
- Compound ID: 13035
|
R-Pyr-(2-6:2-4)-+ S-3HOBut-(1-4)-+
| |
-2)-b-D-Galp-(1-3)-b-D-GlcpNAc-(1-4)-b-D-GlcpA-(1-3)-b-D-QuipNAc4N-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: type K20 CPS
Compound class: CPS
- Compound ID: 13033
|
R-Pyr-(2-6:2-4)-+
|
-2)-b-D-Galp-(1-3)-a-D-GlcpNAc-(1-3)-b-D-Galp-(1-3)-b-D-GalpNAc-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: type K82 CPS
Compound class: CPS
- Compound ID: 1597
|
R-Pyr-(2-6:2-4)-+
|
-3)-b-D-GlcpNAc-(1-2)-a-D-Galp-(1-4)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS, O-polysaccharide, O-antigen
- Compound ID: 6649
|
S-Pyr-(2-6:2-4)-+
|
-4)-b-D-GlcpA-(1-4)-b-D-Glcp2Ac-(1-3)-b-D-Manp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6505
|
S-Pyr-(2-6:2-4)-+
|
-3)-b-D-Manp-(1-4)-a-D-GlcpA-(1-3)-a-L-Fucp-(1-3)-b-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6491
|
S-Pyr-(2-6:2-4)-+ a-L-Rhap-(1-2)-+
| |
-3)-b-D-Glcp-(1-3)-b-D-Galp-(1-3)-a-D-Galp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 6492
|
Pyr-(2-4:2-3)-+
|
-3)-b-D-Glcp-(1-3)-a-L-Rhap-(1-2)-a-L-Rhap-(1-3)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS
- Compound ID: 16525
|
Pyr-(2-6:2-4)-a-D-Galp-(1-4)-b-D-GlcpA-(1-4)-+
|
-3)-a-D-Galp-(1-6)-b-D-Galp-(1-3)-b-D-Galp-(1- |
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Structure type: polymer chemical repeating unit
Compound class: CPS