Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Associated disease: infection due to Bartonella henselae [ICD11:
XN862 
]
The structure was elucidated in this paperNCBI PubMed ID: 14766898Journal NLM ID: 2985121RPublisher: Baltimore, MD: American Society for Biochemistry and Molecular Biology
Correspondence: uzaehr

fz-borstel.de
Institutions: Research Center Borstel, Leibniz-Center for Medicine and Biosciences, 23845 Borstel, Germany
The facultative intracellular pathogen Bartonella henselae is responsible for a broad range of clinical manifestations, including the formation of vascular tumors as a result of increased proliferation and survival of colonized endothelial cells. This remarkable interaction with endotoxin-sensitive endothelial cells and the apparent lack of septic shock are considered to be due to a reduced endotoxic activity of the B. henselae lipopolysaccharide. Here, we show that B. henselae ATCC 49882(T) produces a deep-rough-type lipopolysaccharide devoid of O-chain and report on its complete structure and Toll-like receptor-dependent biological activity. The major short-chain lipopolysaccharide was studied by chemical analyses, electrospray ionization, and matrix-assisted laser desorption/ionization mass spectrometry, as well as by NMR spectroscopy after alkaline deacylation. The carbohydrate portion of the lipopolysaccharide consists of a branched trisaccharide containing a glucose residue attached to position 5 of an α-(2→4)-linked 3-deoxy-d-manno-oct-2-ulosonic acid disaccharide. Lipid A is a pentaacylated β-(1'→6)-linked 2,3-diamino-2,3-dideoxy-glucose disaccharide 1,4'-bisphosphate with two amide-linked residues each of 3-hydroxydodecanoic and 3-hydroxyhexadecanoic acids and one residue of either 25-hydroxyhexacosanoic or 27-hydroxyoctacosanoic acid that is O-linked to the acyl group at position 2'. The lipopolysaccharide studied activated Toll-like receptor 4 signaling only to a low extent (1,000-10,000-fold lower compared with that of Salmonella enterica sv. Friedenau) and did not activate Toll-like receptor 2. Some unusual structural features of the B. henselae lipopolysaccharide, including the presence of a long-chain fatty acid, which are shared by the lipopolysaccharides of other bacteria causing chronic intracellular infections (e.g. Legionella and Chlamydia), may provide the molecular basis for low endotoxic potency.
Lipopolysaccharide, structure, structural analysis, biological activity
Structure type: oligomer
Location inside paper: Fig. 8, structure 1
Compound class: core oligosaccharide
Contained glycoepitopes: IEDB_130650,IEDB_130659,IEDB_142488,IEDB_144998,IEDB_146664,IEDB_983931,SB_192
Methods: 1H NMR, methylation, SDS-PAGE, 31P NMR, MALDI-TOF MS, composition analysis, ESI-ICR-MS/MS
Biological activity: endotoxic activity
Comments, role: compound 1 isolated from LPS of B. henselae ATCC 49882T by stepwise O- and N-deacylation
Related record ID(s): 9606
NCBI Taxonomy refs (TaxIDs): 38323Reference(s) to other database(s): GlycomeDB:
27574
Show glycosyltransferases
NMR conditions: in D2O at 300 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6 C7 C8
0,6,6,4 aXKdop ? ? 36.1 68.0 68.0 73.6 70.4 64.5
0,6,6,5 aDGlcp 100.8 73.5 73.9 70.5 72.9 61.4
0,6,6 aXKdop ? ? 36.0 73.1 75.1 73.3 72.0 64.0
0,6,4 P
0,6 bDGlcpN3N 105.2 57.5 59.6 75.3 77.5 64.7
0 aDGlcpN3N 95.7 56.7 55.0 71.5 72.8 70.8
P
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6 H7 H8
0,6,6,4 aXKdop - - 1.72-2.05 3.90 3.90 3.64 3.96 3.65-3.78
0,6,6,5 aDGlcp 5.22 3.42 3.74 3.46 4.01 3.78-3.78
0,6,6 aXKdop - - 1.92-2.02 4.02 4.14 3.68 3.94 3.69-3.85
0,6,4 P
0,6 bDGlcpN3N 4.32 2.48 2.61 3.45 3.57 3.34-3.74
0 aDGlcpN3N 5.26 2.55 2.82 3.26 3.99 3.64-4.18
P
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6 C7/H7 C8/H8
0,6,6,4 aXKdop 36.1/1.72-2.05 68.0/3.90 68.0/3.90 73.6/3.64 70.4/3.96 64.5/3.65-3.78
0,6,6,5 aDGlcp 100.8/5.22 73.5/3.42 73.9/3.74 70.5/3.46 72.9/4.01 61.4/3.78-3.78
0,6,6 aXKdop 36.0/1.92-2.02 73.1/4.02 75.1/4.14 73.3/3.68 72.0/3.94 64.0/3.69-3.85
0,6,4 P
0,6 bDGlcpN3N 105.2/4.32 57.5/2.48 59.6/2.61 75.3/3.45 77.5/3.57 64.7/3.34-3.74
0 aDGlcpN3N 95.7/5.26 56.7/2.55 55.0/2.82 71.5/3.26 72.8/3.99 70.8/3.64-4.18
P
1H NMR data:
| Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 | H7 | H8 |
| 0,6,6,4 | aXKdop |
|
| 1.72 2.05 | 3.90 | 3.90 | 3.64 | 3.96 | 3.65 3.78 |
| 0,6,6,5 | aDGlcp | 5.22 | 3.42 | 3.74 | 3.46 | 4.01 | 3.78 3.78 | |
| 0,6,6 | aXKdop |
|
| 1.92 2.02 | 4.02 | 4.14 | 3.68 | 3.94 | 3.69 3.85 |
| 0,6,4 | P | |
| 0,6 | bDGlcpN3N | 4.32 | 2.48 | 2.61 | 3.45 | 3.57 | 3.34 3.74 | |
| 0 | aDGlcpN3N | 5.26 | 2.55 | 2.82 | 3.26 | 3.99 | 3.64 4.18 | |
| | P | |
|
13C NMR data:
| Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 |
| 0,6,6,4 | aXKdop | ? | ? | 36.1 | 68.0 | 68.0 | 73.6 | 70.4 | 64.5 |
| 0,6,6,5 | aDGlcp | 100.8 | 73.5 | 73.9 | 70.5 | 72.9 | 61.4 | |
| 0,6,6 | aXKdop | ? | ? | 36.0 | 73.1 | 75.1 | 73.3 | 72.0 | 64.0 |
| 0,6,4 | P | |
| 0,6 | bDGlcpN3N | 105.2 | 57.5 | 59.6 | 75.3 | 77.5 | 64.7 | |
| 0 | aDGlcpN3N | 95.7 | 56.7 | 55.0 | 71.5 | 72.8 | 70.8 | |
| | P | |
|
 The spectrum also has 4 signals at unknown positions (not plotted). |
There is only one chemically distinct structure: