CSDB : glyco epitopes

Search for epitope by full structure: partial match

(you can use Graphic editor; a term in CSDB Linear is normalized upon search)


IDs Epitope / Abundance Source organism
SugarBind 86
Glytoucan G82576YO
GlyConnect 1898
??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Escherichia coli
Pseudomonas aeruginosa
Vibrio cholerae
ImmuneEpitopeDB 142489
ChEBI 33984
??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Echinococcus granulosus
ImmuneEpitopeDB 190606
ChEBI 28260
??Gal?

??Gal?
(structure ID 36) has 6194 matches in CSDB

 
ImmuneEpitopeDB 983930
ChEBI 37684
??Man?

??Man?
(structure ID 37976) has 5710 matches in CSDB

 
ImmuneEpitopeDB 149135
ChEBI 2179
?DFucp

?DFucp
(structure ID 36965) has 681 matches in CSDB

 
ImmuneEpitopeDB 137472
ChEBI 12936
?DGal?

?DGal?
(structure ID 19152) has 6194 matches in CSDB

 
SugarBind 7
Glytoucan G68158BT
GlyConnect 1492
?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

Actinomyces naeslundii
Actinomyces viscosus
Clostridium botulinum
Entamoeba histolytica
Escherichia coli
Pseudomonas aeruginosa
ImmuneEpitopeDB 141794
ChEBI 4139
?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

 
ImmuneEpitopeDB 141807
ChEBI 17315
?DGlcpN

?DGlcpN
(structure ID 5928) has 6255 matches in CSDB

Streptococcus anginosus K214-2K
ImmuneEpitopeDB 151531
ChEBI 47977
?DGlcpN

?DGlcpN
(structure ID 5928) has 6255 matches in CSDB

 
ImmuneEpitopeDB 144983
ChEBI 16024
?DMan?

?DMan?
(structure ID 21214) has 5708 matches in CSDB

Homo sapiens
SugarBind 44
Glytoucan G70323CJ
GlyConnect 3570
?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Enterobacteriaceae bacterium
Escherichia coli
Escherichia coli PN7
Klebsiella pneumoniae
Pseudomonas aeruginosa
Salmonella
Salmonella enterica
Serratia marcescens
Shigella flexneri
Vibrio cholerae
SugarBind 72
Glytoucan G70323CJ
GlyConnect 3570
?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 152206
ChEBI 4208
?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 114701
ChEBI 53455
?DXylp

?DXylp
(structure ID 36569) has 2463 matches in CSDB

 
ImmuneEpitopeDB 144562
ChEBI 18287
?LFuc?

?LFuc?
(structure ID 2125) has 1391 matches in CSDB

Schistosoma mansoni Puerto Rico
ImmuneEpitopeDB 152214
ChEBI 2181
?LFucp

?LFucp
(structure ID 35474) has 1390 matches in CSDB

 
ImmuneEpitopeDB 135813
ChEBI 28009
Ac(1-2)bDGlcpN

Ac(1-2)bDGlcpN
(structure ID 7688) has 4584 matches in CSDB

 
SugarBind 85
Glytoucan G07982RO
GlyConnect 2126
Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 38157) has 1029 matches in CSDB

Escherichia coli
SugarBind 74
Glytoucan G07982RO
GlyConnect 2126
Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 38157) has 1029 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 153212
ChEBI 50670
Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]bDGlcpN

Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]bDGlcpN
(structure ID 15180) has 973 matches in CSDB

 
ImmuneEpitopeDB 115015
ChEBI 42564
aDFucp

aDFucp
(structure ID 36578) has 266 matches in CSDB

Ananas comosus
ImmuneEpitopeDB 130701
ChEBI 28729
aDManp

aDManp
(structure ID 15364) has 4986 matches in CSDB

Mycobacterium tuberculosis
SugarBind 67
Glytoucan G70323CJ
GlyConnect 3570
aDManp

aDManp
(structure ID 15364) has 4986 matches in CSDB

Escherichia coli
SugarBind 197
Glytoucan G07490EK
aDManp(1-3)?DManp

aDManp(1-3)?DManp
(structure ID 18402) has 2132 matches in CSDB

Burkholderia cenocepacia J2315
SugarBind 73
Glytoucan G17780OR
aDManp(1-3)[?DManp(1-6)]?DManp

aDManp(1-3)[?DManp(1-6)]?DManp
(structure ID 38156) has 1174 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 548907
ChEBI 131910
aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)?DGlcpN

aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)?DGlcpN
(structure ID 37708) has 672 matches in CSDB

Schistosoma mansoni
SugarBind 33
Glytoucan G20624LQ
GlyConnect 11
aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 15392) has 672 matches in CSDB

Burkholderia oklahomensis EO147
ImmuneEpitopeDB 123886
ChEBI 53458
aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 15392) has 672 matches in CSDB

Armoracia rusticana
SugarBind 198
Glytoucan G51379UR
GlyConnect 747
aDManp(1-6)?DManp

aDManp(1-6)?DManp
(structure ID 36087) has 2034 matches in CSDB

Burkholderia cenocepacia J2315
ImmuneEpitopeDB 141793
ChEBI 53445
aDManp(1-6)?DManp

aDManp(1-6)?DManp
(structure ID 36087) has 2034 matches in CSDB

Cyberlindnera jadinii
ImmuneEpitopeDB 174333
ChEBI 63760
aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Arabidopsis thaliana
ImmuneEpitopeDB 136045
ChEBI 42548
aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Human alphaherpesvirus 1
ImmuneEpitopeDB 145669
ChEBI 62181
aLFucp(1-3)[Ac(1-2)]?DGlcpN

aLFucp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 36915) has 345 matches in CSDB

Armoracia rusticana
ImmuneEpitopeDB 150092
ChEBI 62276
aLFucp(1-3)[Ac(1-2)]bDGlcpN

aLFucp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 1097) has 328 matches in CSDB

Schistosoma mansoni
ImmuneEpitopeDB 167186
ChEBI 62294
aLFucp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]?DGlcpN

aLFucp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]?DGlcpN
(structure ID 37314) has 33 matches in CSDB

Nicotiana benthamiana
ImmuneEpitopeDB 148493
ChEBI 62378
aLFucp(1-3)[Ac(1-2)bDGlcpN(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-3)[Ac(1-2)bDGlcpN(1-4),Ac(1-2)]bDGlcpN
(structure ID 36963) has 124 matches in CSDB

 
ImmuneEpitopeDB 123888
ChEBI 53465
aLFucp(1-3)[aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]?DGlcpN

aLFucp(1-3)[aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]?DGlcpN
(structure ID 36596) has 107 matches in CSDB

 
ImmuneEpitopeDB 423096
ChEBI 67167
aLFucp(1-4)[Ac(1-2)]bDGlcpN

aLFucp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 37572) has 69 matches in CSDB

 
SugarBind 195
Glytoucan G68158BT
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Yersinia pestis
SugarBind 187
Glytoucan G65889KE
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Toxoplasma gondii
SugarBind 88
Glytoucan G65889KE
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Escherichia coli
Fusobacterium nucleatum
SugarBind 165
Glytoucan G65889KE
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 166
Glytoucan G65889KE
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
ImmuneEpitopeDB 136044
ChEBI 27667
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Human alphaherpesvirus 1
ImmuneEpitopeDB 150899
ChEBI 27707
bDGalp(1-3)[Ac(1-2)]?DGlcpN

bDGalp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 55) has 364 matches in CSDB

 
SugarBind 29
Glytoucan G04616ST
GlyConnect 570
bDGalp(1-3)[Ac(1-2)]?DGlcpN

bDGalp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 55) has 364 matches in CSDB

Burkholderia cenocepacia
SugarBind 137
Glytoucan G04616ST
GlyConnect 570
bDGalp(1-3)[Ac(1-2)]?DGlcpN

bDGalp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 55) has 364 matches in CSDB

Legionella pneumophila
Pseudomonas aeruginosa
ImmuneEpitopeDB 142078
ChEBI 18915
bDGalp(1-3)[Ac(1-2)]bDGlcpN

bDGalp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 56) has 294 matches in CSDB

 
ImmuneEpitopeDB 1391962
ChEBI 88144
bDGalp(1-3)[Ac(1-2)]bDGlcpN

bDGalp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 56) has 294 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 143794
ChEBI 61246
bDGalp(1-3)[Ac(1-2)]bDGlcpN

bDGalp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 56) has 294 matches in CSDB

 
SugarBind 155
Glytoucan G00047MO
bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN
(structure ID 13062) has 54 matches in CSDB

Norovirus norwalk
ImmuneEpitopeDB 149556
ChEBI 62265
bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN
(structure ID 13062) has 54 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 461723
ChEBI 88151
bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN
(structure ID 1095) has 49 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 130653
ChEBI 59295
bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN
(structure ID 1095) has 49 matches in CSDB

Helicobacter pylori
ImmuneEpitopeDB 490029
ChEBI 87993
bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN(1-2)aDManp

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN(1-2)aDManp
(structure ID 37664) has 17 matches in CSDB

 
ImmuneEpitopeDB 137340
ChEBI 506227
bDGlcpN

bDGlcpN
(structure ID 36717) has 6045 matches in CSDB

 
ImmuneEpitopeDB 137485
ChEBI 28563
bDManp

bDManp
(structure ID 21346) has 3020 matches in CSDB

Salmonella thompson C1 IS40
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