CSDB : glyco epitopes

Search for epitope by full structure: partial match

(you can use Graphic editor; a term in CSDB Linear is normalized upon search)


IDs Epitope / Abundance Source organism
ImmuneEpitopeDB 142489
ChEBI 33984
??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Echinococcus granulosus
SugarBind 86
Glytoucan G82576YO
GlyConnect 1898
??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Escherichia coli
Pseudomonas aeruginosa
Vibrio cholerae
ImmuneEpitopeDB 190606
ChEBI 28260
??Gal?

??Gal?
(structure ID 36) has 6194 matches in CSDB

 
ImmuneEpitopeDB 983930
ChEBI 37684
??Man?

??Man?
(structure ID 37976) has 5710 matches in CSDB

 
ImmuneEpitopeDB 137472
ChEBI 12936
?DGal?

?DGal?
(structure ID 19152) has 6194 matches in CSDB

 
ImmuneEpitopeDB 137473
ChEBI 28328
?DGal?N

?DGal?N
(structure ID 36724) has 2460 matches in CSDB

Neisseria gonorrhoeae 4505
ImmuneEpitopeDB 141794
ChEBI 4139
?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

 
SugarBind 7
Glytoucan G68158BT
GlyConnect 1492
?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

Actinomyces naeslundii
Actinomyces viscosus
Clostridium botulinum
Entamoeba histolytica
Escherichia coli
Pseudomonas aeruginosa
ImmuneEpitopeDB 144983
ChEBI 16024
?DMan?

?DMan?
(structure ID 21214) has 5708 matches in CSDB

Homo sapiens
SugarBind 72
Glytoucan G70323CJ
GlyConnect 3570
?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 152206
ChEBI 4208
?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Homo sapiens
SugarBind 44
Glytoucan G70323CJ
GlyConnect 3570
?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Enterobacteriaceae bacterium
Escherichia coli
Escherichia coli PN7
Klebsiella pneumoniae
Pseudomonas aeruginosa
Salmonella
Salmonella enterica
Serratia marcescens
Shigella flexneri
Vibrio cholerae
ImmuneEpitopeDB 144562
ChEBI 18287
?LFuc?

?LFuc?
(structure ID 2125) has 1391 matches in CSDB

Schistosoma mansoni Puerto Rico
ImmuneEpitopeDB 152214
ChEBI 2181
?LFucp

?LFucp
(structure ID 35474) has 1390 matches in CSDB

 
ImmuneEpitopeDB 130648
ChEBI 28037
Ac(1-2)?DGalpN

Ac(1-2)?DGalpN
(structure ID 35674) has 2076 matches in CSDB

Streptococcus sp. A
ImmuneEpitopeDB 1391961
ChEBI 88142
Ac(1-2)aDGalpN

Ac(1-2)aDGalpN
(structure ID 9682) has 1144 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 885822
IEDB-SRC 457164
Ac(1-2)aDGalpN

Ac(1-2)aDGalpN
(structure ID 9682) has 1144 matches in CSDB

(bacteria)
ImmuneEpitopeDB 141584
ChEBI 40356
Ac(1-2)aDGalpN

Ac(1-2)aDGalpN
(structure ID 9682) has 1144 matches in CSDB

 
ImmuneEpitopeDB 136906
ChEBI 28061
aDGalp

aDGalp
(structure ID 37) has 4132 matches in CSDB

Trypanosoma cruzi
ImmuneEpitopeDB 151528
ChEBI 61248
aDGalp

aDGalp
(structure ID 37) has 4132 matches in CSDB

 
ImmuneEpitopeDB 144990
ChEBI 60931
aDGalp(1-3)[Ac(1-2)]?DGalpN

aDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 36893) has 76 matches in CSDB

 
ImmuneEpitopeDB 152215
ChEBI 60944
aDGalp(1-3)[Ac(1-2)]aDGalpN

aDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 37087) has 20 matches in CSDB

 
ImmuneEpitopeDB 167071
ChEBI 64528
aDGalp(1-3)[Ac(1-2)]bDGalpN

aDGalp(1-3)[Ac(1-2)]bDGalpN
(structure ID 37312) has 65 matches in CSDB

(bacteria)
ImmuneEpitopeDB 130701
ChEBI 28729
aDManp

aDManp
(structure ID 15364) has 4986 matches in CSDB

Mycobacterium tuberculosis
SugarBind 67
Glytoucan G70323CJ
GlyConnect 3570
aDManp

aDManp
(structure ID 15364) has 4986 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 174333
ChEBI 63760
aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Arabidopsis thaliana
ImmuneEpitopeDB 136045
ChEBI 42548
aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Human alphaherpesvirus 1
ImmuneEpitopeDB 153553
ChEBI 62857
aLFucp(1-2)?DGalp

aLFucp(1-2)?DGalp
(structure ID 35766) has 344 matches in CSDB

Homo sapiens
SugarBind 154
Glytoucan G66086EX
GlyConnect 121
aLFucp(1-2)?DGalp

aLFucp(1-2)?DGalp
(structure ID 35766) has 344 matches in CSDB

Norovirus norwalk NV
Norovirus norwalk VA387
ImmuneEpitopeDB 150948
ChEBI 61529
aLFucp(1-2)bDGalp

aLFucp(1-2)bDGalp
(structure ID 11545) has 265 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 461719
ChEBI 16124
aLFucp(1-2)bDGalp

aLFucp(1-2)bDGalp
(structure ID 11545) has 265 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 241096
ChEBI 84728
aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]?DGalpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35775) has 46 matches in CSDB

 
ImmuneEpitopeDB 461710
ChEBI 88101
aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 37028) has 36 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 150766
ChEBI 62152
aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 37028) has 36 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 150767
ChEBI 62154
aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]bDGalpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]bDGalpN
(structure ID 37029) has 11 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 461711
ChEBI 88103
aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]bDGalpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]bDGalpN
(structure ID 37029) has 11 matches in CSDB

Homo sapiens
SugarBind 195
Glytoucan G68158BT
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Yersinia pestis
SugarBind 187
Glytoucan G65889KE
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Toxoplasma gondii
SugarBind 166
Glytoucan G65889KE
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
ImmuneEpitopeDB 136044
ChEBI 27667
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Human alphaherpesvirus 1
SugarBind 165
Glytoucan G65889KE
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 88
Glytoucan G65889KE
bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Escherichia coli
Fusobacterium nucleatum
SugarBind 8
Glytoucan G78436BB
GlyConnect 1947
bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
ImmuneEpitopeDB 134627
ChEBI 546807
bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Helicobacter pylori
SugarBind 23
Glytoucan G78436BB
GlyConnect 1947
bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
Clostridium tetani
SugarBind 24
Glytoucan G78436BB
GlyConnect 1947
bDGalp(1-3)[Ac(1-2)]?DGalpN

bDGalp(1-3)[Ac(1-2)]?DGalpN
(structure ID 35675) has 419 matches in CSDB

Actinomyces naeslundii WVU45
Escherichia coli
Fusobacterium nucleatum
ImmuneEpitopeDB 143260
ChEBI 61820
bDGalp(1-3)[Ac(1-2)]aDGalpN

bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 6270) has 170 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 1391963
ChEBI 16117
bDGalp(1-3)[Ac(1-2)]aDGalpN

bDGalp(1-3)[Ac(1-2)]aDGalpN
(structure ID 6270) has 170 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 147450
ChEBI 61243
bDGalp(1-3)[Ac(1-2)]bDGalpN

bDGalp(1-3)[Ac(1-2)]bDGalpN
(structure ID 20947) has 269 matches in CSDB

 
ImmuneEpitopeDB 137485
ChEBI 28563
bDManp

bDManp
(structure ID 21346) has 3020 matches in CSDB

Salmonella thompson C1 IS40
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