CSDB : glyco epitopes

Search for epitope by full structure: partial match

(you can use Graphic editor; a term in CSDB Linear is normalized upon search)

IDs Epitope / Abundance Source organism
ImmuneEpitopeDB 140116
ChEBI 28808		-?)?DManp(1-

-?)?DManp(1-
(structure ID 36026) has 2444 matches in CSDB

Saccharomyces cerevisiae
ImmuneEpitopeDB 983930
ChEBI 37684		??Man?

??Man?
(structure ID 37976) has 5710 matches in CSDB

 
ImmuneEpitopeDB 151531
ChEBI 47977		?DGlcpN

?DGlcpN
(structure ID 5928) has 6255 matches in CSDB

 
ImmuneEpitopeDB 141807
ChEBI 17315		?DGlcpN

?DGlcpN
(structure ID 5928) has 6255 matches in CSDB

Streptococcus anginosus K214-2K
ImmuneEpitopeDB 144983
ChEBI 16024		?DMan?

?DMan?
(structure ID 21214) has 5708 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 152206
ChEBI 4208		?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Homo sapiens
SugarBind 44
Glytoucan G70323CJ
GlyConnect 3570		?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Enterobacteriaceae bacterium
Escherichia coli
Escherichia coli PN7
Klebsiella pneumoniae
Pseudomonas aeruginosa
Salmonella
Salmonella enterica
Serratia marcescens
Shigella flexneri
Vibrio cholerae
SugarBind 72
Glytoucan G70323CJ
GlyConnect 3570		?DManp

?DManp
(structure ID 21660) has 5708 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 114701
ChEBI 53455		?DXylp

?DXylp
(structure ID 36569) has 2463 matches in CSDB

 
ImmuneEpitopeDB 1394182
ChEBI 37676		?LMan?

?LMan?
(structure ID 38050) has 390 matches in CSDB

 
ImmuneEpitopeDB 135813
ChEBI 28009		Ac(1-2)bDGlcpN

Ac(1-2)bDGlcpN
(structure ID 7688) has 4584 matches in CSDB

 
SugarBind 74
Glytoucan G07982RO
GlyConnect 2126		Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 38157) has 1029 matches in CSDB

Escherichia coli
SugarBind 85
Glytoucan G07982RO
GlyConnect 2126		Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 38157) has 1029 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 153212
ChEBI 50670		Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]bDGlcpN

Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]bDGlcpN
(structure ID 15180) has 973 matches in CSDB

 
SugarBind 67
Glytoucan G70323CJ
GlyConnect 3570		aDManp

aDManp
(structure ID 15364) has 4986 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 130701
ChEBI 28729		aDManp

aDManp
(structure ID 15364) has 4986 matches in CSDB

Mycobacterium tuberculosis
SugarBind 197
Glytoucan G07490EK		aDManp(1-3)?DManp

aDManp(1-3)?DManp
(structure ID 18402) has 2132 matches in CSDB

Burkholderia cenocepacia J2315
SugarBind 73
Glytoucan G17780OR		aDManp(1-3)[?DManp(1-6)]?DManp

aDManp(1-3)[?DManp(1-6)]?DManp
(structure ID 38156) has 1174 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 151079
ChEBI 61075		aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]?DManp

aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]?DManp
(structure ID 37074) has 612 matches in CSDB

Mus musculus
ImmuneEpitopeDB 429156
ChEBI 71503		aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp

aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp
(structure ID 37617) has 596 matches in CSDB

Lentivirus sp. HIV-1
ImmuneEpitopeDB 187201
ChEBI 71514		aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN

aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN
(structure ID 15146) has 299 matches in CSDB

Lentivirus sp. HIV-1
ImmuneEpitopeDB 857734
ChEBI 140841		aDManp(1-3)[aDManp(1-6)]aDManp(1-6)?DManp

aDManp(1-3)[aDManp(1-6)]aDManp(1-6)?DManp
(structure ID 37859) has 626 matches in CSDB

Mycobacterium
ImmuneEpitopeDB 548907
ChEBI 131910		aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)?DGlcpN

aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)?DGlcpN
(structure ID 37708) has 672 matches in CSDB

Schistosoma mansoni
ImmuneEpitopeDB 123886
ChEBI 53458		aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 15392) has 672 matches in CSDB

Armoracia rusticana
SugarBind 33
Glytoucan G20624LQ
GlyConnect 11		aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 15392) has 672 matches in CSDB

Burkholderia oklahomensis EO147
ImmuneEpitopeDB 164174
ChEBI 61663		aDManp(1-3)aDManp

aDManp(1-3)aDManp
(structure ID 18577) has 1730 matches in CSDB

Candida albicans
SugarBind 77
Glytoucan G47395XN		aDManp(1-3)aDManp(1-6)?DManp

aDManp(1-3)aDManp(1-6)?DManp
(structure ID 38160) has 766 matches in CSDB

Escherichia coli
ImmuneEpitopeDB 141793
ChEBI 53445		aDManp(1-6)?DManp

aDManp(1-6)?DManp
(structure ID 36087) has 2034 matches in CSDB

Cyberlindnera jadinii
SugarBind 198
Glytoucan G51379UR
GlyConnect 747		aDManp(1-6)?DManp

aDManp(1-6)?DManp
(structure ID 36087) has 2034 matches in CSDB

Burkholderia cenocepacia J2315
ImmuneEpitopeDB 153220
ChEBI 62357		aDManp(1-6)aDManp

aDManp(1-6)aDManp
(structure ID 7984) has 1576 matches in CSDB

 
ImmuneEpitopeDB 141828
ChEBI 61611		aDManp(1-6)aDManp(1-6)?DManp

aDManp(1-6)aDManp(1-6)?DManp
(structure ID 36840) has 1078 matches in CSDB

Cyberlindnera jadinii
ImmuneEpitopeDB 137340
ChEBI 506227		bDGlcpN

bDGlcpN
(structure ID 36717) has 6045 matches in CSDB

 
ImmuneEpitopeDB 137485
ChEBI 28563		bDManp

bDManp
(structure ID 21346) has 3020 matches in CSDB

Salmonella thompson C1 IS40
ImmuneEpitopeDB 174332
ChEBI 63758		bDXylp

bDXylp
(structure ID 37315) has 2267 matches in CSDB

Arabidopsis thaliana
ImmuneEpitopeDB 167188
ChEBI 28161		bDXylp

bDXylp
(structure ID 37315) has 2267 matches in CSDB

Spermatophyta
ImmuneEpitopeDB 145668
ChEBI 62132		bDXylp(1-2)?DManp

bDXylp(1-2)?DManp
(structure ID 36914) has 394 matches in CSDB

Armoracia rusticana
ImmuneEpitopeDB 148492
ChEBI 62376		bDXylp(1-2)[aDManp(1-6),aDManp(1-3)]bDManp

bDXylp(1-2)[aDManp(1-6),aDManp(1-3)]bDManp
(structure ID 36962) has 179 matches in CSDB

 
ImmuneEpitopeDB 123887
ChEBI 53464		bDXylp(1-2)[aDManp(1-6),aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN

bDXylp(1-2)[aDManp(1-6),aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN
(structure ID 25516) has 138 matches in CSDB

 
ImmuneEpitopeDB 148491
ChEBI 62373		bDXylp(1-2)[aDManp(1-6)]bDManp

bDXylp(1-2)[aDManp(1-6)]bDManp
(structure ID 36961) has 199 matches in CSDB

 
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