CSDB : glyco epitopes

Search for epitope by full structure: partial match

(you can use Graphic editor; a term in CSDB Linear is normalized upon search)

IDs Epitope / Abundance Source organism
SugarBind 86
Glytoucan G82576YO
GlyConnect 1898		??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Escherichia coli
Pseudomonas aeruginosa
Vibrio cholerae
ImmuneEpitopeDB 142489
ChEBI 33984		??Fuc?

??Fuc?
(structure ID 36861) has 1973 matches in CSDB

Echinococcus granulosus
ImmuneEpitopeDB 190606
ChEBI 28260		??Gal?

??Gal?
(structure ID 36) has 6194 matches in CSDB

 
ImmuneEpitopeDB 137472
ChEBI 12936		?DGal?

?DGal?
(structure ID 19152) has 6194 matches in CSDB

 
SugarBind 7
Glytoucan G68158BT
GlyConnect 1492		?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

Actinomyces naeslundii
Actinomyces viscosus
Clostridium botulinum
Entamoeba histolytica
Escherichia coli
Pseudomonas aeruginosa
ImmuneEpitopeDB 141794
ChEBI 4139		?DGalp

?DGalp
(structure ID 35765) has 6174 matches in CSDB

 
ImmuneEpitopeDB 141807
ChEBI 17315		?DGlcpN

?DGlcpN
(structure ID 5928) has 6255 matches in CSDB

Streptococcus anginosus K214-2K
ImmuneEpitopeDB 151531
ChEBI 47977		?DGlcpN

?DGlcpN
(structure ID 5928) has 6255 matches in CSDB

 
ImmuneEpitopeDB 144562
ChEBI 18287		?LFuc?

?LFuc?
(structure ID 2125) has 1391 matches in CSDB

Schistosoma mansoni Puerto Rico
ImmuneEpitopeDB 152214
ChEBI 2181		?LFucp

?LFucp
(structure ID 35474) has 1390 matches in CSDB

 
ImmuneEpitopeDB 241103
ChEBI 71269		Ac(1-2)aDGlcpN(1-3)bDGalp(1-4)[Ac(1-2)]bDGlcpN

Ac(1-2)aDGlcpN(1-3)bDGalp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 37518) has 7 matches in CSDB

 
ImmuneEpitopeDB 885811
ChEBI 71323		Ac(1-2)aDGlcpN(1-6)bDGalp(1-4)[Ac(1-2)]bDGlcpN

Ac(1-2)aDGlcpN(1-6)bDGalp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 37875) has 8 matches in CSDB

(bacteria)
ImmuneEpitopeDB 135813
ChEBI 28009		Ac(1-2)bDGlcpN

Ac(1-2)bDGlcpN
(structure ID 7688) has 4584 matches in CSDB

 
SugarBind 173
Glytoucan G02880JU		Ac(1-2)bDGlcpN(1-3)?DGalp

Ac(1-2)bDGlcpN(1-3)?DGalp
(structure ID 38218) has 691 matches in CSDB

Streptococcus pneumoniae
ImmuneEpitopeDB 241107
ChEBI 71398		Ac(1-2)bDGlcpN(1-4)bDGalp(1-4)[Ac(1-2)]bDGlcpN

Ac(1-2)bDGlcpN(1-4)bDGalp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 37522) has 9 matches in CSDB

 
SugarBind 100
Glytoucan G88393MK		aLFuc(1-2)bDGalp(1-3)[Ac(1-2)]?DGlcpN

aLFuc(1-2)bDGalp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 38176) has 46 matches in CSDB

Escherichia coli
Helicobacter pylori
Helicobacter pylori NCTC 11638
Norovirus norwalk NV
Norovirus norwalk VA387
ImmuneEpitopeDB 174333
ChEBI 63760		aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Arabidopsis thaliana
ImmuneEpitopeDB 136045
ChEBI 42548		aLFucp

aLFucp
(structure ID 36693) has 1346 matches in CSDB

Human alphaherpesvirus 1
ImmuneEpitopeDB 153553
ChEBI 62857		aLFucp(1-2)?DGalp

aLFucp(1-2)?DGalp
(structure ID 35766) has 344 matches in CSDB

Homo sapiens
SugarBind 154
Glytoucan G66086EX
GlyConnect 121		aLFucp(1-2)?DGalp

aLFucp(1-2)?DGalp
(structure ID 35766) has 344 matches in CSDB

Norovirus norwalk NV
Norovirus norwalk VA387
ImmuneEpitopeDB 461719
ChEBI 16124		aLFucp(1-2)bDGalp

aLFucp(1-2)bDGalp
(structure ID 11545) has 265 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 150948
ChEBI 61529		aLFucp(1-2)bDGalp

aLFucp(1-2)bDGalp
(structure ID 11545) has 265 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 149554
ChEBI 62259		aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]?DGlcpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 35764) has 46 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 130652
ChEBI 59296		aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]bDGlcpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 1100) has 32 matches in CSDB

Helicobacter pylori
ImmuneEpitopeDB 461709
ChEBI 88085		aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]bDGlcpN

aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 1100) has 32 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 131182
ChEBI 59440		aLFucp(1-2)bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN

aLFucp(1-2)bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN
(structure ID 36642) has 14 matches in CSDB

Homo sapiens
SugarBind 146
Glytoucan G39211DH		aLFucp(1-2)bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN

aLFucp(1-2)bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN
(structure ID 36642) has 14 matches in CSDB

Norovirus norwalk Boxer
Norovirus norwalk HV
Norovirus norwalk MxV
Norovirus norwalk NV
Norovirus norwalk PiV
Norovirus norwalk VA387
ImmuneEpitopeDB 137354
ChEBI 59441		aLFucp(1-2)bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-2)bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN
(structure ID 2026) has 9 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 461724
ChEBI 88160		aLFucp(1-2)bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-2)bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN
(structure ID 2026) has 9 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 145669
ChEBI 62181		aLFucp(1-3)[Ac(1-2)]?DGlcpN

aLFucp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 36915) has 345 matches in CSDB

Armoracia rusticana
ImmuneEpitopeDB 150092
ChEBI 62276		aLFucp(1-3)[Ac(1-2)]bDGlcpN

aLFucp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 1097) has 328 matches in CSDB

Schistosoma mansoni
ImmuneEpitopeDB 952752
ChEBI 145708		aLFucp(1-3)[aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-3)[aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4),Ac(1-2)]bDGlcpN
(structure ID 3623) has 55 matches in CSDB

Helicobacter pylori
ImmuneEpitopeDB 144556
ChEBI 61325		aLFucp(1-3)[aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-3)[aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4),Ac(1-2)]bDGlcpN
(structure ID 3623) has 55 matches in CSDB

Helicobacter pylori
SugarBind 157
Glytoucan G01187XC
GlyConnect 3238		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]?DGlcpN

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]?DGlcpN
(structure ID 13063) has 125 matches in CSDB

Norovirus norwalk VA207
ImmuneEpitopeDB 149557
ChEBI 62287		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]?DGlcpN

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]?DGlcpN
(structure ID 13063) has 125 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 461720
ChEBI 88161		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN
(structure ID 1033) has 125 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 130654
ChEBI 59294		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN
(structure ID 1033) has 125 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 2151203
ChEBI 153716		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)?DGalp

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)?DGalp
(structure ID 38096) has 66 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 147455
ChEBI 62307		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)bDGalp

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-3)bDGalp
(structure ID 7286) has 65 matches in CSDB

Mus musculus
ImmuneEpitopeDB 2151204
ChEBI 153628		aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-6)?DGalp

aLFucp(1-3)[bDGalp(1-4),Ac(1-2)]bDGlcpN(1-6)?DGalp
(structure ID 38097) has 5 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 423096
ChEBI 67167		aLFucp(1-4)[Ac(1-2)]bDGlcpN

aLFucp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 37572) has 69 matches in CSDB

 
SugarBind 166
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 165
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Ricinus communis
SugarBind 195
Glytoucan G68158BT		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Yersinia pestis
SugarBind 88
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Escherichia coli
Fusobacterium nucleatum
SugarBind 187
Glytoucan G65889KE		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Toxoplasma gondii
ImmuneEpitopeDB 136044
ChEBI 27667		bDGalp

bDGalp
(structure ID 38) has 5797 matches in CSDB

Human alphaherpesvirus 1
ImmuneEpitopeDB 150899
ChEBI 27707		bDGalp(1-3)[Ac(1-2)]?DGlcpN

bDGalp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 55) has 364 matches in CSDB

 
SugarBind 29
Glytoucan G04616ST
GlyConnect 570		bDGalp(1-3)[Ac(1-2)]?DGlcpN

bDGalp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 55) has 364 matches in CSDB

Burkholderia cenocepacia
SugarBind 137
Glytoucan G04616ST
GlyConnect 570		bDGalp(1-3)[Ac(1-2)]?DGlcpN

bDGalp(1-3)[Ac(1-2)]?DGlcpN
(structure ID 55) has 364 matches in CSDB

Legionella pneumophila
Pseudomonas aeruginosa
ImmuneEpitopeDB 1391962
ChEBI 88144		bDGalp(1-3)[Ac(1-2)]bDGlcpN

bDGalp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 56) has 294 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 143794
ChEBI 61246		bDGalp(1-3)[Ac(1-2)]bDGlcpN

bDGalp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 56) has 294 matches in CSDB

 
ImmuneEpitopeDB 142078
ChEBI 18915		bDGalp(1-3)[Ac(1-2)]bDGlcpN

bDGalp(1-3)[Ac(1-2)]bDGlcpN
(structure ID 56) has 294 matches in CSDB

 
SugarBind 155
Glytoucan G00047MO		bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN
(structure ID 13062) has 54 matches in CSDB

Norovirus norwalk
ImmuneEpitopeDB 149556
ChEBI 62265		bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]?DGlcpN
(structure ID 13062) has 54 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 130653
ChEBI 59295		bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN
(structure ID 1095) has 49 matches in CSDB

Helicobacter pylori
ImmuneEpitopeDB 461723
ChEBI 88151		bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN

bDGalp(1-3)[aLFucp(1-4),Ac(1-2)]bDGlcpN
(structure ID 1095) has 49 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 140108
ChEBI 60152		bDGalp(1-4)[Ac(1-2)]?DGlcpN

bDGalp(1-4)[Ac(1-2)]?DGlcpN
(structure ID 15260) has 708 matches in CSDB

Neisseria gonorrhoeae
SugarBind 30
Glytoucan G51331BY
GlyConnect 2118		bDGalp(1-4)[Ac(1-2)]?DGlcpN

bDGalp(1-4)[Ac(1-2)]?DGlcpN
(structure ID 15260) has 708 matches in CSDB

Burkholderia cenocepacia
Clostridium botulinum A
Escherichia coli
Fusobacterium nucleatum
Legionella pneumophila
Neisseria gonorrhoeae
Pseudomonas aeruginosa
ImmuneEpitopeDB 140122
ChEBI 25001		bDGalp(1-4)[Ac(1-2)]bDGlcpN

bDGalp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 1101) has 649 matches in CSDB

Haemophilus ducreyi 35000HP
ImmuneEpitopeDB 130646
ChEBI 16153		bDGalp(1-4)[Ac(1-2)]bDGlcpN

bDGalp(1-4)[Ac(1-2)]bDGlcpN
(structure ID 1101) has 649 matches in CSDB

Neisseria gonorrhoeae
ImmuneEpitopeDB 130697
ChEBI 59387		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)?DGalp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)?DGalp
(structure ID 36633) has 421 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 137776
ChEBI 59487		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp
(structure ID 1370) has 416 matches in CSDB

Haemophilus ducreyi
ImmuneEpitopeDB 150939
ChEBI 62130		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)[Ac(1-2)]?DGlcpN

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-3)bDGalp(1-4)[Ac(1-2)]?DGlcpN
(structure ID 37059) has 115 matches in CSDB

 
ImmuneEpitopeDB 158533
ChEBI 60214		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-6)?DGalp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-6)?DGalp
(structure ID 37244) has 31 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 153529
ChEBI 62184		bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-6)bDGalp

bDGalp(1-4)[Ac(1-2)]bDGlcpN(1-6)bDGalp
(structure ID 37143) has 28 matches in CSDB

Homo sapiens
ImmuneEpitopeDB 137340
ChEBI 506227		bDGlcpN

bDGlcpN
(structure ID 36717) has 6045 matches in CSDB

 
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