Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
The structure was elucidated in this paperNCBI PubMed ID: 33342516Publication DOI: 10.1016/j.carres.2020.108223Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: A. Aman <afaman

uok.edu.pk>
Institutions: The Karachi Institute of Biotechnology & Genetic Engineering (KIBGE), University of Karachi, Karachi, 75270, Pakista, Department of Materials Engineering, NED University of Engineering and Technology (NEDUET), Karachi, 75270, Pakistan
Fructan based biopolymers have been extensively characterized and explored for their potential applications. Linear chained biopolymers, like levan-type fructan, have gained attention because they have exhibited unconventional stretchable and unbendable properties along with biodegradable and biocompatible nature. Current study deals with the chemical characterization and cytotoxic analysis of fructose based exopolysaccharide that was extracellularly produced by an indigenously isolated bacterial species (Zymomonas mobilis KIBGE-IB14). Maximum yield of exopolysaccharide (44.7 gL-1) was attained after 72 h of incubation at 30 °C under shaking conditions (180 rpm) when the culture medium was supplemented with 150.0 gL-1 of sucrose as a sole carbon source. This exopolysaccharide displayed high water solubility index (96.0%) with low water holding capacity (17.0%) and an intrinsic viscosity of about 0.447 dL g-1. This biopolymer exhibited a characteristic linear homopolysaccharide structure of levan when characterized using Fourier Transform Infrared (FTIR), Nuclear Magnetic Resonance (NMR) spectroscopy (1H, 13C, TOCSY and NOESY) while, Atomic Force Microscopy (AFM) revealed its pointed and thorny structure. The decomposition temperature of levan was approximately 245 °C as revealed by Thermal Gravimetric Analysis (TGA). X-Ray Diffraction (XRD) results revealed its amorphous nature with crystalline phase. Cytotoxicity of different concentrations of levan was investigated against mouse fibroblast cell lines by measuring their cellular metabolic activity and it was noticed that a higher concentration of levan (2.0 mg ml-1) permitted the normal cell growth of NIH/3T3 cell lines. This non-cytotoxic and biocompatible nature suggests that this levan has the capability to be utilized in food and drug-based formulations as it exhibited biomedical potential.
exopolysaccharide, cytotoxicity, levan, chemical characterization, NIH/3T3 cell line
Structure type: homopolymer
Location inside paper: graphical abstract
Trivial name: levan, levan-type polysaccharide
Compound class: EPS
Contained glycoepitopes: IEDB_923066
Methods: 13C NMR, 1H NMR, NMR-2D, X-ray, sugar analysis, FTIR, viscosity measurement, SEM, AFM, emulsifying activity determination, TGA, WSI, WHC, cytotoxic analysis
Comments, role: NMR temperature was not specified.
NCBI Taxonomy refs (TaxIDs): 542Reference(s) to other database(s): GTC:G29465PK, GlycomeDB:
9593
Show glycosyltransferases
NMR conditions: in D2O
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
bDFruf 62.59 106.9 78.98 77.89 82.99 65.32
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
bDFruf 3.61-3.70 - 4.10 4.03 3.93 3.48-3.82
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
bDFruf 62.59/3.61-3.70 78.98/4.10 77.89/4.03 82.99/3.93 65.32/3.48-3.82
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| bDFruf | 3.61 3.70 |
| 4.10 | 4.03 | 3.93 | 3.48 3.82 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| bDFruf | 62.59 | 106.9 | 78.98 | 77.89 | 82.99 | 65.32 |
|
There is only one chemically distinct structure:
Taxonomic group: bacteria / Firmicutes
(Phylum: Firmicutes)
The structure was elucidated in this paperNCBI PubMed ID: 34561011Publication DOI: 10.1016/j.carbpol.2021.118613Journal NLM ID: 8307156Publisher: Elsevier
Correspondence: B.M. Carvalho <bruno.carvalho

upe.br>
Institutions: Biological Sciences Institute, University of Pernambuco (ICB/UPE), Recife, Brazil, Max Planck Institute for Experimental Medicine, Göttingen, Germany, Institute of Chemistry and Biotechnology, Federal University of Alagoas, Maceio, Brazil, Department of Virology, Aggeu Magalh˜aes Institute (IAM/FIOCRUZ Pernambuco), Recife, Brazil
Levan is a high-valued polysaccharide of fructose produced by several microbial species. These polysaccharides have been described as effective therapeutic agents in some human disease conditions, such as cancer, heart diseases and diabetes. The objective of this study was to examine the effect of levan (β-(2→6)-fructan) produced through sucrose fermentation by B. subtilis var. natto on the proliferation rate, cytotoxicity, and apoptosis of human neuroblastoma SH-SY5Y cells. It was obtained 41.44 g/L of levan in 18 h by biotechnological fermentation and SH-SY5Y cells were exposed to 1000 μg/mL of levan. The treatment with 1000 μg/mL of levan induced apoptosis in SH-SY5Y cancer cells by the significant increase in Annexin V/7-AAD and caspase 3/7 activation, but did not decrease proliferation or triggered a cytotoxic effect. 1000 μg/mL levan treatment is a promising therapeutic strategy for SH-SY5Y neuroblastoma cells
exopolysaccharide, live-cell analysis, neoplastic cells
Structure type: homopolymer ; 8800
Location inside paper: abstract, table 2
Trivial name: levan
Compound class: EPS
Contained glycoepitopes: IEDB_923066
Methods: 13C NMR, 1H NMR, NMR-2D, statistical analysis, fermentation, cell proliferation assay, cytotoxic analysis, apoptosis assays
NCBI Taxonomy refs (TaxIDs): 86029
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
bDFruf 60.1 104.3 76.5 75.3 80.3 63.4
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
bDFruf 3.58-3.67 - 4.09 4.00 3.86 3.62
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
bDFruf 60.1/3.58-3.67 76.5/4.09 75.3/4.00 80.3/3.86 63.4/3.62
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
| bDFruf | 3.58 3.67 |
| 4.09 | 4.00 | 3.86 | 3.62 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
| bDFruf | 60.1 | 104.3 | 76.5 | 75.3 | 80.3 | 63.4 |
|
There is only one chemically distinct structure: