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1. (Article ID: 1095)
Perepelov AV, Shashkov AS, Senchenkova SN, Knirel YA, Literacka E, Kaca W
Structure of the O-specific polysaccharide of the bacterium Proteus mirabilis O29
Biochemistry (Moscow) 65(2) (2000)
176-179
An O-specific polysaccharide was obtained by mild acid degradation of P. mirabilis O29 lipopolysaccharide (LPS) and found to contain 2-acetamido-2-deoxy-D-galactose and D-glucuronic acid (D-GlcA) in the ratio 3:1. Studies fo the polysaccharide by 1H- and 13C NMR spectroscopy including two-dimensional correlation spectroscopy (COSY), total correlation spectroscopy (TOCSY), nuclear Overhauser effect spectroscopy (NOESY), and H-detected 1H,13C-heteronuclear multiple-quantum coherence (HMQC) experiments demonstrated the following structure of the branched tetrasaccharide repeating unit: (see formula in text).
Lipopolysaccharide, LPS, structure, strain, structural, characterization, polysaccharide, O-antigen, bacteria, O-specific, O-specific polysaccharide, Proteus, Proteus mirabilis, serological, chemical, immunochemical
NCBI PubMed ID: 10713543Journal NLM ID: 0376536Publisher: Nauka/Interperiodica
Correspondence: perepel

ioc.ac.ru
Institutions: Institute of Microbiology and Immunology, University of Lodz, Poland, Center of Microbiology and Virology, Polish Academy of Sciences, Lodz, Poland, N.D. Zelinsky Institute of Organic Chamisry, Russian Academy of Sciences, Leninsky pr. 47, Moscow, 119991 Russia
Methods: NMR-2D, NMR, sugar analysis, determination of absolute configuration
The publication contains the following compound(s):
- Compound ID: 885
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a-D-GalpNAc-(1-3)-+
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-3)-b-D-GalpNAc-(1-4)-b-D-GalpNAc-(1-4)-b-D-GlcpA-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G52894IP, GlycomeDB:
27747
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2. (Article ID: 2259)
Holst O, Brade H
Isolation and structural analysis of the tetrasaccharide 3-deoxy-5-O-[3-O-(3-O-a-D-glucopyranosyl-L-glycero-a-D-manno-heptopyranosyl)-L-glycero-a-D-manno-heptopyranosyl]-D-manno-octulosonic acid from the core region of the lipopolysaccharide of Salmonella minnesota strain R5 (rough mutant chemotype RcP-)
Carbohydrate Research 245 (1993)
159-163
No abstract available
Publication DOI: 10.1016/0008-6215(93)80069-QJournal NLM ID: 0043535Publisher: Elsevier
Institutions: Forschungsinstitut Borstel, Institut für Experimentelle Biologie und Medizin, W-2061 Borstel FRG
Methods: 13C NMR, 1H NMR, NMR-2D
The publication contains the following compound(s):
- Compound ID: 5411
|
a-D-Glcp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-Kdop |
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Structure type: oligomer
Compound class: LPS
Reference(s) to other database(s): GTC:G83720OP, GlycomeDB:
37962
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3. (Article ID: 2260)
Kovác P
Synthesis of ligands related to the O-specific antigen of Shigella dysenteriae type 1. Part 5. di and tri-saccharide glycosyl donors for the synthesis of fragments of the O-specific antigen of Shigella dysenteriae type 1
Carbohydrate Research 245 (1993)
219-231
Methyl O-(2,4-di-O-benzoyl-3-O-bromoacetyl-α-l-rhamnopyranosyl)-(1 → 3)-2,4-di-O-benzoyl-α-l-rhamnopyranoside was treated with dichloromethyl methyl ether and ZnCl2 to give O-(2,4-di-O-benzoyl-3-O-bromoacetyl-α-l-rhamnopyranosyl)-(1 → 3)-2,4-di-O-benzoyl-α-l-rhamnopyranosyl chloride. Similar treatment of methyl O-(3,4-,6-tri-O-acetyl-2-azido-2-deoxy-α-d-glycopyranosyl)-(1 → →3)-2,4-di-O-benzoyl-α-l-rhamnopyranoside (13) gave crystalline O-(3,4,6-tri-O-acetyl-2-azido-2-deoxy-α-d-glucopyranosyl)-(1 → 3)-2,4-di-O-benzoyl-α-l-rhamnopyranosyl chloride (14), which was also obtained by treatment of methyl O-(3,4,6-tri-O-acetyl-2-azido-2-deoxoy-α-d-glucopyranosyl)-(1 → 3)-2,4-di-O-benzoyl-1-thio-α,l-rhamnopyranoside (12) with chlorine. In contrast to the conversion 12 → 14, which was stereospecific, the reaction of methyl O-(3,4,6-tri-O-acetyl-2-azido-2-deoxy-α-d-glucopyranosyl)-(1 → 3)-(O-2,4-di-O-benzoyl-α-l-rhamnopyranosyl)-(1 → 3)-2,4-di-O-benzoyl-1-thio-α-l-rhamnopyranoside with chlorine gave a mixture of the corresponding α-(16) and β-(17) glycosyl chlorides. Condensation of the mixed chlorides 16 and 17 with 1,3,4,6-tetra-O-acetyl-α-d-galactopyranose, followed by reduction-acetylation of the product, gave a fully protected derivative of the tetrasaccharide α-d-Glcp NAc-(1 → 3)-α-l-Rhap-(1 → 3)-α-l-Rhap-(1 → 2)-α-d-Galp.
Publication DOI: 10.1016/0008-6215(93)80073-NJournal NLM ID: 0043535Publisher: Elsevier
Institutions: NIDDK, National Institutes of Health, Bethesda, MD, USA
Methods: chemical synthesis
The publication contains the following compound(s):
- Compound ID: 267
|
-3)-a-L-Rhap-(1-3)-a-L-Rhap-(1-2)-a-D-Galp-(1-3)-a-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G76746EO, GlycomeDB:
6223
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4. (Article ID: 2261)
Gray JSS, Brand JM, Koerner TAW, Montgomery R
Structure of an extracellular polysaccharide produced by Erwinia chrysanthemi
Carbohydrate Research 245 (1993)
271-287
Erwinia chrysanthemi pv zeae strain SR260, a phytopathogen of corn, produced from lactose an acidic extracellular polysaccharide which was purified and found to consist of L-rhamnose, D-mannose, D-glucose, and D-glucuronic acid in the ratio of 3:1:1:1. A combination of chemical (carboxyl-group reduction, methylation analysis, periodate oxidation, Smith degradation, and lithium-ethylenediamine degradation) and physical (1 and 2D NMR spectroscopy) methods revealed that the polysaccharide is composed of a hexasaccharide repeating unit 1: [formula: see text]
NCBI PubMed ID: 8370026Publication DOI: 10.1016/0008-6215(93)80077-RJournal NLM ID: 0043535Publisher: Elsevier
Institutions: Department of Biochemistry, University of Fort Hare, Alice, South Africa
Methods: 13C NMR, 1H NMR, methylation, periodate oxidation, NMR-2D, carboxyl reduction, Smith degradation, Li/ethylenediamine degradation
The publication contains the following compound(s):
- Compound ID: 1769
|
a-L-Rhap-(1-3)-a-L-Rhap-(1-4)-a-D-GlcpA-(1-3)-+
|
-3)-b-D-Glcp-(1-4)-a-D-Manp-(1-3)-a-L-Rhap-(1- |
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Structure type: polymer chemical repeating unit
Compound class: EPS
Reference(s) to other database(s): GTC:G92334KP, GlycomeDB:
6432, CCSD:
39696, CBank-STR:14226
- Compound ID: 5412
Structure type: polymer chemical repeating unit
Compound class: EPS
Reference(s) to other database(s): GTC:G03567CD, GlycomeDB:
6433
- Compound ID: 5413
Structure type: oligomer
Compound class: EPS
Reference(s) to other database(s): GTC:G97921YA, GlycomeDB:
16441
- Compound ID: 5414
Structure type: oligomer
Compound class: EPS
Reference(s) to other database(s): GTC:G66029TW, GlycomeDB:
6435
- Compound ID: 5415
Structure type: oligomer
Compound class: EPS
Reference(s) to other database(s): GTC:G64342TH, GlycomeDB:
6436
- Compound ID: 5416
Structure type: oligomer
Compound class: EPS
Reference(s) to other database(s): GTC:G00592UL, GlycomeDB:
6436
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