Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Host organism: Homo sapiens
Associated disease: nosocomial infections [ICD11:
XB25 
];
infection due to Klebsiella pneumoniae [ICD11:
XN741 
]
The structure was elucidated in this paperPublication DOI: 10.1038/s41598-017-06682-2Journal NLM ID: 101563288Publisher: London: Nature Publishing Group
Correspondence: valeria.szijarto

arsanis.com
Institutions: Arsanis Biosciences GmbH, Vienna, Austria, Laboratory of Microbial Immunochemistry and Vaccines, Department of Immunochemistry, Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Rudolfa Weigla 12, 53-114, Wroclaw, Poland, GATC Biotech AG, Jakob-Stadler-Platz 7, 78467, Konstanz, Germany
Klebsiella pneumoniae is responsible for nosocomial infections causing significant morbidity and mortality. Treatment of newly emerging multi-drug resistant strains is hampered due to severely limited antibiotic choices. Passive immunization targeting LPS O-antigens has been proposed as an alternative therapeutic option, given the limited variability of Klebsiella O-antigens. Here we report that the O3 serogroup, previously considered to have uniform O-antigen built of mannan, represents three different subtypes differing in the number of mannose residues within the O-antigen repeating units. Genetic analysis of the genes encoding mannose polymerization revealed differences that underline the observed structural alterations. The O3 variants represent antigenically different types based on the different reactivity pattern of murine monoclonal antibodies raised against a K. pneumoniae O3 strain. Typing of a collection of K. pneumoniae O3 clinical isolates showed that strains expressing the novel O3b antigen, the tri-mannose form, were more prevalent than those having the penta-mannose form, traditionally called O3, while the tetra-mannose variant, termed here O3a, seems to be rare. A monoclonal antibody cross-reacting with all three O3 sub-serogroups was also selected and shown to bind to the surface of various K. pneumoniae strains expressing different O3 subtypes and capsular antigens.
O-antigen, monoclonal antibodies, vaccines, Klebsiella pneumoniae, K.pneumoniae O3
Structure type: polymer chemical repeating unit
Location inside paper: fig.3c, table 1
Trivial name: mannose homopolysaccharide
Compound class: O-polysaccharide, O-antigen
Contained glycoepitopes: IEDB_115576,IEDB_130701,IEDB_136104,IEDB_140116,IEDB_141111,IEDB_141795,IEDB_141830,IEDB_143632,IEDB_144983,IEDB_152206,IEDB_153756,IEDB_164174,IEDB_164175,IEDB_164176,IEDB_164480,IEDB_174840,IEDB_241100,IEDB_76933,IEDB_983930,SB_136,SB_196,SB_197,SB_44,SB_67,SB_72
Methods: gel filtration, 13C NMR, 1H NMR, NMR-2D, methylation, PCR, DNA sequencing, SDS-PAGE, sugar analysis, ELISA, MALDI-TOF MS, immunoblotting, immunization, flow cytometry analysis, mild acidic hydrolysis, biotinylation
Biological activity: serological data
Comments, role: repeating unit of the O-PS isolated from K. pneumoniae 5505∆cps; published polymerization frame was shifted for conformity with other records.
Related record ID(s): 11901, 12089, 12090, 12091, 12093
NCBI Taxonomy refs (TaxIDs): 573Reference(s) to other database(s): GTC:G87424QV, GlycomeDB:
668, CCSD:
47538
Show glycosyltransferases
NMR conditions: in D2O at 298 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
2,2,2,3 aDManp 102.9 70.4 79.2 66.9 74.2 61.8
2,2,2 aDManp 102.9 70.4 78.8 66.9 74.2 61.9
2,2 aDManp 101.4 79.3 70.8 67.8 74.1 61.8
2 aDManp 101.4 79.5 70.8 67.8 74.1 61.8
aDManp 101.4 79.5 70.8 67.7 74.1 61.8
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
2,2,2,3 aDManp 5.11 4.21 3.98 3.75 3.81 3.73-3.90
2,2,2 aDManp 5.03 4.21 3.93 3.75 3.79 3.73-3.88
2,2 aDManp 5.29 4.10 3.94 3.69 3.74 3.74-3.84
2 aDManp 5.29 4.08 3.94 3.69 3.73 3.74-3.84
aDManp 5.37 4.07 3.98 3.68 3.78 3.74-3.89
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
2,2,2,3 aDManp 102.9/5.11 70.4/4.21 79.2/3.98 66.9/3.75 74.2/3.81 61.8/3.73-3.90
2,2,2 aDManp 102.9/5.03 70.4/4.21 78.8/3.93 66.9/3.75 74.2/3.79 61.9/3.73-3.88
2,2 aDManp 101.4/5.29 79.3/4.10 70.8/3.94 67.8/3.69 74.1/3.74 61.8/3.74-3.84
2 aDManp 101.4/5.29 79.5/4.08 70.8/3.94 67.8/3.69 74.1/3.73 61.8/3.74-3.84
aDManp 101.4/5.37 79.5/4.07 70.8/3.98 67.7/3.68 74.1/3.78 61.8/3.74-3.89
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
2,2,2,3 | aDManp | 5.11 | 4.21 | 3.98 | 3.75 | 3.81 | 3.73 3.90 |
2,2,2 | aDManp | 5.03 | 4.21 | 3.93 | 3.75 | 3.79 | 3.73 3.88 |
2,2 | aDManp | 5.29 | 4.10 | 3.94 | 3.69 | 3.74 | 3.74 3.84 |
2 | aDManp | 5.29 | 4.08 | 3.94 | 3.69 | 3.73 | 3.74 3.84 |
| aDManp | 5.37 | 4.07 | 3.98 | 3.68 | 3.78 | 3.74 3.89 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
2,2,2,3 | aDManp | 102.9 | 70.4 | 79.2 | 66.9 | 74.2 | 61.8 |
2,2,2 | aDManp | 102.9 | 70.4 | 78.8 | 66.9 | 74.2 | 61.9 |
2,2 | aDManp | 101.4 | 79.3 | 70.8 | 67.8 | 74.1 | 61.8 |
2 | aDManp | 101.4 | 79.5 | 70.8 | 67.8 | 74.1 | 61.8 |
| aDManp | 101.4 | 79.5 | 70.8 | 67.7 | 74.1 | 61.8 |
|
There is only one chemically distinct structure: