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Taxonomic group: bacteria / Actinobacteria (Phylum: Actinobacteria)

The structure was elucidated in this paper
Publication DOI: 10.1016/S0040-4039(00)96009-X
Journal NLM ID: 2984819R
Publisher: Elsevier
Institutions: Faculty of Pharmacy, Meijo University, Nagoya, Japan

N-acetylsporaviridins (N-Ac-SVD) are composed of six components whose molecular weights are all about 2200. Treatment of each component of N-Ac-SVD with 1.8-diazabicyclo [5,4,0] undesen-7 (DBU) gave two pseudoaglycones and one of three viridopentaoses A, B and C.

Structure type: oligomer
Location inside paper: fig. 2, viridopentaose A
Trivial name: viridopentaose A

Methods: 13C NMR, IR, DBU treatment, SIMS
Comments, role: Parent molecule: sporaviridin;

Related record ID(s): 148952, 148953
NCBI Taxonomy refs (TaxIDs): 47990
Reference(s) to other database(s): GTC:G59085AM, CCSD:17812, CBank-STR:10061
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There are 2 chemically distinct structures. Please, select:

CC(=O)N[C@@H]1C[C@H](O[C@@H]2[C@@H](O)[C@H](O[C@H]3[C@H](O[C@H]4C[C@@H](NC(C)=O)[C@H](O)[C@@H](C)O4)[C@@H](O[C@@H]4O[C@H](C)[C@@H](O)[C@H](O)[C@H]4O)C(O)O[C@@H]3C)O[C@H](C)[C@H]2O)O[C@H](C)[C@H]1O

SVG MW SMILES 3D mol Ionize

Structure type: oligomer
Location inside paper: fig. 2, viridopentaose B
Trivial name: viridopentaose B

Methods: 13C NMR, IR, DBU treatment, SIMS
Comments, role: Parent molecule: sporaviridin;

Related record ID(s): 148951, 148953
NCBI Taxonomy refs (TaxIDs): 47990
Reference(s) to other database(s): GTC:G99541OQ, CCSD:17814, CBank-STR:10077
Show glycosyltransferases

There are 2 chemically distinct structures. Please, select:

CC(=O)N[C@H]1[C@H](O)[C@@H](O)[C@H](O[C@H]2C(O)O[C@H](C)[C@@H](O[C@@H]3O[C@H](C)[C@@H](O)[C@H](O[C@H]4C[C@@H](NC(C)=O)[C@H](O)[C@@H](C)O4)[C@H]3O)[C@@H]2O[C@H]2C[C@@H](NC(C)=O)[C@H](O)[C@@H](C)O2)O[C@@H]1C

SVG MW SMILES 3D mol Ionize

Structure type: oligomer
Location inside paper: fig. 2, viridopentaose C
Trivial name: viridopentaose C
Contained glycoepitopes: IEDB_142488,IEDB_146664,IEDB_983931,SB_192

Methods: 13C NMR, IR, DBU treatment, SIMS
Comments, role: Parent molecule: sporaviridin;

Related record ID(s): 148951, 148952
NCBI Taxonomy refs (TaxIDs): 47990
Reference(s) to other database(s): GTC:G12950PL, CCSD:17813, CBank-STR:10035
Show glycosyltransferases

There are 2 chemically distinct structures. Please, select:

CC(=O)N[C@@H]1C[C@H](O[C@@H]2[C@@H](O)[C@H](O[C@H]3[C@H](O[C@H]4C[C@@H](NC(C)=O)[C@H](O)[C@@H](C)O4)[C@@H](O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)C(O)O[C@@H]3C)O[C@H](C)[C@H]2O)O[C@H](C)[C@H]1O

SVG MW SMILES 3D mol Ionize

Structure type: oligomer
Location inside paper: fig. 1
Trivial name: viridopentaose A
Contained glycoepitopes: IEDB_142488,IEDB_146664,IEDB_983931,SB_192

Methods: 13C NMR, IR, DBU treatment, SIMS
Comments, role: Parent molecule: sporaviridin

NCBI Taxonomy refs (TaxIDs): 47990
Show glycosyltransferases

There is only one chemically distinct structure:

CC1/C=C/C=C/C(O)C(C)C(O)CC(O)CC(O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)C(C)C2CC(O)C(O)C(O)(CC3OC(CCC3C)C(O)C/C=C/C(O)C(C)C(=O)OC1CC(O)CCCCC(C)C(O)C(C)CCC(O)C(C)C(C)O[C@H]1C[C@](C)(N)[C@H](O)[C@H](C)O1)O2

SVG MW SMILES 3D mol Ionize