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1. (Article ID: 1510)
Feng L, Senchenkova SN, Tao J, Shashkov AS, Liu B, Shevelev SD, Reeves P, Xu J, Knirel YA, Wang L
Structural and genetic characterization of enterohaemorrhagic Escherichia coli O145 O antigen and development of an O145 serogroup-specific PCR assay
Journal of Bacteriology 187(2) (2005)
758-764
Comparison of the O antigens of Shigella boydii types 10 and 6 by chemical analysis and nuclear magnetic resonance spectroscopy showed that their structures are similar, with the only difference being the presence or absence of d-ribofuranose, which is the immunodominant sugar in S. boydii type 10. In S. boydii type 6, a residue previously reported as α-D-GlcpA, was shown to be β-D-GlcpA as in S. boydii type 10. S. boydii types 10 and 6 are reported not to cross-react serologically, and the role of d-ribofuranose in the specificity of S. boydii was confirmed by making a mutant of type 10 that lacked d-ribofuranose. However, S. boydii type 11, which has a d-ribofuranose but with different linkage does show cross-reaction with type 10. The O-antigen gene loci of S. boydii types 10 and 6 were shown to be virtually identical except that orf8 (wbaM), which was confirmed as the ribofuranosyltransferase gene, is interrupted by IS629 in type 6. Therefore, it is proposed that the O-antigen gene cluster of S. boydii type 6 was derived from type 10 by an IS element insertion.
genetic, synthesis, antigen, structure, gene, PCR, structural, characterization, O-antigen, O antigen, Escherichia, Escherichia coli, type, function, heteropolysaccharide, assay, transporter, development
NCBI PubMed ID: 15629947Publication DOI: 10.1128/JB.187.2.758-764.2005Journal NLM ID: 2985120RPublisher: American Society for Microbiology
Correspondence: wanglei

nankai.edu.cn
Institutions: N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia, TEDA School of Biological Sciences and Biotechnology,1 and Tianjin State Laboratory of Microbial Functional Genomics, TEDA College, Nankai University, and Tianjin Biochip Corporation, TEDA, Tianjin, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing,6 People's Republic of China, School of Molecular and Microbial Biosciences, University of Sydney, Sydney, Australia
Methods: NMR, composition analysis
The publication contains the following compound(s):
- Compound ID: 4078
Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GlycomeDB:
33694
- Compound ID: 4077
Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:
33683
- Compound ID: 4079
Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GlycomeDB:
33695
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